Protein

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Genbank accession
UUJ74869.1 [GenBank]
Protein name
tail fiber protein
RBP type
TF
Evidence Phold
Probability 1,00
TSP
Evidence RBPdetect
Probability 0,88
TF
Evidence RBPdetect2
Probability 0,79
Protein sequence
MSYTFTEHTAVGSQTTYPFSFAGRDKGYIRASDIIVEVFHEGEWSITHGWVLSGTHQITFNVALPEGTKFRIRRDVAKEYPYAEFDRGVALDMKSLNNSFIHILQITQEILDGFYPEGYFVKQNVSWGGYKITDLADGTNPHDAVNKGQLDAIDRKHTEWNEQQDIAIAGLKAGMTSGISHRTVPWVTVAAGGEQVIRPPYIFESALVFLDGVLQHELSGAVTIANSTLTFSEPIRRGTEVYVLIGSRIATSSPGLHMEFNKDLDAGTTEVRIGMAFSHIDIYLDGLFQPKSTYQINGDLVTFSEGVPACHMSADVITL
Physico‐chemical
properties
protein length:319 AA
molecular weight: 35301,28470 Da
isoelectric point:5,23637
aromaticity:0,10658
hydropathy:-0,12602

Domains

Domains [InterPro]
DC_0041
STR
1–307
DC_0041
IPR011049
STR
126–153
IPR011049
G3DSA:6.10.250.2040
STR
132–185
G3DSA:6.10.250.2040
UUJ74869.1
1 319
Architecture
STR
STR 1-307 |
Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Tail Spike Domain Segmentation

Tail Spike Domain Segmentation

This protein has been segmented into three structural domains: N-terminal, central domain, and C-terminal.

Domain Layout
N-terminal
Central
C-terminal
UUJ74869.1
1 319
Domain Start End Length (AA) Confidence
N-terminal 1 317 317 0,9972
Central domain 318 317 1 0,5176
C-terminal 318 319 1 0,4577
Legend: N-terminal Central domain C-terminal
3D Structure with Domain Coloring

The structure is colored according to the domain segmentation: N-terminal (blue), Central (green), C-terminal (pink).

Domain Coloring
N-terminal
1-317
Central
318-317
C-terminal
318-319

Taxonomy

  Name Taxonomy ID Lineage
Phage Salmonella phage GRNsp03
[NCBI] 		2969991 No lineage information
Host Salmonella enteritidis
[NCBI] 		149539 cellular organisms > Bacteria > Pseudomonadati > Pseudomonadota > Gammaproteobacteria > Enterobacterales

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
UUJ74869.1 [NCBI]
Genbank nucleotide accession
OP038547.1 [NCBI]
CDS location
range 33689 -> 34648
strand -
CDS
ATGAGTTATACTTTCACAGAACACACAGCGGTAGGTTCTCAGACGACTTATCCGTTTAGCTTTGCTGGTCGCGACAAGGGTTACATTCGCGCATCAGATATTATTGTGGAAGTGTTTCATGAAGGAGAGTGGAGTATTACACACGGTTGGGTGCTATCTGGCACCCACCAGATTACCTTCAATGTAGCACTACCGGAAGGGACTAAGTTCCGCATACGTCGAGATGTAGCCAAAGAGTACCCTTACGCGGAGTTTGATAGGGGTGTGGCTCTTGATATGAAATCATTGAACAACTCATTCATTCATATCTTGCAGATTACACAAGAGATTCTTGATGGCTTCTACCCAGAAGGTTACTTCGTCAAACAGAATGTGTCTTGGGGTGGGTATAAAATCACTGACCTAGCTGATGGCACAAACCCTCACGATGCAGTGAATAAAGGGCAGCTTGACGCAATAGACAGGAAACACACTGAGTGGAATGAACAGCAAGATATTGCAATTGCTGGACTCAAGGCAGGTATGACATCAGGTATCTCTCACCGAACAGTACCTTGGGTTACGGTAGCGGCTGGTGGAGAGCAAGTGATTAGACCTCCTTACATCTTTGAATCGGCCTTGGTCTTCCTTGATGGAGTGTTGCAGCATGAACTGTCGGGTGCAGTTACTATAGCTAACAGCACTCTCACTTTCTCCGAGCCAATACGTCGTGGCACAGAAGTGTATGTATTGATAGGTAGTCGTATTGCAACATCTTCACCGGGTCTGCATATGGAGTTCAACAAGGACTTAGATGCAGGAACTACGGAGGTTAGGATTGGTATGGCGTTCTCCCATATTGATATCTACCTTGATGGCCTGTTCCAACCTAAGTCAACATATCAAATAAACGGCGATCTTGTTACATTCTCCGAGGGTGTACCAGCTTGCCACATGTCAGCGGATGTAATCACTTTATAG

Genome Context

Genome Context

Tertiary structure

PDB ID
9f9d4094279189ad4dcd8f942e3bc5e31e366009ea10acf0460149816ef64aa6
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,8468
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50

Literature

Title Authors Date PMID Source
Three novel Salmonella bacteriophage and their application in different food matrices Li,Y., Lv,P., Shi,D., Zhao,H., Yuan,X., Jin,X. and Wang,X. 2018-09 — GenBank