Protein

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Genbank accession
BAV81285.1 [GenBank]
Protein name
hypothetical protein
RBP type
TSP
Evidence DepoScope
Probability 1,00
Protein sequence
MAILFAQNECIGYPADSVNGAFGSGDPRVDNDGTTARAGYQRKDMTGYGRSAGALFPVLNRVAVEDINSGQFWIHCRMSLGNIINGTKYIRFCDESNQSAAHWTLRAQSSRTVSFTYDGNGNGASVSTPSNSTYNGVFTIDVLIDLDSDEIVFYHDEVEVHRDVVSKPTNINVQDHFNAVLVHDDDMTISEVIFTHNEDTRGWRLVDLNPDSVGTHSEFSGDIANINTIGLTSDSMSASDEALATFNHGGFPSEITSDDYEVRAVLSGIVAEATSDSRVPVATPIMVVGSDIVEAPKYLFYGRDRTLTENSENTSILELNEVNHFTGQPWTIDEVKNMEIGFKAGGLSTVATGTVGLDSGYAGIMNYRSLQTLGSFSSQVPIVLPEEGNFDKPTIYLRGLIAYTSPSTYVRIFMGTTSTGNSADGTDDGQRPESADWGNLNRVDMTVLFDDGTMHKLVGGVASSAGDGNYYYNFGSVSGATDFAAKMESHVGSGVTVGMSFY
Physico‐chemical
properties
protein length:502 AA
molecular weight: 54143,88030 Da
isoelectric point:4,46296
aromaticity:0,09363
hydropathy:-0,23785

Domains

Domains [InterPro]

No domain annotations available.

Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Tail Spike Domain Segmentation

Tail Spike Domain Segmentation

This protein has been segmented into three structural domains: N-terminal, central domain, and C-terminal.

Domain Layout
N-terminal
Central
C-terminal
BAV81285.1
1 502
Domain Start End Length (AA) Confidence
N-terminal 1 153 153 0,0009
Central domain 154 352 200 0,2167
C-terminal 353 502 149 0,9037
Legend: N-terminal Central domain C-terminal
3D Structure with Domain Coloring

The structure is colored according to the domain segmentation: N-terminal (blue), Central (green), C-terminal (pink).

Domain Coloring
N-terminal
1-153
Central
154-352
C-terminal
353-502

Taxonomy

  Name Taxonomy ID Lineage
Phage Vibrio phage VCPH
[NCBI] 		1674945 No lineage information
Host Vibrio harveyi
[NCBI] 		669 cellular organisms > Bacteria > Pseudomonadati > Pseudomonadota > Gammaproteobacteria > Vibrionales

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
BAV81285.1 [NCBI]
Genbank nucleotide accession
AP014889 [NCBI]
CDS location
range 86174 -> 87682
strand -
CDS
ATGGCAATTTTATTCGCACAAAACGAGTGTATCGGATACCCTGCTGACAGCGTTAACGGTGCATTCGGCTCAGGAGACCCACGTGTGGACAACGATGGTACAACAGCACGTGCTGGGTACCAGCGTAAGGATATGACAGGGTACGGCCGCTCCGCCGGTGCACTGTTCCCAGTTCTTAACAGGGTAGCCGTAGAAGACATTAACTCCGGTCAGTTCTGGATTCACTGCCGCATGTCTCTAGGTAATATTATTAACGGTACTAAATACATCCGATTCTGTGATGAGTCCAATCAATCTGCAGCTCACTGGACACTTAGAGCCCAGTCTAGCCGTACCGTTTCATTTACTTACGACGGTAATGGTAATGGAGCATCTGTAAGCACACCCTCTAACTCCACATATAATGGAGTATTTACTATCGACGTACTTATCGACTTAGACTCAGACGAGATCGTATTTTACCATGACGAAGTAGAAGTACATCGAGATGTGGTATCTAAACCTACCAACATCAACGTCCAAGATCACTTCAACGCTGTTCTAGTACATGACGATGATATGACGATTTCTGAGGTTATCTTTACACACAACGAGGATACCCGTGGATGGCGTCTAGTAGACCTTAACCCAGATAGCGTAGGTACACACTCTGAATTCTCAGGTGATATCGCTAACATCAACACTATCGGCCTAACTTCGGATTCAATGAGTGCTAGTGATGAAGCATTGGCTACTTTCAACCACGGTGGTTTTCCTTCTGAAATTACCTCGGACGATTATGAAGTTCGCGCTGTCCTATCGGGTATCGTGGCTGAAGCCACGTCAGACTCCAGAGTTCCGGTAGCTACCCCTATTATGGTGGTAGGTTCAGACATTGTAGAAGCACCTAAGTACCTATTCTACGGTAGGGATAGAACCCTAACAGAGAACAGCGAGAACACCTCCATCCTAGAGCTAAACGAAGTTAACCACTTCACAGGACAGCCTTGGACTATTGATGAAGTTAAGAATATGGAGATCGGATTTAAAGCTGGCGGATTATCTACTGTAGCTACTGGTACTGTAGGTTTAGATAGTGGTTACGCAGGTATTATGAACTACCGCTCACTACAAACTCTAGGTAGCTTCTCTAGCCAAGTACCTATCGTACTACCAGAAGAAGGTAATTTTGATAAGCCTACCATTTACTTGAGAGGTCTTATCGCTTACACATCCCCTAGCACGTATGTACGTATCTTTATGGGTACTACTTCCACAGGTAACAGTGCTGACGGGACGGATGATGGTCAAAGGCCAGAGTCAGCAGATTGGGGCAACCTAAACCGAGTGGATATGACCGTTCTCTTCGATGACGGTACTATGCATAAGTTAGTTGGTGGTGTTGCCTCCTCTGCAGGTGATGGTAACTACTACTACAACTTCGGTAGCGTATCTGGTGCTACAGACTTCGCTGCCAAGATGGAATCTCACGTAGGTTCAGGCGTCACTGTTGGGATGAGCTTCTACTAA

Genome Context

Genome Context

Tertiary structure

PDB ID
7070ff0a37de022cedf0d91fe4c90bf3114a004e4884910b654003cd7ad0d029
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,5012
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50

Literature

Title Authors Date PMID Source
Analysis of marine phages isolated from coral reef seawater, Okinawa, Japan Ramphul,C., Suzuki,T., Dohra,H., Casareto,B.E., Yoshinaga,K. and Suzuki,Y. 2017-10 — GenBank