Protein

View in Explore
Genbank accession
XTP78804.1 [GenBank]
Protein name
hypothetical protein
RBP type
TSP
Evidence RBPdetect
Probability 0,57
Protein sequence
MTDYTPILKLPEVAPNQNQKEDTINTALAILESAMNNVKVYTLTGAGPRNLTEDDYTRYFLHRFSGQTAAYEVTVPAALPRWFAVENAGSFAITVRCQGVTGGLPFEVPPGKIGLAVSDGSDVRTVVPQSGMGLLQDLSDVSGVPTDKQVLRYDAATSLWKPSTFTMAFTQLTDVPGSYSAQQGKLVAVNAAGTGLEFVTSASNVNDFLDLTDTPSSYAGAAGKTVKVSSGGTGLVFGSPTFLESTDTPSSYSGGANKFVRVNPGSSALIFSDVKLTDLSDGPGTYTGFGGMFLRVKNDGTGFEFNTGSGGPDNFLDLTDTPDAYTGQASKAVRVKSDVSGLEFYTPNFLLLSDTPADYSGAANKVLRVNGAGNAVVFSTLAFQDLQNVPTAQANKWLRWNPTATALINDTPTFLGLSDTPAAYTGNEGKYVYVKGDGSGLGFTATSANLSFLELNDTIDTTYDSKTDMVPIVTIVSGSPVLQLGYYAFAKLAGISLSSPTNGQILGYNSTSGLWTNIDAPEGGGGGSIGVPSYGAHPYWRLLLHATDGSTVEYGIQEIEFKHTKTGADLATGGTASASSTAEGSPDGAFDDTVGAAWFSSTAADGEWIKYHFTAPVDVRYLTLKGSQSRPNGSPSAFSVQYSDDDSVWTTAWEVTGQTGWAAGQTREFHAPIDLFFTDLADAPPSYIGQAGKALRVNTGETALEFFTPTTTLATMGDVDFTFPPTDGQFLRYDNATGKWKPYTLTSEGQKAAFRGEWSGSGENITLTFDALTIPSVLSPDAPGWTIVGQADATAGTTQALKSRPIGNSGLCYVEQTVNFVGDTPFKVRYKVSSESVDVFRILVDGSVVLTDSGNNGTFEEFSTTLSGTHTIRYQYSKDPSVAVGDDCVYISQITYKKTADTPFIYGDTVTYLGNTFFCLIDNTTETPGVGTDWSMFGGSGSGTFLGLTDTPASYSGQSLKAVRVKADETGLEFYTAATGGGGGSGGALPERTRLHRTTTQSIPSATWTAVQWDAELEDPVGAFVSSANTRITVPAGVQYARVTAYTTWNTSPTSATIGLALRRNGVEIGASGGTSIAATRTGFAESHLNLTSEWFPVTAGDYYEVYVLQNSGSAQSLNGPVTKFGENSYVQFEWDVGPAAQQYEAHAAHKGWRVIVTESQTDTYATLAELKFYDRSGTLVPTTGGKVYDTNSHGTYPASQAFDGNTATYWSSLQQTSTDLPGGPGYIFASGVDVGSFKITTTGSDFNTTNSPKNFSLQYTDDDGASWKTYAVYTNQTGWGVSEERTFTVPVVGVAANAPGGGDTTADFGSFIAGKPLANEKAIRFVVATPFTVTTGLHQGSAETAATASRTFSFAKNGVEFLTATFAAAGTVATFSANAATSFAAGDVLMITAPSTQDATLADISFTLKGTR
Physico‐chemical
properties
protein length:1413 AA
molecular weight: 148870,22840 Da
isoelectric point:4,60648
aromaticity:0,10899
hydropathy:-0,17466

Domains

Domains [InterPro]
DC_1385
ATT
1–207
DC_1385 DC_1385 DC_1385 DC_1385 DC_1385 G3DSA:2.60.120.260
DC_1385
ATT
201–240
DC_1385 DC_0349 DC_1385 IPR000421 DC_1385 IPR008979
G3DSA:2.60.120.260
STR
563–747
G3DSA:2.60.120.260 IPR000421
IPR008979
STR
570–660
IPR008979 DC_1049
IPR000421
RBD
575–673
IPR000421
XTP78804.1
1 1413
Architecture
ATT
ATT
STR
RBD
ATT 1-480 | ATT 482-1064 | STR 1181-1299 | RBD 1300-1413
Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Tail Spike Domain Segmentation

Tail Spike Domain Segmentation

This protein has been segmented into three structural domains: N-terminal, central domain, and C-terminal.

Domain Layout
N-terminal
Central
C-terminal
XTP78804.1
1 1413
Domain Start End Length (AA) Confidence
N-terminal 1 534 534 0,9828
Central domain 535 733 200 0,2205
C-terminal 734 1413 679 0,4654
Legend: N-terminal Central domain C-terminal
3D Structure with Domain Coloring

The structure is colored according to the domain segmentation: N-terminal (blue), Central (green), C-terminal (pink).

Domain Coloring
N-terminal
1-534
Central
535-733
C-terminal
734-1413

Taxonomy

  Name Taxonomy ID Lineage
Phage Caulobacter phage RBC57
[NCBI] 		3411843 No lineage information
Host Caulobacter crescentus CB15
[NCBI] 		190650 Bacteria > Proteobacteria > Alphaproteobacteria > Caulobacterales > Caulobacteraceae > Caulobacter

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
XTP78804.1 [NCBI]
Genbank nucleotide accession
PV231353 [NCBI]
CDS location
range 154750 -> 158991
strand +
CDS
ATGACCGATTACACGCCGATCCTGAAGCTCCCTGAGGTCGCGCCGAACCAAAACCAGAAGGAAGACACGATCAACACCGCGCTCGCCATCCTGGAGAGCGCGATGAACAACGTGAAGGTCTACACCCTCACCGGCGCGGGGCCGCGCAACCTCACCGAGGACGACTACACCCGCTACTTCCTGCACCGGTTCTCGGGCCAGACCGCCGCCTACGAGGTCACCGTCCCGGCCGCCCTGCCGCGTTGGTTCGCGGTCGAGAACGCCGGCAGCTTCGCCATCACCGTGCGCTGCCAGGGCGTCACCGGCGGCCTGCCGTTCGAGGTGCCGCCCGGCAAGATCGGGCTGGCGGTCTCCGATGGTTCGGACGTCCGCACCGTCGTGCCGCAGTCGGGCATGGGCCTGCTCCAGGACCTCTCGGACGTGTCGGGCGTGCCGACCGACAAACAGGTCCTGCGCTACGACGCCGCCACCAGTCTGTGGAAGCCCTCGACCTTCACGATGGCCTTCACCCAACTGACCGACGTGCCGGGCAGCTATTCGGCCCAGCAGGGCAAGCTTGTGGCGGTCAACGCCGCCGGCACGGGCCTGGAGTTCGTCACCTCGGCCTCCAACGTCAACGACTTCCTCGATCTCACCGACACGCCCAGTTCCTACGCGGGCGCGGCCGGCAAGACCGTCAAGGTCTCGTCGGGCGGCACGGGCCTCGTGTTCGGGAGCCCGACCTTCCTGGAGAGCACCGACACCCCGTCCAGCTACAGCGGCGGCGCCAACAAGTTCGTCCGGGTCAATCCCGGCTCCAGCGCCCTGATCTTCTCGGACGTCAAGCTGACCGACCTCTCGGACGGGCCGGGGACCTATACCGGCTTTGGGGGCATGTTCCTGCGCGTCAAGAACGACGGGACGGGGTTCGAATTCAACACCGGTTCGGGCGGCCCTGACAACTTCCTGGACCTGACCGACACGCCTGACGCGTACACGGGTCAGGCAAGCAAGGCCGTGCGCGTCAAATCCGACGTCTCGGGGCTGGAGTTCTATACCCCTAACTTCCTGCTGCTGTCGGACACCCCGGCTGATTACTCGGGCGCGGCCAACAAGGTCCTGCGCGTCAATGGCGCCGGCAACGCCGTCGTCTTCAGCACCTTGGCCTTCCAGGACCTCCAGAACGTCCCGACGGCCCAGGCCAACAAGTGGCTGCGCTGGAACCCGACCGCCACGGCGTTGATCAACGACACCCCGACCTTCTTGGGTCTGTCCGACACCCCGGCGGCCTATACGGGCAACGAGGGCAAGTACGTCTACGTCAAGGGGGATGGCTCGGGCCTGGGCTTCACCGCGACCTCGGCCAACCTGTCGTTCCTGGAGTTGAACGACACGATCGACACCACCTACGACTCCAAGACCGACATGGTGCCAATCGTCACCATCGTTTCGGGCTCGCCGGTCCTGCAACTGGGCTATTACGCCTTCGCCAAGCTGGCGGGGATCAGCCTGTCCTCGCCGACCAACGGGCAAATCCTCGGTTACAATTCGACCTCCGGCCTGTGGACCAACATCGACGCGCCCGAGGGCGGCGGCGGCGGCTCTATCGGCGTGCCGTCGTATGGGGCGCATCCCTATTGGCGCCTCCTCCTGCACGCCACCGACGGCTCGACCGTCGAGTACGGCATCCAGGAGATCGAGTTCAAGCACACCAAGACGGGCGCTGATCTGGCCACTGGGGGTACCGCCTCGGCGTCCTCGACGGCCGAAGGCTCGCCGGACGGGGCGTTCGACGACACCGTGGGCGCGGCGTGGTTCTCCTCGACGGCGGCGGACGGCGAGTGGATCAAGTACCACTTCACCGCGCCGGTCGATGTGCGCTACCTGACCCTGAAGGGCTCGCAGTCGCGACCCAACGGCTCGCCCTCGGCCTTCTCGGTCCAGTACAGCGACGATGACTCGGTCTGGACCACCGCCTGGGAGGTGACGGGCCAGACGGGGTGGGCGGCGGGTCAGACCCGCGAGTTCCACGCCCCGATCGACCTCTTCTTCACCGACCTCGCCGACGCCCCGCCCAGCTATATCGGGCAGGCGGGCAAGGCCCTGCGCGTCAACACCGGCGAGACGGCGCTGGAGTTCTTCACCCCCACCACGACGCTGGCGACCATGGGGGATGTCGACTTCACCTTCCCGCCGACCGATGGCCAGTTCCTGCGCTATGACAACGCGACCGGCAAGTGGAAACCCTATACGCTGACGTCCGAAGGGCAGAAGGCGGCCTTCCGGGGCGAATGGTCCGGCTCGGGCGAGAACATCACCCTGACCTTTGACGCCTTGACCATTCCGAGCGTCCTGTCGCCGGACGCGCCGGGATGGACGATCGTCGGGCAGGCCGACGCGACGGCTGGCACCACGCAGGCGCTGAAGTCGCGCCCGATCGGCAATAGCGGGCTCTGCTACGTTGAGCAGACCGTCAATTTCGTCGGCGATACGCCGTTCAAGGTGCGCTACAAGGTCTCTTCCGAATCGGTCGACGTCTTCCGCATCCTGGTCGACGGCTCGGTCGTGCTTACCGACAGCGGCAACAACGGGACGTTTGAAGAGTTCTCGACCACCCTGTCGGGTACGCACACCATCCGCTACCAGTACAGCAAGGACCCCAGCGTCGCGGTGGGGGACGACTGCGTCTATATCAGCCAGATCACCTACAAGAAGACGGCGGACACGCCGTTCATCTATGGTGACACCGTCACCTATCTCGGCAATACCTTCTTCTGCCTGATCGACAACACCACCGAGACGCCGGGCGTGGGAACCGACTGGTCGATGTTCGGCGGCTCGGGCTCGGGCACCTTCCTGGGTCTCACCGACACCCCGGCCAGCTATTCGGGACAGTCGCTCAAGGCCGTGCGGGTCAAGGCCGACGAGACGGGCCTGGAGTTCTACACCGCCGCGACGGGCGGGGGCGGTGGCTCGGGCGGCGCCCTGCCCGAGCGCACGCGCCTGCACCGCACCACCACCCAGTCGATCCCCTCGGCTACCTGGACGGCGGTCCAGTGGGATGCGGAACTGGAAGACCCGGTCGGGGCCTTCGTGTCGAGCGCTAATACACGCATCACCGTCCCGGCGGGCGTGCAGTATGCGCGGGTCACGGCCTATACGACCTGGAACACCAGCCCGACCAGCGCGACGATCGGTTTGGCGCTGCGCCGCAATGGCGTCGAAATCGGCGCCTCGGGCGGCACCAGCATCGCCGCTACCCGCACGGGTTTTGCCGAAAGCCACCTGAACCTCACCTCTGAATGGTTCCCGGTCACGGCGGGCGACTACTACGAGGTCTATGTCCTCCAGAACTCTGGCTCGGCCCAATCCCTGAACGGGCCGGTGACGAAGTTCGGCGAGAACTCCTATGTCCAGTTCGAGTGGGACGTGGGACCGGCGGCCCAGCAGTACGAAGCCCACGCCGCCCACAAGGGCTGGCGCGTGATCGTCACCGAGAGCCAAACCGACACCTACGCGACCCTGGCGGAACTGAAGTTCTACGACCGGTCCGGAACCCTGGTCCCGACGACGGGCGGCAAGGTCTACGACACCAACTCCCATGGGACCTATCCGGCCTCCCAGGCGTTCGACGGCAACACTGCCACCTACTGGTCGTCGTTGCAGCAGACCTCGACCGACCTTCCCGGCGGTCCGGGCTATATCTTCGCCTCGGGCGTCGACGTGGGGTCTTTCAAGATCACCACCACTGGCTCGGACTTCAACACCACCAACTCGCCCAAGAACTTCTCGCTGCAATATACCGACGACGATGGCGCGTCGTGGAAGACCTACGCCGTCTACACCAACCAGACGGGTTGGGGCGTCAGCGAGGAGCGCACCTTCACGGTCCCCGTCGTGGGTGTGGCGGCCAACGCACCGGGTGGGGGCGATACCACGGCCGACTTCGGCTCCTTCATCGCCGGCAAGCCCCTGGCCAATGAAAAGGCGATCCGCTTCGTGGTCGCCACCCCGTTCACGGTCACGACCGGCCTCCACCAGGGCTCGGCCGAGACGGCGGCGACGGCCTCGCGCACGTTCAGCTTCGCCAAGAATGGCGTCGAGTTCCTGACCGCGACCTTCGCGGCGGCGGGGACGGTGGCGACGTTCTCGGCCAACGCCGCCACGAGTTTTGCCGCCGGGGACGTGCTGATGATCACCGCCCCGTCGACCCAGGACGCCACCCTGGCGGACATTTCCTTCACGCTCAAGGGAACCCGATAG

Genome Context

Genome Context

Tertiary structure

PDB ID
1834cf4e10dc12cf141b590036d4091e90efb6f49472fcb2084de524a5063b61
ColabFold
Source ColabFold
Method ColabFold
Resolution 0,7033
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50

Literature

Title Authors Date PMID Source
Dolichocephalovirinae Phages Are Present as Episomal Pseu-dolysogens Within a Wide Range of Soil Bacteria Mohammadi,T. and Ely,B. 2025-05-28 — GenBank