Protein

View in Explore
Genbank accession
UPW36208.1 [GenBank]
Protein name
tail fiber protein
RBP type
TF
Evidence Phold
Probability 1,00
TSP
Evidence DepoScope
Probability 1,00
TSP
Evidence RBPdetect
Probability 0,90
TSP
Evidence RBPdetect2
Probability 0,93
Protein sequence
MLPVSFFTKDGDGKNGITIGNGGTEPSWDIRTVNGLDASGNAWFGVFQYVKAKAGSLYITGGVRANDNGYCGLGLSYAQGGEISGFTCNGNGNNGLDIFETNGNMKIHSGEASLNGVDGVFACGNGTGPKISGVTAMNNKRIGILAYGRTEAPTGFDVTNCNLLNNGLNSLCYTGIRSGSIADNVMGGTKSWSLKMEGKNGLLNPMGLTVCNNTFEVESVSGDIFANIGGYTDGGNPGIINVTDNKYNDRNPVHSIASYNRSKSLFRPSGRMGFTSAYTAAVGGSISVSLSFIKPDSNAADISSGIVEMQIGDTATMLAATTVSSATRNAGVELYNGATTNGKIIAAAAYGALTYSFTSTTAKTVYLKVRSPWGDAIISLTWS
Physico‐chemical
properties
protein length:383 AA
molecular weight: 39684,81670 Da
isoelectric point:6,72487
aromaticity:0,08616
hydropathy:-0,10574

Domains

Domains [InterPro]
IPR012334
STR
4–265
IPR012334
IPR011050
STR
21–243
IPR011050
IPR011050
STR
35–243
IPR011050
DC_1856
RBD
237–383
DC_1856
UPW36208.1
1 383
Architecture
STR
RBD
STR 4-265 | RBD 266-383
Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Tail Spike Domain Segmentation

Tail Spike Domain Segmentation

This protein has been segmented into three structural domains: N-terminal, central domain, and C-terminal.

Domain Layout
N-terminal
Central
C-terminal
UPW36208.1
1 383
Domain Start End Length (AA) Confidence
N-terminal 1 10 10 0,0065
Central domain 11 273 264 0,9926
C-terminal 274 383 109 0,9873
Legend: N-terminal Central domain C-terminal
3D Structure with Domain Coloring

The structure is colored according to the domain segmentation: N-terminal (blue), Central (green), C-terminal (pink).

Domain Coloring
N-terminal
1-10
Central
11-273
C-terminal
274-383

Taxonomy

  Name Taxonomy ID Lineage
Phage Klebsiella phage K751
[NCBI] 		2930395 Viruses > Duplodnaviria > Heunggongvirae > Uroviricota > Caudoviricetes
Host Klebsiella pneumoniae
[NCBI] 		573 cellular organisms > Bacteria > Pseudomonadati > Pseudomonadota > Gammaproteobacteria > Enterobacterales

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
UPW36208.1 [NCBI]
Genbank nucleotide accession
ON202820.1 [NCBI]
CDS location
range 155870 -> 157021
strand +
CDS
ATGCTGCCGGTCAGTTTTTTTACTAAGGATGGGGACGGTAAGAACGGTATCACTATTGGTAATGGTGGTACTGAACCTAGTTGGGATATCCGTACTGTTAACGGTTTAGATGCCAGCGGTAATGCATGGTTTGGAGTATTTCAATACGTTAAAGCCAAGGCAGGTAGCCTCTACATTACAGGTGGAGTTCGGGCTAATGACAATGGTTACTGCGGATTGGGATTAAGTTACGCACAGGGAGGTGAGATTTCAGGCTTTACTTGTAATGGCAACGGTAATAACGGCTTAGACATTTTTGAGACAAATGGCAACATGAAGATTCACTCAGGTGAAGCTAGTCTTAATGGTGTTGATGGGGTGTTTGCTTGTGGTAATGGTACTGGTCCAAAAATCAGTGGAGTTACTGCAATGAATAATAAACGCATTGGCATTCTTGCATACGGTCGCACGGAAGCCCCTACAGGGTTTGACGTGACCAACTGTAATTTATTGAATAATGGTCTCAATAGTCTTTGTTATACCGGTATACGCTCTGGCTCTATAGCAGATAATGTAATGGGTGGTACTAAATCCTGGTCTTTAAAAATGGAAGGTAAGAACGGTTTACTTAACCCAATGGGCCTAACTGTCTGCAATAACACCTTTGAAGTGGAGTCAGTCTCTGGTGATATATTTGCTAATATCGGTGGTTACACTGATGGTGGAAACCCCGGTATTATTAATGTCACCGACAACAAATATAATGATCGGAACCCAGTCCATTCTATAGCGTCCTATAATCGTTCTAAAAGTTTGTTTAGACCTTCTGGAAGAATGGGGTTTACTTCTGCGTATACTGCTGCTGTCGGTGGATCTATTAGTGTTTCTCTATCTTTCATAAAACCAGATTCCAACGCAGCTGATATTTCATCTGGGATAGTAGAGATGCAAATAGGTGACACAGCTACTATGTTAGCAGCTACAACCGTCAGTAGCGCGACCAGAAATGCTGGAGTTGAATTATATAACGGAGCCACTACAAACGGGAAAATCATAGCTGCCGCCGCTTATGGGGCTTTGACTTATTCCTTTACTTCCACTACAGCGAAAACTGTTTATCTCAAGGTACGATCTCCTTGGGGTGATGCGATAATTTCATTAACTTGGAGTTAA

Genome Context

Genome Context

Tertiary structure

PDB ID
cc0ed54552b734360fb9afa12b944e3724fa7d19062f182b52672298934f45e7
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,7411
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50

Literature

Title Authors Date PMID Source
Phenotypic and genotypic characterization of lytic phages against Klebsiella pneumoniae resistant to carbapenems Nolivos,K.V., Cabezas-Mera,F.S., Tisalema,E.E., Reyes,J.A., Fierro,I.M. and Pazmino,L.A. 2023-06-01 — GenBank