Protein

View in Explore
Genbank accession
AUR99453.1 [GenBank]
Protein name
hint domain protein
RBP type
TSP
Evidence DepoScope
Probability 1,00
Protein sequence
MPTSQILTDAEIEHQQYLIRYSQGKANTIKPFLRDVVAYLEARLAREGESIASKKKLNALLKDTQKKMNTIYTDWEKSEFNPMFRDVVKSELEFQKGATDAVVAGYNSAVPAQKQVLSAANNTPLLIGAKGGAVDFSKYTKSWKPNEIERVNSRIVSGFYAGETTSEITRGITGLKSQNYANGILNMSRANIQSMVKTTATHLSMEAQAEFNKENSDLIIGMQWVSTLDSNTSDICRGRDGEIYYFSEYGQNYPRPPAHPNACLKGTMITTDKGLVAIEDIKVGDNVLTHTGRYMPVTTVMARKHTEGVRTLIDNFGRSVSLTDEHPILTLADGWKVTSDVKVGDVLFNNSKEFIQVDDSRSSKVTNAVLLDSHNIVTEATKELISYGIFSHSAGVSSAVNLDNGVTDNKVCDIDFTNDKLKLVIDSGRIERVNNDTLMLGGLILEVNGKAVSYLDFSVPVVGGVVSLHSLAGFFRASLVRFGIGSAPVGIASRFWGELLAGVNGVLAASGFNSKLDASLSDSVIREIVFSLNESKAFAINPVLSANKLDNSFIADHDCAPNDLWFNSTITSIVEYHIDEYVYNISVAEDETYIADGVLVHNCRSTMTPVLSPEYDFLTESRTRPAVSDGEAQEVSGKTTYYEWLNRQPAKVVDEALGPEKGKIFRNAGLTPEEYKKAATDQFGNALSIEQMTKKNNDINNYLQKQQ
Physico‐chemical
properties
protein length:707 AA
molecular weight: 77741,60250 Da
isoelectric point:5,44059
aromaticity:0,08062
hydropathy:-0,27284

Domains

Domains [InterPro]
DC_1147
ATT
1–150
DC_1147 IPR003587 IPR006142 G3DSA:2.170.16.10
G3DSA:2.170.16.10
RBD
261–387
G3DSA:2.170.16.10 DC_0892
G3DSA:2.170.16.10
RBD
261–395
G3DSA:2.170.16.10 cd00081
cd00081
RBD
263–392
cd00081 IPR003586
IPR036844
STR
265–603
IPR036844
PF14890
Unmapped
297–602
PF14890
IPR006142
Unmapped
317–330
IPR006142 IPR006142 IPR006142
IPR030934
RBD
581–603
IPR030934
AUR99453.1
1 707
Architecture
ATT
STR
RBD
ATT 1-150 | STR 261-608 | RBD 609-707
Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Tail Spike Domain Segmentation

Tail Spike Domain Segmentation

This protein has been segmented into three structural domains: N-terminal, central domain, and C-terminal.

Domain Layout
N-terminal
Central
C-terminal
AUR99453.1
1 707
Domain Start End Length (AA) Confidence
N-terminal 1 272 272 0,9348
Central domain 273 587 316 0,4105
C-terminal 588 707 119 0,6404
Legend: N-terminal Central domain C-terminal
3D Structure with Domain Coloring

The structure is colored according to the domain segmentation: N-terminal (blue), Central (green), C-terminal (pink).

Domain Coloring
N-terminal
1-272
Central
273-587
C-terminal
588-707

Taxonomy

  Name Taxonomy ID Lineage
Phage Vibrio phage 1.266.O._10N.286.52.F9
[NCBI] 		1881239 Viruses > Duplodnaviria > Heunggongvirae > Uroviricota > Caudoviricetes
Host Vibrio breoganii
[NCBI] 		553239 cellular organisms > Bacteria > Pseudomonadati > Pseudomonadota > Gammaproteobacteria > Vibrionales

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
AUR99453.1 [NCBI]
Genbank nucleotide accession
MG592631 [NCBI]
CDS location
range 3167 -> 5290
strand +
CDS
ATGCCGACTAGCCAAATCTTAACAGACGCAGAAATAGAGCATCAGCAATACTTAATCCGCTATTCACAAGGAAAGGCGAACACAATCAAGCCTTTCCTTCGTGATGTTGTTGCGTACCTAGAGGCACGACTCGCTAGGGAGGGCGAATCCATTGCCTCTAAGAAGAAACTCAATGCGCTACTAAAAGACACGCAGAAAAAGATGAACACCATTTACACGGATTGGGAGAAGTCAGAGTTTAATCCTATGTTCCGTGATGTGGTTAAGTCTGAGTTAGAGTTTCAGAAGGGCGCGACTGATGCGGTAGTTGCCGGATATAACTCAGCAGTGCCAGCACAAAAGCAAGTATTGAGTGCTGCGAATAACACTCCATTGCTGATAGGTGCTAAAGGTGGAGCGGTTGATTTCTCTAAGTACACAAAGAGCTGGAAGCCTAACGAAATTGAGCGCGTTAACTCTCGTATTGTGTCAGGGTTCTATGCGGGTGAAACAACTTCTGAAATAACTAGAGGCATTACCGGATTAAAGTCTCAGAACTACGCTAACGGCATTTTAAACATGTCTAGAGCTAACATTCAGAGCATGGTCAAGACTACGGCTACGCATCTATCTATGGAGGCGCAAGCGGAGTTCAACAAAGAGAACTCAGATTTAATCATCGGTATGCAGTGGGTATCAACTCTTGATTCTAATACGTCTGATATCTGTAGAGGTCGAGATGGTGAGATCTATTACTTTAGCGAGTACGGGCAGAATTACCCTAGGCCACCTGCCCACCCTAACGCTTGCTTGAAAGGAACTATGATTACAACTGATAAAGGATTGGTTGCGATTGAGGATATCAAGGTCGGTGATAATGTGCTGACTCACACTGGCAGGTACATGCCTGTAACTACCGTAATGGCGAGAAAGCACACAGAAGGAGTGAGAACTCTAATAGATAACTTCGGTCGCAGTGTCAGCCTCACGGACGAGCACCCGATACTCACGCTTGCGGATGGGTGGAAAGTTACTAGTGATGTTAAGGTTGGTGACGTACTGTTCAATAACTCTAAAGAGTTTATTCAGGTTGATGACTCCAGATCCTCTAAGGTCACAAACGCAGTCTTGCTTGACTCGCACAACATTGTAACCGAGGCCACAAAGGAACTTATCTCTTATGGCATCTTTAGCCATTCTGCTGGCGTGTCCTCTGCCGTCAATCTCGATAATGGTGTCACCGATAACAAAGTCTGCGATATAGATTTCACCAACGACAAGCTGAAACTCGTAATCGACTCCGGCAGAATTGAGCGCGTCAATAACGATACTCTCATGCTTGGTGGGCTTATCCTTGAGGTTAATGGCAAGGCTGTTAGTTATCTTGACTTTAGTGTCCCAGTCGTGGGAGGGGTTGTTAGTCTTCATTCTCTTGCTGGATTCTTCCGAGCATCGCTTGTGCGCTTCGGGATTGGTTCTGCTCCAGTGGGAATCGCCAGTAGGTTTTGGGGTGAACTTCTTGCTGGAGTTAATGGAGTCCTTGCGGCTTCTGGTTTCAATTCCAAGCTTGATGCATCGCTTTCTGATAGTGTCATTAGAGAGATTGTTTTCTCTCTCAATGAGTCTAAGGCTTTTGCCATTAATCCAGTGCTCAGTGCTAACAAGCTCGATAACTCTTTCATCGCTGATCATGATTGTGCTCCTAATGATTTGTGGTTTAACTCTACTATCACTTCAATTGTAGAATATCACATAGATGAATACGTGTACAACATCTCAGTTGCAGAAGATGAAACATACATAGCTGATGGTGTGCTTGTTCACAATTGCCGCAGTACAATGACGCCGGTCTTATCGCCTGAATATGACTTCCTCACAGAATCTCGAACACGTCCGGCTGTTAGTGATGGCGAGGCGCAAGAGGTATCAGGAAAGACGACTTATTACGAGTGGCTAAATAGACAACCTGCAAAAGTGGTAGATGAAGCGCTAGGCCCAGAGAAAGGAAAGATATTCCGCAATGCTGGATTAACACCAGAGGAGTACAAAAAGGCTGCAACGGATCAGTTTGGCAACGCTCTAAGTATCGAGCAGATGACCAAAAAGAACAATGACATAAACAATTACCTACAGAAACAACAATAG

Genome Context

Genome Context

Tertiary structure

PDB ID
9abfd77a48325d5c6308f60b25d81b2efc7bf0ff76873a87b667ae26810b04e0
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,6828
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50

Literature

Title Authors Date PMID Source
A major lineage of nontailed dsDNA viruses as unrecognized killers of marine bacteria Kauffman,K.M., Hussain,F.A., Yang,J., Arevalo,P., Brown,J.M., Chang,W.K., VanInsberghe,D., Elsherbini,J., Cutler,M.B., Kelly,L. and Polz,M.F. 2018-01-24 — GenBank