Protein

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Genbank accession
QXV74997.1 [GenBank]
Protein name
tail fiber protein host specificity
RBP type
TF
Evidence Phold
Probability 1,00
TSP
Evidence DepoScope
Probability 0,93
TF
Evidence RBPdetect
Probability 0,86
Protein sequence
MSLHVKQAGAWSTVQNLYVNQSGVWVPVQYAYVKNAGAWVQYYSSEVVVTLAANTNNVNISTLFTSAVWTSSTNKRVVINSGVTIGSTSSGTPAMRTGVSWGGLLTIENAGTIQGAGGAGNSGAGGHALIADASGVIVKNTGIIRSGGGGGGHGGNGGNGYYTYTISERPAYAGYPANGSSRYYWQTQNGTSIDSAYWNNANLFGGNVDSPVTVNGFTYTRGAQRASYTSGSSSFKVFEISRSYQATAYTSGGTGGDGGRGQGADGSAAAGSAGSGGGTNAGTGGTGGTGGAYGANGSTGNSGSAGNNGSGTAGTTGGIAGISYNVANISMTNTGTITGRTS
Physico‐chemical
properties
protein length:342 AA
molecular weight: 33705,85420 Da
isoelectric point:9,41788
aromaticity:0,09064
hydropathy:-0,24357

Domains

Domains [InterPro]
DC_1762
ATT
1–160
DC_1762 DC_0422
IPR007932
RBD
46–207
IPR007932
QXV74997.1
1 342
Architecture
ATT
RBD
ATT 1-160 | RBD 161-342
Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Tail Spike Domain Segmentation

Tail Spike Domain Segmentation

This protein has been segmented into three structural domains: N-terminal, central domain, and C-terminal.

Domain Layout
N-terminal
Central
C-terminal
QXV74997.1
1 342
Domain Start End Length (AA) Confidence
N-terminal 1 60 60 0,1062
Central domain 61 264 205 0,9509
C-terminal 265 342 77 0,1690
Legend: N-terminal Central domain C-terminal
3D Structure with Domain Coloring

The structure is colored according to the domain segmentation: N-terminal (blue), Central (green), C-terminal (pink).

Domain Coloring
N-terminal
1-60
Central
61-264
C-terminal
265-342

Taxonomy

  Name Taxonomy ID Lineage
Phage Rhizobium phage RHEph27
[NCBI] 		2836137 Viruses > Duplodnaviria > Heunggongvirae > Uroviricota > Caudoviricetes
Host No host information

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
QXV74997.1 [NCBI]
Genbank nucleotide accession
MW980074.1 [NCBI]
CDS location
range 38505 -> 39533
strand +
CDS
ATGAGCCTGCATGTAAAGCAAGCAGGAGCATGGTCCACAGTGCAGAACCTGTACGTCAACCAATCTGGCGTATGGGTTCCTGTACAATACGCGTATGTAAAGAACGCGGGCGCATGGGTGCAATACTATTCGTCGGAAGTAGTCGTTACTCTAGCGGCGAACACCAATAACGTCAACATATCGACGTTGTTCACCTCTGCGGTATGGACTAGCTCAACGAACAAGCGTGTCGTCATTAACTCTGGCGTCACCATTGGCTCTACCTCATCTGGCACTCCCGCAATGCGTACGGGTGTAAGTTGGGGCGGGCTACTGACAATCGAGAATGCCGGTACTATCCAAGGTGCTGGCGGTGCTGGCAACTCAGGTGCTGGCGGTCATGCACTGATAGCTGATGCATCAGGAGTAATCGTCAAGAATACCGGCATTATCCGCTCTGGCGGTGGTGGTGGTGGTCACGGCGGTAACGGTGGCAATGGCTACTACACCTACACCATATCGGAGAGACCGGCTTATGCTGGTTATCCGGCGAACGGCAGCAGCCGTTACTACTGGCAAACTCAGAACGGCACAAGCATCGACAGCGCGTACTGGAACAATGCCAACCTATTCGGCGGTAACGTAGACAGTCCGGTTACGGTTAATGGTTTCACGTACACTCGCGGCGCACAGCGCGCAAGCTATACGAGTGGAAGTAGCTCATTCAAAGTATTCGAAATCAGCCGGTCGTACCAAGCCACAGCCTACACTTCGGGTGGTACAGGTGGCGACGGCGGGCGCGGCCAGGGCGCAGACGGATCGGCAGCAGCCGGTTCTGCGGGTTCCGGTGGCGGCACTAATGCTGGTACTGGCGGTACTGGCGGAACGGGTGGAGCGTATGGCGCGAACGGCTCAACGGGCAATAGCGGCAGTGCTGGCAATAACGGCTCTGGTACAGCCGGAACTACCGGCGGCATCGCTGGTATTAGCTATAACGTTGCTAACATTAGCATGACAAACACAGGCACAATCACGGGACGAACATCATGA

Genome Context

Genome Context

Tertiary structure

PDB ID
995c4536d14bb55237c70a6cac5aeea0d5d94bf537f47d1a727a536e12bbc288
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,7755
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50

Literature

Title Authors Date PMID Source
The Hidden Diversity of Double-Stranded DNA Phages in the Symbiotic Bacterium Rhizobium Santamaria,R.I., Bustos,P., Cauwenberghe,J.V. and Gonzalez,V. 2011 — GenBank