Protein

View in Explore
Genbank accession
QNH71623.1 [GenBank]
Protein name
hypothetical protein
RBP type
TSP
Evidence DepoScope
Probability 1,00
TSP
Evidence RBPdetect2
Probability 0,91
Protein sequence
MADRRFINQFPSASPEAIATGNLIIEANGQEYRATTAVLGGVHLFFLDEDNRTPVVQFRLTSPGRTVENVPVTLTVTAPNGTVTTKSATTDALGNGQYDFTGILARGQTYTIEARAAIYLTATTQKTINALSAPIDPVTATSTGKVGDTITLGALNFDGNPTSFRYRCLRGSSYVIPGAEASTYTLQPDDDGDLITIQVQATNAGGDSPWYSANGIGPVSNKTSVLLAAPVISGSTAPGGRLTVSSPGSASENAVVKSDEWQINQAKIPALKAPLTRYLAATTGVSAPTGYPDGNNHHGVGLSSAAYAGTNTFSFSVGISATENDYIATQIGASGGNEGPQPYTLAIRHLNTNSLIRIKMFAAKYRGGVLVEEVQMSKVGATAGQELAELAATANSTSQWTLTHDFGEWLEGDWLVFRQQARNTSASSTNNYQWDSRAGASYAILPIGNVQDLQKTLSSFTTRADMAGKKVRLARTFSNRNNDVVAYSNEITLAAAVAQTQAPVNTALPTIYAVSDRSNTTWQIDLGAWSNQPTGYTVQWQANGVDIPGATLMSYKPTSAQEGQTITCVVTATNGVGAPTSVVTAGKIVQTAAAFWNIATGNDLNDGLTAEFAKQNLTGTDTIPSGATAILSGDFGTRLKLGSFRTYEGLGAALTSIGSTSIAYAIDHYTDDGSLGRSNVIIRKMRITSGDRAIMARQGSNWVIEDVVIDSAGYNTTGPAENASGIYFYRNNGITLRRVQLLQVMSDGLYSDTNDKVLIEDCVFLPVNTAEGDTIQTRADRNDSNGAPGPHQKGFLMRGTFLDMHSRKTSSGKGCLVTNMHDYILIHDNIMDGNNFVHGTDEGDNQVFCRNTSRYARKNSYSFGYGIGGYDNQPASHNHHIYDNSWYDFNRALSFTGISVTGYTGTKSGRVDIVAHDETIVKCANGVRIDRPTSGRFRGFVFHNVSKSLDRTLTTLPVGGDIQAFLWSDHYIYNGSIAEPPKVFARAQITGNRVSGAVLSGPDTIFDTAAVLAAFPTAQITRSYQWRRHKPAVQWANWTGVHLGYMCEWIEGATSSSYTVTDADQGCLVSRVDRIHLTFTEAGVSKTITALAYDATYATSTPILRTGDHAAALSAMPTSGNVSAAAGENVVVLDLPALLPGETRTLLHPSRGYDPYTGTAVALDINGDLLRGAGVLTAGNTVSFKIRQKRGIDVIDTSVSLTAVA
Physico‐chemical
properties
protein length:1205 AA
molecular weight: 128350,34010 Da
isoelectric point:6,08123
aromaticity:0,08133
hydropathy:-0,19419

Domains

Domains [InterPro]
DC_1007
ATT
111–250
DC_1007 G3DSA:2.60.40.2700 DC_2223 IPR011050 G3DSA:2.60.40.2700
G3DSA:2.60.40.2700
RBD
132–209
G3DSA:2.60.40.2700 DC_0400 DC_0572
QNH71623.1
1 1205
Architecture
ATT
STR
RBD
ATT 111-250 | STR 251-976 | RBD 977-1205
Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Tail Spike Domain Segmentation

Tail Spike Domain Segmentation

This protein has been segmented into three structural domains: N-terminal, central domain, and C-terminal.

Domain Layout
N-terminal
Central
C-terminal
QNH71623.1
1 1205
Domain Start End Length (AA) Confidence
N-terminal 1 235 235 0,8708
Central domain 236 464 230 0,8117
C-terminal 465 1205 740 0,1729
Legend: N-terminal Central domain C-terminal
3D Structure with Domain Coloring

The structure is colored according to the domain segmentation: N-terminal (blue), Central (green), C-terminal (pink).

Domain Coloring
N-terminal
1-235
Central
236-464
C-terminal
465-1205

Taxonomy

  Name Taxonomy ID Lineage
Phage Rhizobium phage V1VFA-S
[NCBI] 		2763532 Viruses > Duplodnaviria > Heunggongvirae > Uroviricota > Caudoviricetes
Host No host information

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
QNH71623.1 [NCBI]
Genbank nucleotide accession
MT778838 [NCBI]
CDS location
range 16213 -> 19830
strand +
CDS
ATGGCTGATCGCCGCTTTATCAACCAGTTCCCGAGCGCGTCACCCGAGGCGATCGCAACTGGCAATCTGATTATCGAAGCCAACGGGCAGGAATACCGTGCCACGACCGCAGTTCTCGGCGGTGTGCATCTGTTCTTCCTCGACGAAGATAACCGCACGCCGGTCGTGCAATTCCGTCTGACCAGCCCCGGCAGGACGGTCGAAAACGTCCCGGTAACGCTGACCGTGACCGCGCCGAACGGAACCGTCACCACGAAGAGCGCGACCACCGACGCCCTTGGCAACGGCCAGTATGACTTCACCGGCATCCTGGCACGCGGCCAGACCTACACGATCGAAGCCCGTGCGGCGATCTACCTGACTGCGACGACGCAGAAGACCATCAACGCCCTGTCCGCACCGATCGACCCTGTCACGGCCACGTCGACGGGCAAGGTTGGCGACACCATCACCCTCGGCGCGCTGAACTTCGACGGTAACCCGACCAGCTTCCGTTACCGCTGCCTTCGCGGCTCAAGCTACGTCATTCCCGGCGCCGAAGCTTCGACCTATACGTTGCAGCCCGACGATGACGGCGACCTTATCACGATACAGGTTCAGGCTACCAACGCAGGTGGCGACAGCCCCTGGTATTCCGCAAACGGCATTGGCCCGGTCTCCAACAAGACCTCTGTGCTGCTTGCGGCTCCCGTCATCAGCGGTTCCACCGCGCCTGGCGGCCGGCTGACTGTCAGCTCGCCCGGCTCCGCAAGCGAGAACGCCGTCGTCAAGTCCGACGAGTGGCAGATCAACCAGGCTAAGATCCCGGCGCTGAAGGCCCCGCTCACGCGCTATCTGGCCGCTACTACGGGTGTCTCTGCGCCGACGGGTTATCCTGACGGCAATAACCACCACGGCGTCGGCCTCTCTTCTGCGGCATATGCCGGCACCAACACGTTCAGCTTCTCGGTGGGCATCAGCGCCACGGAGAACGACTATATCGCCACTCAGATCGGCGCGTCCGGTGGCAACGAAGGCCCTCAGCCTTACACCCTCGCCATCCGGCACCTCAATACGAACAGCTTGATCCGCATCAAGATGTTCGCGGCGAAATATCGGGGCGGCGTGCTGGTCGAGGAAGTCCAGATGTCCAAGGTCGGCGCAACTGCCGGCCAGGAGCTGGCCGAACTGGCTGCGACCGCCAACAGCACCTCGCAGTGGACGCTGACGCATGATTTCGGCGAATGGCTCGAAGGCGATTGGCTTGTCTTCCGGCAGCAGGCCCGCAATACCTCAGCGTCCTCGACCAACAACTATCAGTGGGATTCGCGTGCAGGCGCGTCCTACGCCATCCTTCCCATCGGCAACGTCCAGGATCTCCAGAAGACGCTGAGCTCGTTCACGACCCGCGCCGACATGGCGGGCAAGAAGGTCCGGCTCGCTCGCACGTTCTCCAATCGCAACAACGACGTGGTCGCCTATTCCAACGAGATCACCTTGGCAGCGGCAGTCGCGCAGACCCAGGCTCCGGTGAATACGGCGCTGCCGACGATCTACGCGGTCTCCGATCGCTCCAATACCACCTGGCAGATCGACCTCGGTGCGTGGAGCAATCAGCCGACCGGCTACACCGTCCAGTGGCAGGCCAATGGGGTCGATATCCCCGGCGCCACGCTCATGAGCTACAAGCCGACGAGCGCTCAGGAAGGTCAGACGATCACCTGCGTCGTGACGGCGACGAACGGCGTCGGTGCGCCGACTTCGGTCGTCACTGCTGGCAAGATCGTTCAGACGGCCGCGGCCTTCTGGAATATCGCGACCGGCAACGACCTCAATGACGGCCTGACGGCTGAGTTTGCCAAGCAGAACCTGACGGGCACCGATACCATCCCGTCGGGCGCCACGGCCATTCTGAGCGGCGATTTCGGCACGCGGCTGAAGCTCGGCAGCTTCCGCACTTATGAGGGTCTCGGCGCTGCGCTGACCTCGATCGGCTCGACCAGCATCGCCTACGCCATCGACCACTACACTGACGACGGCTCGCTCGGTCGCAGCAACGTCATCATCCGCAAGATGCGCATCACCTCTGGTGACCGCGCCATCATGGCACGCCAGGGCAGCAACTGGGTGATCGAGGACGTTGTCATCGACAGCGCCGGCTACAATACGACCGGCCCGGCCGAGAACGCGTCTGGCATCTATTTCTATCGGAACAACGGTATCACGCTGCGCCGCGTTCAGCTGCTCCAGGTCATGTCCGACGGCCTCTATTCCGACACCAATGACAAGGTGCTGATCGAGGACTGCGTCTTCCTGCCGGTTAACACGGCCGAAGGCGACACCATTCAGACCCGTGCTGACCGCAACGACAGCAATGGCGCACCTGGTCCGCACCAGAAGGGCTTCCTCATGCGGGGAACCTTCCTGGACATGCATTCGCGGAAGACCTCGTCCGGCAAGGGCTGCCTGGTCACCAACATGCACGACTATATCCTGATCCACGATAATATCATGGACGGGAACAACTTCGTCCACGGCACGGACGAAGGCGACAACCAGGTCTTCTGCCGCAACACCAGCCGCTATGCCCGCAAGAACAGCTATTCGTTCGGCTATGGCATTGGTGGCTACGACAACCAGCCGGCGTCGCACAATCACCATATCTACGACAATTCCTGGTATGACTTTAACCGGGCGCTGTCGTTCACCGGTATTTCGGTCACCGGCTACACCGGCACCAAGTCCGGGCGCGTCGACATCGTTGCCCATGATGAGACGATCGTTAAGTGCGCCAACGGCGTTCGTATCGACCGGCCGACCTCGGGTCGCTTCCGTGGCTTTGTCTTCCACAATGTCAGCAAGTCGCTCGATCGGACGCTGACGACGCTGCCGGTTGGTGGTGATATCCAGGCGTTCCTTTGGAGCGACCACTACATCTATAACGGCAGCATCGCAGAGCCGCCCAAGGTCTTTGCACGCGCACAGATCACCGGCAACCGCGTCTCCGGTGCGGTTCTGTCGGGTCCGGATACCATCTTCGATACGGCAGCCGTGCTCGCGGCATTCCCGACCGCGCAGATCACCCGCTCCTACCAGTGGCGCCGGCACAAGCCTGCCGTCCAGTGGGCAAACTGGACCGGCGTTCACCTCGGCTACATGTGCGAATGGATCGAGGGCGCTACCTCGTCCAGCTACACGGTGACCGATGCAGATCAGGGCTGCCTGGTCAGCCGCGTCGATCGCATTCACCTGACCTTCACCGAGGCAGGTGTTTCGAAGACGATCACGGCGCTCGCCTACGATGCGACCTACGCCACCTCGACGCCTATCCTGCGCACCGGTGACCATGCTGCCGCCCTGTCGGCAATGCCGACCTCGGGTAACGTCTCTGCAGCCGCTGGAGAGAACGTGGTTGTTCTCGACCTGCCGGCACTGCTGCCTGGTGAGACGCGCACGCTGCTGCACCCCAGCCGCGGCTATGATCCCTACACCGGCACCGCGGTCGCACTCGACATCAACGGTGACCTGCTTCGCGGCGCAGGCGTCCTGACGGCCGGCAACACGGTCAGCTTCAAGATCAGGCAGAAGCGGGGCATCGACGTGATCGACACCTCGGTCTCTCTGACGGCCGTAGCTTAA

Genome Context

Genome Context

Tertiary structure

PDB ID
2c2acefe6c8e2c403fc055daac644a5ae4f2a32aa27c9f4316651f0a93bb5006
ColabFold
Source ColabFold
Method ColabFold
Resolution 0,2687
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50

Literature

Title Authors Date PMID Source
Complete genome sequence of Rhizobium leguminosarum bacteriophage vB_RlegS_V1VFA-S Gunathilake,D., Mackenzie,K.D., Yost,C.K. and Hynes,M.F. 2025-10-09 — GenBank