Protein

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Genbank accession
XOT39971.1 [GenBank]
Protein name
tail fiber protein
RBP type
TF
Evidence GenBank
Probability 1,00
TSP
Evidence DepoScope
Probability 0,97
Protein sequence
MANEIGTATNFEDFFSKIVAFLTTNAALVSAGQAWQALRVRRDNIDTYTTSLPDSFTGNGRKQIHTFRYDPRSLNINNPAQNGSESFWYTNSGFSAGSSYGQWKLRQAREVKTVRIKAPIGTSYASYAPKSFRLQYSDDGTAWTTALTVSNAPNWSAGERRDFAVPGTPGSHLYWKIIWDATQVVSYIGWQELLLLEADETVANHFGSEVILKALGNSGLDEIYTGIRAEYDSAAGWYNLFMNGYTGYDANEMSWFNQPGALPGYGAQYTRATPMVPLWNTTMPYWMVASGRSFRFCIKVGTNYEGGYLGFILPYATPNQYPYPLAVGGSLCPINDGSRSAEWRYSYVSFAHGVYPGPGTQSYPESENLWATLYLRSPEGAWNYHGNRSAYASSSSEGVGGPTVSSSPPYNVGINNAGLRNVWPHCMNGQWSSGLRPYRECLGGGYILQPCVLIQRSPAQVLGELEGTFAISGYQNSAENTTVFNGKTHVVFQNAYRNTIHEHWALSMD
Physico‐chemical
properties
protein length:509 AA
molecular weight: 56327,84500 Da
isoelectric point:6,32586
aromaticity:0,14145
hydropathy:-0,38114

Domains

Domains [InterPro]
DC_0072
STR
1–509
DC_0072
G3DSA:2.60.120.260
STR
75–188
G3DSA:2.60.120.260
IPR008979
STR
82–152
IPR008979
PF22633
RBD
84–163
PF22633
XOT39971.1
1 509
Architecture
STR
STR 1-509
Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Tail Spike Domain Segmentation

Tail Spike Domain Segmentation

This protein has been segmented into three structural domains: N-terminal, central domain, and C-terminal.

Domain Layout
N-terminal
Central
C-terminal
XOT39971.1
1 509
Domain Start End Length (AA) Confidence
N-terminal 1 51 51 0,1227
Central domain 52 250 200 0,6587
C-terminal 251 509 258 0,9665
Legend: N-terminal Central domain C-terminal
3D Structure with Domain Coloring

The structure is colored according to the domain segmentation: N-terminal (blue), Central (green), C-terminal (pink).

Domain Coloring
N-terminal
1-51
Central
52-250
C-terminal
251-509

Taxonomy

  Name Taxonomy ID Lineage
Phage Pseudomonas phage Lydia
[NCBI] 		3400811 Viruses > Duplodnaviria > Heunggongvirae > Uroviricota > Caudoviricetes
Host Pseudomonas aeruginosa PAO1
[NCBI] 		208964 Bacteria > Proteobacteria > Gammaproteobacteria > Pseudomonadales > Pseudomonadaceae > Pseudomonas

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
XOT39971.1 [NCBI]
Genbank nucleotide accession
PV031332.1 [NCBI]
CDS location
range 40390 -> 41919
strand +
CDS
ATGGCAAACGAAATCGGAACCGCGACGAACTTTGAGGACTTCTTCAGCAAGATCGTCGCCTTTCTTACCACGAACGCGGCACTGGTGTCGGCAGGTCAGGCTTGGCAGGCGCTGCGTGTCCGCCGGGACAACATCGACACGTACACCACCAGCCTCCCGGACTCCTTCACGGGTAACGGTCGGAAACAAATCCACACATTCCGCTATGATCCGCGGTCGCTTAACATAAACAACCCCGCCCAGAACGGTTCGGAGTCCTTCTGGTACACCAACTCGGGCTTCTCCGCCGGGAGCAGCTATGGTCAATGGAAACTGCGACAGGCGCGCGAAGTCAAGACCGTGCGCATCAAGGCCCCCATCGGGACCAGCTACGCGAGCTATGCCCCCAAGTCCTTCCGGCTCCAATACTCGGATGACGGAACCGCCTGGACCACGGCCCTGACCGTCTCGAACGCGCCGAACTGGTCCGCCGGGGAGCGCCGGGACTTCGCCGTGCCCGGCACCCCCGGTTCGCACCTGTATTGGAAGATCATCTGGGACGCGACCCAGGTGGTGAGCTACATAGGGTGGCAGGAACTCCTCCTGCTCGAAGCGGACGAGACGGTGGCCAACCACTTTGGGTCGGAGGTCATCCTAAAGGCCCTGGGCAACTCGGGTCTGGACGAAATCTACACCGGCATACGGGCGGAGTATGACAGCGCAGCGGGTTGGTACAACCTGTTCATGAACGGGTACACCGGCTATGACGCCAACGAAATGTCTTGGTTTAACCAACCGGGAGCCCTCCCGGGCTACGGGGCGCAATACACTCGGGCAACCCCGATGGTGCCGCTGTGGAACACCACCATGCCGTACTGGATGGTGGCTTCGGGCCGCTCCTTCCGGTTCTGTATCAAGGTCGGCACGAACTATGAGGGGGGCTATCTTGGTTTCATTCTCCCGTATGCTACGCCCAATCAATACCCGTACCCGCTCGCTGTCGGGGGTTCGCTCTGCCCCATCAACGACGGCTCCCGGTCCGCGGAGTGGCGTTATTCATACGTGAGCTTCGCCCACGGCGTGTATCCCGGGCCGGGCACTCAGAGCTACCCGGAAAGCGAGAACCTGTGGGCGACCCTTTACCTGCGCAGCCCGGAAGGAGCGTGGAACTACCATGGCAACCGTTCAGCCTATGCTTCGTCCAGCAGCGAGGGCGTAGGCGGTCCGACCGTTAGCAGCTCGCCTCCATACAACGTCGGCATCAACAACGCCGGTTTGCGCAACGTCTGGCCTCACTGCATGAACGGCCAGTGGTCCTCGGGCCTGCGCCCCTACCGCGAGTGCTTGGGCGGCGGGTATATTCTCCAGCCTTGCGTGCTGATTCAGCGGTCGCCTGCCCAAGTCCTCGGGGAGCTGGAGGGGACGTTTGCAATCAGTGGGTACCAAAACAGCGCGGAGAACACGACCGTGTTCAACGGCAAGACTCACGTGGTGTTCCAGAATGCTTACCGCAACACGATCCACGAGCACTGGGCGCTGTCGATGGATTGA

Genome Context

Genome Context

Tertiary structure

PDB ID
e00259313329ef44f36bcc5f589359d27469c662ac840af2b00626c09230612f
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,6357
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50