Protein

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Genbank accession
UZS00934.1 [GenBank]
Protein name
tail fiber protein
RBP type
TF
Evidence Phold
Probability 1,00
TF
Evidence RBPdetect
Probability 0,87
Protein sequence
MSLAIKWGDPTKTEEPSGFIYIDAVTAYSQDYRGQVTKHPVDSGASISDHFIKENPVYNISGIITGTDLSAIPWTITDQEGNKPINAQEQPISISLNSSASGLLQYLPDSIGQFLSVSLPTVESFGNTRTDLNYEILVKDLLKGILNGVRYDQKKDKVVSNIQTIDLYEFDGSNIRDIISDLVITNFRIREDQDTGDALFLDLTLEQVTFASLEKVELPQDVQQSLKKKAAPKKPKTNAPSTPKDCEAAQASGDPTAPSTESSALKQFGIGGVLVPTGGTL
Physico‐chemical
properties
protein length:281 AA
molecular weight: 30481,79490 Da
isoelectric point:4,65082
aromaticity:0,06762
hydropathy:-0,31673

Domains

Domains [InterPro]
IPR048494
ATT
23–219
IPR048494
DC_1100
STR
33–273
DC_1100
UZS00934.1
1 281
Architecture
ATT
STR
ATT 23-219 | STR 220-273 |
Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Taxonomy

  Name Taxonomy ID Lineage
Phage Pseudomonas phage vB_PaeM_M1
[NCBI] 		2995601 Viruses > Duplodnaviria > Heunggongvirae > Uroviricota > Caudoviricetes
Host Pseudomonas sp.
[NCBI] 		306 cellular organisms > Bacteria > Pseudomonadati > Pseudomonadota > Gammaproteobacteria > Pseudomonadales

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
UZS00934.1 [NCBI]
Genbank nucleotide accession
OP714164.2 [NCBI]
CDS location
range 57978 -> 58823
strand +
CDS
ATGTCATTAGCGATAAAATGGGGCGACCCAACTAAGACAGAAGAGCCTTCTGGCTTTATTTACATAGATGCAGTTACAGCCTATTCCCAAGACTACCGTGGTCAGGTGACTAAACATCCGGTGGATTCCGGGGCTTCCATCTCTGACCATTTTATTAAAGAAAACCCAGTTTACAACATCTCTGGTATTATAACTGGCACAGACTTATCTGCTATCCCTTGGACTATCACAGATCAGGAAGGAAATAAACCAATAAACGCCCAAGAGCAACCTATTTCAATTTCATTGAATAGTAGTGCATCGGGTTTGCTTCAGTATCTTCCTGATAGTATTGGTCAATTCCTTTCTGTCTCACTTCCAACTGTAGAAAGTTTTGGTAATACCCGTACAGATTTAAACTATGAGATATTAGTTAAAGACCTTCTTAAAGGGATTTTGAATGGTGTACGCTATGACCAGAAAAAGGATAAAGTAGTAAGCAATATCCAGACCATTGACCTTTATGAGTTTGATGGTTCAAATATCAGGGATATTATTTCTGATCTTGTCATTACAAATTTTAGAATCAGGGAAGACCAAGACACTGGTGACGCCCTTTTCTTAGACCTTACACTTGAGCAAGTGACTTTTGCCTCTTTGGAGAAAGTTGAACTGCCACAAGATGTACAGCAGTCACTTAAAAAGAAAGCTGCACCAAAGAAACCTAAGACAAATGCACCTTCCACACCAAAAGATTGTGAAGCTGCACAAGCGTCTGGTGATCCAACCGCACCTTCAACTGAATCATCAGCACTAAAACAATTTGGTATTGGTGGTGTACTTGTGCCAACAGGGGGAACACTATGA

Genome Context

Genome Context

Tertiary structure

PDB ID
7377dfc4677314ac43b26af0bf7c1e9be998f1b8f92f05558e10bbec60328e26
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,6447
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50

Literature

Title Authors Date PMID Source
Characterization and genomic Analysis of a novel Pseudomonas phage vB_PsaP_M1, representing a new viral family, Psaeviridae Ren,L., Liu,Y., Liang,Y., Liu,B., McMinn,A., Zheng,K., Wang,Z., Wang,H., Shao,H., Sung,Y.Y., Mok,W.J., Wong,L.L. and Wang,M. 2022 — GenBank