Protein

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Genbank accession

XSB41878.1 [GenBank]

Protein name

tail fiber protein

RBP type

Evidence GenBank

Probability 1,00

Evidence RBPdetect

Probability 0,89

Evidence RBPdetect2

Probability 0,93

Protein sequence

MSVVVSGTLKSPDGEAISGANITLTALTVSPDALSGTSASAVTRDGGYYGMTLEPGEYAVSVTVKGKTAVYGRVRIEGTESTVTLNMLLRRSLVEVSIPGELLTDFRQIQNNVADDLATIRRLNEDTAVKNNQASQSKESAAASAKTASESAKAATSKATESAQKASEAAEAATRAGESEKAAAADAKEARRHAETARVAQEAAGDVLKRAEAATVSAEEARRMAENARGPKGDTGPKGDAGPRGETGPAGPRGEKGEQGERGPQGIPGQKGDTGERGPQGVQGPAGATGPSGPRGATGPQGAMGPRGETGARGEKGDPGGPQGPKGDAGPRGEPGPKGDTGPRGEAGPPGPQGPAGQTGPKGDKGEPGATGPAGPAGPRGETGPAGPAGPAGSVASVPDASTSQKGVVQLSSDTNSDDETKAATPKAVKAVMAEVQAAKTKAEEAATRAAVPGPKGDKGEPGATGPAGPAGPRGPAGAAGPKGDAGPAGPAGKDGTAGAEGKAGPAGPRGERGPAGAQGVPGPVGPAGPAGKTGPQGPAGGRGPMGLPGLDGKTGPQGPQGPQGPTGRLVPGEIYSIGTYIIAALAPYTTDIGRTYQPGETVQGSRLKRCAIIKDASGNYMKANTDGIDGNLSSVPGSWMVCNEITSTNDNEGIGLFQRAY

Physico‐chemical properties

protein length:	662 AA
molecular weight:	64775,44970 Da
isoelectric point:	6,76653
aromaticity:	0,01964
hydropathy:	-0,65801

Domains

Domains [InterPro]

DC_1608
STR
3–430

DC_1608 DC_1479

PF13620
ENZ
5–86

PF13620 PTHR24637 IPR008160 DC_1453

IPR008969
ATT
5–93

IPR008969 Coil IPR008160 G3DSA:1.20.5.320 Coil

G3DSA:2.60.40.1120
STR
5–97

G3DSA:2.60.40.1120 IPR005068

XSB41878.1

1 662

Architecture

ATT

STR

ATT 3-93 | STR 94-659 |

Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Domains [InterPro]

Domain ID	Category	Cluster	Start	End	Layer	Name	Pref Zone	Confidence	Evidence	Support
DC_1608	STR	DC_1608	3	430	Novel HMM	DC_1608	Central	Low	Positional only	26 proteins / 26 hits
PF13620	ENZ	DC_0734	5	86	InterPro cluster	Carboxypeptidase regulatory-like domain	C-terminal	High	Text match	4 proteins / 4 hits
IPR008969	ATT	IPR008969	5	93	Merged direct domain	Carboxypeptidase-like, regulatory domain superfamily	N-terminal	Low	Positional only	16 proteins / 16 hits
G3DSA:2.60.40.1120	STR	G3DSA:2.60.40.1120	5	97	Merged direct domain	G3DSA:2.60.40.1120	Central	Low	Positional only	6 proteins / 6 hits
PTHR24637	Unmapped	-	102	320	PANTHER	COLLAGEN	-	-	-	-
Coil	Unmapped	-	208	228	Coils	Coil	-	-	-	-
IPR008160	STR	DC_0536	229	285	InterPro cluster	Collagen triple helix repeat	C-terminal	High	Text match	355 proteins / 386 hits
IPR008160	STR	DC_0536	336	394	InterPro cluster	Collagen triple helix repeat	C-terminal	High	Text match	355 proteins / 386 hits
G3DSA:1.20.5.320	STR	G3DSA:1.20.5.320	366	419	Merged direct domain	G3DSA:1.20.5.320	Central	Low	Positional only	67 proteins / 67 hits
DC_1453	STR	DC_1453	400	517	Novel HMM	DC_1453	Central	Low	Positional only	102 proteins / 102 hits
IPR005068	STR	DC_0738	402	443	InterPro cluster	Bacteriophage lambda, Tail fiber protein, repeat-2	Central	High	Text match	217 proteins / 347 hits
Coil	Unmapped	-	429	449	Coils	Coil	-	-	-	-
DC_1479	STR	DC_1479	499	659	Novel HMM	DC_1479	Central	Low	Positional only	21 proteins / 21 hits

Taxonomy

	Name	Taxonomy ID	Lineage
Phage	Escherichia phage PhiR12_3 [NCBI]	3416474	Viruses >
Host	Escherichia coli [NCBI]	562	cellular organisms > Bacteria > Pseudomonadati > Pseudomonadota > Gammaproteobacteria > Enterobacterales

Coding sequence (CDS)

Genbank protein accession

XSB41878.1 [NCBI]

Genbank nucleotide accession

PV340552.1 [NCBI]

CDS location

range 39851 -> 41839
strand +

CDS

GTGAGTGTTGTTGTTTCGGGGACGCTGAAATCTCCTGATGGTGAGGCAATATCAGGCGCAAATATTACCCTGACGGCGCTGACAGTTTCACCGGATGCGCTCAGCGGCACCAGTGCGTCAGCAGTGACTCGTGACGGCGGGTATTACGGAATGACGCTGGAGCCGGGGGAGTATGCGGTTTCTGTGACGGTGAAAGGGAAGACTGCTGTCTACGGACGTGTGCGTATTGAGGGGACTGAAAGTACGGTGACGCTCAATATGCTGTTACGCCGCAGTCTTGTTGAGGTGAGCATACCCGGAGAACTGCTGACAGATTTCCGGCAGATACAGAACAATGTGGCGGATGACCTTGCCACGATTCGTCGTCTGAACGAAGACACGGCGGTGAAAAATAATCAGGCTTCACAGTCGAAGGAAAGCGCTGCTGCCAGTGCGAAGACTGCATCAGAAAGCGCGAAGGCTGCGACCAGCAAAGCGACGGAGTCTGCACAAAAAGCCAGTGAGGCTGCAGAGGCGGCGACCCGGGCAGGTGAGTCTGAAAAGGCAGCGGCAGCTGACGCTAAAGAGGCCAGACGACATGCTGAAACCGCCAGAGTGGCTCAGGAGGCCGCCGGAGACGTTCTTAAACGTGCTGAGGCTGCTACAGTTAGTGCTGAAGAAGCCAGACGTATGGCTGAGAATGCACGAGGACCTAAAGGCGATACAGGACCGAAAGGTGATGCTGGTCCTCGTGGTGAAACAGGTCCGGCGGGTCCGCGTGGGGAGAAAGGTGAGCAGGGAGAGCGCGGACCTCAGGGCATACCGGGCCAGAAAGGTGATACAGGAGAACGGGGACCTCAGGGAGTGCAGGGGCCAGCTGGCGCAACAGGGCCATCTGGCCCACGTGGTGCGACCGGGCCACAGGGAGCAATGGGGCCGCGTGGTGAAACCGGGGCCAGAGGCGAAAAAGGAGACCCGGGGGGGCCTCAGGGACCAAAGGGGGATGCTGGTCCGAGAGGTGAGCCGGGGCCGAAAGGTGACACCGGCCCACGTGGAGAGGCCGGACCACCCGGACCACAGGGTCCGGCAGGGCAAACCGGCCCGAAAGGGGATAAAGGTGAACCCGGCGCAACAGGTCCGGCAGGTCCCGCAGGCCCTCGGGGAGAAACCGGCCCCGCAGGTCCTGCGGGTCCCGCAGGCAGTGTCGCCAGTGTTCCGGATGCCAGCACATCACAGAAAGGTGTTGTACAGCTGAGCAGCGATACCAACAGCGATGATGAAACAAAAGCGGCAACCCCAAAGGCTGTGAAAGCGGTAATGGCAGAAGTGCAGGCAGCAAAAACGAAGGCAGAAGAGGCAGCAACCCGGGCAGCAGTCCCCGGACCGAAAGGGGATAAAGGTGAACCCGGCGCAACAGGTCCGGCAGGTCCCGCAGGCCCTCGGGGACCGGCTGGTGCAGCTGGTCCCAAAGGTGATGCAGGCCCGGCAGGCCCCGCAGGAAAGGATGGTACCGCCGGAGCGGAAGGTAAGGCAGGTCCGGCAGGGCCACGAGGTGAAAGGGGACCAGCGGGGGCACAGGGTGTTCCGGGGCCGGTTGGTCCGGCAGGTCCTGCGGGTAAAACGGGGCCACAGGGCCCTGCCGGAGGGCGAGGGCCGATGGGACTGCCCGGGTTGGATGGTAAAACCGGACCACAGGGACCACAGGGACCACAAGGGCCAACCGGAAGGCTGGTACCCGGGGAAATTTACAGCATCGGAACATACATTATTGCCGCACTAGCCCCGTATACAACCGACATCGGCAGAACCTATCAGCCAGGAGAAACTGTACAGGGTTCACGCCTTAAGCGATGCGCCATAATCAAAGATGCAAGCGGGAACTATATGAAAGCTAACACCGATGGCATTGACGGCAACCTATCCTCAGTTCCGGGCTCATGGATGGTGTGTAATGAAATTACGTCGACAAATGACAATGAAGGCATCGGGCTGTTCCAGCGCGCATACTGA

Genome Context

Tertiary structure

PDB ID

66aed06e6ca008346b1208665c193bfd3eef9f3b89593b817e0c47b1b94c425d

ESMFold

Source ESMFold

Method ESMFold

Resolution 0,6320

Oligomeric State monomer

Download PDB

Model Confidence

Very high
pLDDT > 90

High
90 > pLDDT > 70

Low
70 > pLDDT > 50

Very low
pLDDT < 50

Literature

Title	Authors	Date	PMID	Source
E. coli prophages encode an arsenal of defense systems to protect against temperate phages	Brenes,L.R. and Laub,M.T.	2025	—	GenBank

Protein

Domains

Domains [InterPro]

Domains [InterPro]

Taxonomy

Coding sequence (CDS)

Coding sequence (CDS)

Genome Context

Genome Context

Tertiary structure

Predicted Aligned Error (PAE)

Model Confidence

Literature