Protein

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Genbank accession
XYR92669.1 [GenBank]
Protein name
hypothetical protein
RBP type
TSP
Evidence RBPdetect
Probability 0,51
TF
Evidence RBPdetect2
Probability 0,90
Protein sequence
MDYPMTILQTLYPIPDTLVQKAADNVFTGYNNFRGGVLGIQQVDTLPDNNTVIQWIRIGQMDFSSTANRIFMFNMVSGGIGGRRYARDYVTVSPRGYTSDVVFTQQVVNNMVEHVQQGMVDSISNWAQVGITPFLNADGTQRGINIWIRRGTYNHGMSFYPLNVSGGSYAGRSLSEASGTIVTVEPEGIIYATAQSVYTSGMSQFTARSLPNSNVVFWLQNETSANVAALYWDRTLMSTVLRSYATAGGSYTNFSLNSTAGTITWGSNTVYHSGIFDYTTFVVKGTEAQLSRLHLASNNAGGVITFRDPADVTSTGMRYFFTMNSTSFSINTATDEGAFRKNRFSIPRDNASPVLIDGGAAWFAGNLPSPADTTKAAIIESSSFTWEFRAASVPQEVNSWRWGPFVLRGYDSAGNNVRSFARRAEAGTDASSIATGLRSQLGDVNRAWIEWYLNSFRICGADGTISASFSDSAIWLQKPLTFSSTALFNGVATFSSVISSRTGTPNTQMIFHSIGWNNGVQRWAQVMEATGAYVWYCYNATGGNPTSVLSMTNPANGLGGNNPGIGVAGSIYVTQGIIAPNWGFTTNDANKASFIATGSYGGGFMCQDNAGAGIYYGGMYAASGWVGIGLTAANSVGLNKILRLTQEQYMTVQTEGGFAARGGSAVMVVEERSSTNVQFHMYATGGAWRVWDNVTGADNLTCYRTTGDLYIRSWGYAANFAINSDRRIKTWISDLDPEEELDKVVTLVPRLYLKDNKLESGVYAQDVQERWAHMVTVSESNPYGIDGLLTVAHTMLHAPLVASIQALHARIEKLQARLQELEPR
Physico‐chemical
properties
protein length:824 AA
molecular weight: 89687,18830 Da
isoelectric point:6,10913
aromaticity:0,11408
hydropathy:-0,13629

Domains

Domains [InterPro]
DC_1671
RBD
17–824
DC_1671
IPR030392
CHP
724–818
IPR030392
IPR030392
CHP
724–769
IPR030392 Coil
XYR92669.1
1 824
Architecture
RBD
RBD 17-824
Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Tail Spike Domain Segmentation

Tail Spike Domain Segmentation

This protein has been segmented into three structural domains: N-terminal, central domain, and C-terminal.

Domain Layout
N-terminal
Central
C-terminal
XYR92669.1
1 824
Domain Start End Length (AA) Confidence
N-terminal 1 594 594 0,0375
Central domain 595 793 200 0,2006
C-terminal 794 824 30 0,9977
Legend: N-terminal Central domain C-terminal
3D Structure with Domain Coloring

The structure is colored according to the domain segmentation: N-terminal (blue), Central (green), C-terminal (pink).

Domain Coloring
N-terminal
1-594
Central
595-793
C-terminal
794-824

Taxonomy

  Name Taxonomy ID Lineage
Phage Xanthomonas phage PhiXhv-12
[NCBI] 		3447916 Viruses > unclassified bacterial viruses >
Host Xanthomonas hortorum pv. vitians
[NCBI] 		83224 Pseudomonadota > Gammaproteobacteria > Lysobacterales > Lysobacteraceae > Xanthomonas > Xanthomonas hortorum

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
XYR92669.1 [NCBI]
Genbank nucleotide accession
PV764601 [NCBI]
CDS location
range 25668 -> 28142
strand -
CDS
GTGGACTATCCAATGACGATTCTTCAAACGCTGTACCCAATCCCGGATACCCTTGTCCAAAAGGCAGCGGACAACGTATTCACGGGCTACAACAATTTTCGAGGTGGCGTGCTTGGTATCCAGCAGGTAGACACCTTGCCGGACAACAACACTGTGATTCAGTGGATCCGAATTGGCCAGATGGACTTCAGTAGCACTGCCAATCGAATCTTCATGTTCAACATGGTTTCGGGTGGCATCGGCGGCCGCCGCTACGCGCGAGACTACGTGACCGTTTCTCCCCGAGGTTACACCAGTGACGTGGTGTTTACCCAGCAAGTAGTTAACAACATGGTTGAACATGTGCAGCAGGGCATGGTTGACAGCATAAGTAACTGGGCCCAAGTTGGTATCACTCCTTTCCTGAACGCTGATGGCACTCAACGTGGCATCAATATTTGGATTCGACGGGGTACTTACAACCATGGCATGTCGTTCTACCCACTAAATGTTTCGGGAGGGTCCTACGCAGGTCGCTCGCTGTCCGAAGCCAGTGGTACGATTGTTACCGTGGAGCCAGAAGGCATCATCTACGCCACCGCGCAATCGGTATACACGTCAGGCATGAGTCAGTTCACCGCCCGCTCACTACCTAACTCCAACGTGGTCTTTTGGCTCCAGAATGAAACCAGCGCCAACGTTGCTGCACTGTATTGGGACCGCACGCTTATGTCTACGGTCCTTCGTAGCTATGCAACTGCGGGTGGTAGCTACACAAACTTCTCCCTGAACTCAACGGCAGGCACTATTACGTGGGGAAGTAACACTGTTTACCATTCGGGAATCTTTGATTACACCACGTTTGTGGTCAAGGGAACCGAAGCACAGCTATCCCGACTGCACTTAGCATCGAATAATGCTGGCGGTGTTATTACGTTCCGCGACCCAGCTGACGTTACTTCGACCGGCATGCGGTACTTCTTCACCATGAATAGTACGTCGTTTAGTATCAATACGGCTACTGACGAGGGTGCTTTCCGTAAGAACAGGTTCAGTATTCCCCGAGACAATGCCTCTCCTGTGTTGATTGATGGTGGGGCTGCTTGGTTCGCTGGGAATCTTCCGTCCCCTGCTGATACAACCAAGGCTGCCATCATTGAAAGCAGTAGCTTCACTTGGGAGTTCCGGGCTGCTTCAGTACCCCAAGAAGTTAACAGCTGGCGGTGGGGCCCCTTCGTACTGCGAGGTTATGACTCCGCGGGCAATAACGTGCGTTCGTTTGCACGACGGGCGGAGGCGGGTACGGATGCGTCTTCCATCGCTACGGGTCTTCGGAGTCAGCTAGGTGATGTCAATCGTGCATGGATTGAGTGGTATCTCAATTCCTTCCGTATCTGTGGTGCTGATGGTACGATTTCGGCTTCTTTTAGCGACTCTGCCATCTGGCTACAGAAGCCGCTTACTTTCAGTTCTACTGCGCTGTTCAACGGCGTGGCCACCTTCTCCTCCGTCATAAGTTCACGCACCGGCACTCCTAATACTCAAATGATTTTCCACTCGATCGGGTGGAATAATGGTGTGCAGCGTTGGGCGCAGGTGATGGAAGCGACGGGTGCTTATGTGTGGTACTGCTACAATGCCACTGGCGGTAATCCTACTTCTGTGTTGTCGATGACTAACCCCGCCAACGGGCTCGGGGGCAATAACCCCGGCATCGGCGTGGCAGGTTCGATCTATGTAACCCAAGGCATCATTGCGCCTAACTGGGGCTTCACTACCAACGATGCCAACAAGGCGTCGTTCATCGCTACCGGTAGTTACGGTGGTGGTTTCATGTGTCAAGATAACGCAGGTGCTGGTATCTACTACGGAGGTATGTATGCTGCAAGCGGCTGGGTCGGTATTGGCCTAACCGCTGCCAACTCGGTTGGCCTTAACAAGATTCTACGACTTACGCAAGAACAGTACATGACGGTACAGACTGAAGGTGGCTTCGCCGCCCGAGGTGGCTCCGCTGTCATGGTTGTAGAGGAGCGCAGTAGCACCAACGTGCAGTTCCATATGTACGCTACAGGTGGTGCGTGGCGTGTTTGGGATAACGTTACCGGTGCCGACAACCTCACTTGTTATCGGACTACCGGTGACTTGTATATTCGTAGTTGGGGTTACGCGGCCAACTTTGCTATCAACTCGGATCGTCGAATCAAGACGTGGATTTCTGATTTGGACCCCGAGGAAGAACTGGACAAGGTGGTGACGCTGGTTCCACGCCTGTACCTCAAGGACAACAAGCTGGAATCTGGTGTGTACGCGCAGGACGTGCAGGAACGGTGGGCCCACATGGTTACCGTGAGCGAGTCAAATCCCTATGGCATTGACGGACTCCTGACTGTGGCCCACACCATGCTACACGCTCCACTGGTTGCGTCCATCCAAGCCTTGCACGCTCGCATCGAAAAGCTGCAAGCCCGACTGCAAGAGCTTGAACCCCGATAA

Genome Context

Genome Context

Tertiary structure

PDB ID
59425825be9dc06e4097e7421312aa65dd3cfbee6fb2a2107ce014bab2403db0
ColabFold
Source ColabFold
Method ColabFold
Resolution 0,4356
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50