Protein

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Genbank accession
YAS76313.1 [GenBank]
Protein name
tail fiber protein
RBP type
TF
Evidence GenBank
Probability 1,00
TF
Evidence RBPdetect
Probability 0,88
Protein sequence
MPRIREVYILPAGSQAYPNSNISSSAYNNLLKDLALDNNSPRPISAGGTAADNAVQARVNLGTDDASNLTKGKIIANLLPFYPIQQGGGIGQLDNKIYLGWNGTQLLLQVDLSSMREVWTSQLAPRALQNLVDHAHKPNHIVYTTDSNQYAATPLSSFMRKLFSCHNGETLHQAIFQNGAQFYNNSQRIAAFLDDGDIMCYKRQKTVWQGIEIAQHTANIALESTKNCLYKTTVLNMGRGPGYIHFDTDKGAVGCSYFLSDERLKKVHGESSASAREIIEQLKFIDFNYLPESGMDSELRYLIGFSENNLKEINEVFVDTIGGYLAPNPSVIIPHLAKAIQELLQEVKELRDMIDKQNEEHQDVQDMSNTPLNSQKFD
Physico‐chemical
properties
protein length:378 AA
molecular weight: 42130,91900 Da
isoelectric point:5,59838
aromaticity:0,08201
hydropathy:-0,39762

Domains

Domains [InterPro]
DC_1093
STR
6–110
DC_1093 DC_1985
IPR030392
CHP
260–354
IPR030392
Coil
Unmapped
333–367
Coil
YAS76313.1
1 378
Architecture
STR
RBD
STR 6-110 | RBD 111-377 |
Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Taxonomy

  Name Taxonomy ID Lineage
Phage Liberibacter phage P-V1R1-4
[NCBI] 		3464942 Viruses >
Host Candidatus Liberibacter asiaticus
[NCBI] 		34021 Bacteria > Proteobacteria > Alphaproteobacteria > Rhizobiales > Rhizobiaceae > Candidatus Liberibacter

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
YAS76313.1 [NCBI]
Genbank nucleotide accession
PX222958.1 [NCBI]
CDS location
range 602 -> 1738
strand -
CDS
ATGCCTCGTATTAGAGAAGTATACATCCTTCCGGCCGGATCTCAAGCTTATCCTAATAGTAATATTAGTAGTAGCGCTTATAATAATCTATTAAAAGATTTGGCATTGGATAATAATAGTCCGCGTCCTATTTCTGCGGGAGGAACAGCAGCAGATAATGCTGTCCAAGCGCGTGTCAATTTGGGAACAGACGATGCGAGTAATCTTACCAAAGGAAAAATTATTGCAAATTTATTACCCTTTTATCCTATTCAGCAAGGAGGTGGAATAGGACAACTAGATAATAAAATATATTTGGGATGGAACGGAACACAACTTCTATTGCAAGTTGATTTATCTTCCATGAGAGAAGTGTGGACATCGCAATTAGCACCTCGTGCTTTGCAAAATTTAGTTGATCATGCTCACAAACCAAATCATATTGTATATACTACCGATTCTAATCAATATGCTGCAACGCCTCTTTCTTCTTTTATGCGAAAATTATTCTCTTGTCACAATGGTGAAACATTGCATCAAGCTATTTTCCAAAATGGCGCGCAATTTTACAATAATTCGCAGAGAATTGCTGCATTTCTGGATGATGGTGATATAATGTGCTATAAGCGCCAAAAAACGGTGTGGCAAGGAATCGAGATAGCGCAACATACAGCTAATATTGCTCTAGAATCAACAAAAAATTGTCTTTACAAGACGACGGTCTTAAATATGGGACGAGGTCCGGGATACATTCACTTTGATACCGACAAAGGTGCTGTAGGATGTAGCTATTTTCTATCCGATGAACGATTAAAAAAAGTACATGGGGAATCGTCTGCTTCTGCACGAGAGATCATTGAACAATTGAAATTTATTGATTTCAATTATCTTCCCGAAAGTGGAATGGATTCTGAATTGCGATATTTGATTGGTTTTTCAGAAAATAACTTAAAAGAAATCAATGAGGTATTTGTTGATACGATTGGCGGTTATTTGGCTCCTAATCCTTCTGTTATTATCCCGCATCTTGCAAAAGCAATACAAGAACTTTTACAGGAGGTAAAGGAATTACGTGATATGATCGATAAACAAAATGAAGAACATCAAGATGTACAAGATATGTCCAATACGCCTCTAAATTCCCAAAAATTTGATTAG

Genome Context

Genome Context

Tertiary structure

PDB ID
5a089151cd4f40dc5a62aaa7a0a9486f8fef731e5728dd47392e08f2abd47dbd
ColabFold
Source ColabFold
Method ColabFold
Resolution 0,7997
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50