Protein

View in Explore
Genbank accession
QIQ67008.1 [GenBank]
Protein name
putative tail fiber protein
RBP type
TF
Evidence RBPdetect
Probability 0,87
Protein sequence
MITPELIPSPFAAQGDKDPIPQTSSTGFANLRDGYTPDYEISLASNNPQAKAVERKIQNQLFFIATQNAQAWQRQMAPPWFQGMPGGYEQNAEVVRVGNDGIMRRYRSMVNANASDPLSSTTWEEQPAWSAMRSNIPMPAGGPGLSSGGEVITTGRNFNDLLNGTWEFFSDSVVIASQNAPVYPASAGAAAGMLEAKSWVSGANTFCVQRYTDRVGNVAVRGLNAGAWTNWMYAVNVMALQQGRVTYGVAAGSANAYTLTLVPQLQGGLVDGMILRVKFNTMNTGATTINVSGLGAKAIVGAANFPLTGGELGQGLIAELVFDAAGDRWRILAGAPRIQVGNADQDYQAPSWKQVKDYVASQKLTEVDWADVVNKPNVAIQDTTPWFANLELSDARPFIDFHFNSNRAKDFDYRLISEADGSLAFYSRQGSAGPTQDILFNRNSVTFFQPRLDVAKNLAYIANSGPLWQNTTADQPGWKFTFAQGVDANNNAVIAVNTTNPDGSYRSQVMRWDWASTNVIFNNRPLFAGQYTPWDSGNFDPSTKLTVNATNQIAGPTGIRNTNGNTGNMNTWGSGSTTASYGNAAIQIFGKGGGEPAAIYFDNSQTGWYLGMDKDGQLKRAGWSLGNNSYVITDELNIRNHINGMAARPVWGGNEFWGPWNFNPNTKLTIKAGTQETSSTAIYSGTMPFAPIASLSDYSQAPLTIYNAPTGPSAKPAVIAFIRPGNWGAFFGLDTDNKLKWGGGSLGNSSREIADSSNIMNLWAANPTAPTWNGQTVWRSGNFDPATKVDLNAPNATNGNMIFNRIAGTGSGIASSGRVGAISLQNGATAGAAAAVTFERGGGFFVNFGLDTDNVLKVGGGNLGANAYPVIHAGNYNNYINQALVQVGLGGVGSYGIFAVLDNAAPTATVQPGVVVDGSILIYSSCAANYNSGQRPAGTWRCMGYVVNRDANTPDSATLFQRVT
Physico‐chemical
properties
protein length:964 AA
molecular weight: 102868,18670 Da
isoelectric point:5,71092
aromaticity:0,10477
hydropathy:-0,25249

Domains

Domains [InterPro]
DC_0009
ATT
1–209
DC_0009 DC_1788
cd19958
STR
152–231
cd19958 DC_1924
DC_1788
STR
167–697
DC_1788
QIQ67008.1
1 964
Architecture
ATT
STR
RBD
ATT 1-209 | STR 210-810 | RBD 811-964
Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Taxonomy

  Name Taxonomy ID Lineage
Phage Pseudomonas phage shane
[NCBI] 		2719609 Uroviricota > Caudoviricetes > Lindbergviridae > Pbunavirus DP1 >
Host Pseudomonas aeruginosa PAO1
[NCBI] 		208964 Bacteria > Proteobacteria > Gammaproteobacteria > Pseudomonadales > Pseudomonadaceae > Pseudomonas

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
QIQ67008.1 [NCBI]
Genbank nucleotide accession
MT119368 [NCBI]
CDS location
range 31010 -> 33904
strand +
CDS
GTGATCACACCCGAACTGATCCCCAGTCCGTTTGCCGCTCAGGGCGATAAAGACCCGATTCCACAAACCTCCTCCACTGGCTTCGCAAACCTTCGCGACGGCTATACGCCGGACTACGAAATCAGCCTGGCGTCGAACAACCCGCAGGCCAAAGCGGTCGAGCGGAAAATTCAAAACCAACTCTTCTTCATCGCGACCCAGAACGCACAGGCGTGGCAGCGACAAATGGCGCCGCCGTGGTTTCAGGGCATGCCTGGCGGCTACGAACAGAATGCAGAAGTCGTGCGCGTCGGAAATGACGGCATAATGCGGCGTTATCGTTCCATGGTGAATGCCAATGCGAGCGACCCTCTCAGCAGCACGACTTGGGAAGAACAACCCGCATGGTCGGCGATGCGCTCCAACATCCCGATGCCGGCCGGAGGCCCAGGCCTATCTTCTGGCGGAGAAGTCATCACGACCGGCCGCAACTTCAACGACCTGTTAAATGGGACGTGGGAGTTCTTCTCTGATTCAGTGGTTATCGCTTCTCAGAATGCCCCCGTATATCCGGCTTCCGCTGGTGCCGCTGCTGGCATGTTGGAGGCGAAATCTTGGGTGTCCGGAGCCAATACGTTCTGCGTCCAACGCTACACTGATCGCGTCGGGAACGTCGCTGTGCGCGGGCTTAATGCCGGAGCGTGGACCAACTGGATGTATGCGGTAAACGTCATGGCCCTTCAACAAGGTCGGGTCACCTATGGAGTCGCGGCCGGATCGGCGAACGCTTACACGTTGACGCTAGTTCCGCAGCTCCAAGGTGGTTTGGTAGATGGCATGATCCTTCGGGTCAAGTTCAACACCATGAACACCGGCGCTACTACCATCAACGTCTCCGGACTCGGCGCCAAAGCCATCGTCGGCGCGGCCAACTTCCCTCTCACCGGCGGCGAACTTGGCCAAGGACTCATCGCTGAGCTTGTATTCGACGCAGCAGGCGACCGCTGGAGAATCCTCGCAGGCGCGCCACGCATCCAAGTTGGCAACGCCGATCAAGATTACCAGGCCCCCAGCTGGAAACAGGTGAAGGATTACGTCGCGTCCCAAAAGCTGACTGAAGTGGACTGGGCTGACGTCGTCAACAAGCCGAACGTCGCTATCCAAGACACCACGCCGTGGTTCGCCAATCTGGAGCTGTCCGATGCTCGGCCTTTCATCGATTTCCACTTCAACAGCAATCGCGCCAAAGATTTTGACTATCGGCTGATATCTGAAGCAGACGGATCGCTGGCTTTCTATTCGCGGCAGGGGTCTGCTGGGCCTACCCAGGACATCCTGTTCAACCGAAATTCCGTGACTTTCTTCCAGCCGCGACTCGATGTGGCGAAAAACCTCGCGTACATCGCGAACTCTGGCCCCCTTTGGCAGAACACCACCGCCGATCAGCCCGGTTGGAAATTCACCTTTGCACAAGGCGTGGACGCGAACAACAACGCGGTGATCGCAGTCAATACCACCAATCCGGACGGTTCCTATCGTTCACAGGTCATGCGATGGGACTGGGCGTCCACGAACGTCATATTCAACAACCGTCCGCTCTTCGCCGGTCAATACACCCCTTGGGATTCTGGGAACTTCGATCCTTCCACCAAGTTGACGGTGAATGCCACGAACCAAATCGCCGGCCCAACCGGGATTCGGAATACCAACGGCAACACCGGCAACATGAACACCTGGGGTTCCGGCTCCACGACGGCATCCTATGGCAATGCTGCCATTCAAATCTTCGGAAAAGGGGGCGGTGAGCCTGCCGCGATCTATTTCGACAACTCCCAGACCGGATGGTATCTGGGTATGGACAAGGATGGACAGCTCAAGCGGGCCGGCTGGTCACTCGGCAACAACTCTTATGTCATCACCGATGAATTGAACATCAGAAACCACATCAACGGTATGGCAGCAAGGCCGGTTTGGGGCGGAAATGAATTCTGGGGGCCGTGGAACTTCAATCCTAACACCAAGCTGACCATCAAAGCCGGCACCCAGGAGACTAGCAGCACTGCGATATACAGCGGAACTATGCCGTTCGCCCCAATCGCATCGCTGTCCGATTATTCTCAGGCCCCTTTGACGATTTACAACGCGCCCACTGGTCCGTCTGCAAAGCCGGCCGTCATCGCGTTTATTCGCCCTGGGAACTGGGGCGCGTTCTTCGGCCTCGACACCGACAACAAGCTGAAATGGGGCGGCGGATCGCTCGGCAATAGCTCCAGGGAAATCGCCGATTCCAGCAACATCATGAATCTTTGGGCTGCCAACCCGACCGCGCCGACTTGGAACGGCCAAACGGTTTGGCGATCCGGAAACTTCGATCCGGCGACTAAAGTGGATCTGAACGCGCCAAACGCCACCAACGGCAACATGATTTTCAACCGCATCGCCGGAACAGGCAGCGGTATTGCTTCGTCCGGCCGCGTCGGCGCAATCAGCCTCCAGAACGGCGCAACGGCAGGCGCGGCCGCAGCCGTAACATTCGAGCGGGGCGGAGGTTTCTTTGTCAACTTCGGCCTGGATACCGACAACGTTCTCAAAGTGGGTGGCGGAAACCTGGGGGCAAATGCCTATCCGGTCATCCACGCCGGGAACTACAATAACTACATCAACCAGGCGCTGGTTCAGGTGGGTCTTGGCGGAGTCGGTTCCTATGGCATCTTTGCGGTTCTGGACAATGCCGCTCCAACCGCGACCGTTCAACCGGGAGTGGTTGTGGACGGTTCCATTCTCATCTACTCGTCTTGCGCCGCAAACTACAATAGCGGTCAAAGGCCTGCCGGAACTTGGCGCTGCATGGGATATGTAGTCAACCGGGATGCCAACACTCCTGACTCCGCGACCCTTTTCCAGCGAGTGACGTAA

Genome Context

Genome Context

Tertiary structure

PDB ID
dcd8ecf9a569fcfa8cd4d2ccab3294ff18595510bc8f78cd3c59ebdf27eb4bc5
ColabFold
Source ColabFold
Method ColabFold
Resolution 0,3060
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50

Literature

Title Authors Date PMID Source
A New High-Throughput Screening Method for Phages: Enabling Crude Isolation and Fast Identification of Diverse Phages with Therapeutic Potential Olsen,N.S., Hendriksen,N.B., Hansen,L.H. and Kot,W. 2020 — GenBank