Protein

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Genbank accession
AMO43039.1 [GenBank]
Protein name
short tail fiber protein
RBP type
TF
Evidence GenBank
Probability 1,00
TF
Evidence Phold
Probability 1,00
Protein sequence
MPLTRLDNLYSSKTGKYLYVSPDDFNATDELDNRGNSPLRPFKTIQRAFIEVARYSYLPGANNDRFDQFSIMLMPGNHYIDNRPGLVTETAVEGRYYDASNLLRANRQEVIDRAVAQVAVDHPDFYYPGDPQTGEWSRYKDSYRLIQKNREEIIDRAVAKISVDHPDFYYPQDAQTGEWSRYKDAYRLLQNNRNLIAQDAFDYMNGINPPSPLPNNYANKCIRDIGFLIDAISLDVHQGGGNKYTRKFVKNYFNEAGTDWVDAGLRGEESSSLTAFGHAIDLMKDAITNRYTSTSAPGSEYQDLTVTAGDPTYNDGTGTVPNTDENACSDVQSFIDNLYAFVSVVLNDSDLAANNGNFLLSNVLPAEVASDIVPDGEAKCKRDVGYFIDALSLDVHQAGGNVYTRKLAQNYFDETGNNWIANGLQGETAESITAFNEAIAKMQMAVTNQLFTYKDLTLTEGDAVYGTTNPQENLPSGNPAACADVQSLISTLGAIITTVVTDENLGNLPDETTSDLVPAGEVKCKRDAGYIVDGLVDDLGTEGNANTITNAKAYFDRFGNPISNGLLGEEAESVTAFNAIGYWAKRAINNMLFAKDLTISEGPAYAGANTAIISYNGSGNIAACQDVQATIDTLIRILTDVITVGNLDDLASIKVTGVLPSFNYNRALEEWQDNSIVDLANPDNVLYKFNAATGGCIVPRGCSLIGYDLRRTVVRPLYVPDPADTTQERTSVFNLTGGCYLWQFTIKDGDLSAQSPLYDASAGVGKVYFKKGSTDLAIPEYSHHKICIMTYADREDLDNYYDKVGKAFQQFQPTIDDGGLEALVQENRIVGPLSDSRTIENIRVDDSTTFTGNINSTRVINNVSNVENLAVGYEITSPDVNVSIPPNTRIESISGNNVTLSQTISGTGNKSFVASFGYTNITVTTKIDHGYFEGQYVAIINSGLSEEINGTWKVTAIDGNNPKVFEYEVYNTAAGLGLVSGQTYLSGAVGGVSTNAVVLAEIDSVESASPYVFNCSIRSTWGQCGMWADGSKATGFKSMVVAQYTGVSLQKDDRAFIRYDRLTNTWNQASLTDAFATIPYHTKGDAYWKDDWRNFHIRASDDAFIQNVSVFAVGFFDHFLMESGGDMSITNSNSNFGNTSLHSIGYKGFSFNQDKGGYVTDIVPPETINQNNIAINQWYTLDVDGSNSRTNHEKIYLAGDNIDDPENRPATSINGYRIGAKSEERLFVNLDRYPTEPSGPNEFSAELTPSGFKSWNVGIETLTPASANVDNYAQDAANLIEANKAFIQSEAYLYILQKYPDLGFKETINISKCERDIGYFVDAVVNDLRLGGNINSIQAAEGYYIGGQVAYISGELNETIDALDYVKNIMIAAMRNFDYLVRDVSTTDGSAIITLPSTQGILVGMTIAEYSPSDFTNGRLNSGAVANQANIPANAFVKRIISDTQLEMGVPGAKLNSGPTVEAVGDTSSAYVYFDMPNNGAWTSIQTQSDDSIIQDSQIDPNTGELLPECQNIATTIEGYFEQIFLILNEGYTSLGGREDDAYNAIIANKRFIAAEAVYRVANDPAYAGTKLGQGLLASTGETIEDACIDDVENTLAAIAYNVKFGGNNKAYEAAELYLTGAHVQGEEAESVAAFNIARDLAIQAMRQETIAIQGNHGLTQTLDLEVAPEYDANGALVTPPCADIATTITTLTALVTTGITGGALGSKTIPSFSSVTRVDATSDLTGLAARATLFTLATGNIGGNPNPHNLETGTPVRLVPKPVPGTNPDKRLIRLPNGFDTNTKYYVIAPGRNLYPENFALSNQVITVTEAAGTNLGASNPTRAAAAGIYRSLIAQPKIDTDGTALASGTGLRFNLVVNADGSITLGDIASGLDPIANGGSRYQQGDIVVISDAQVGGTGAPALEIEISSVTSAEYPGVFDSTAVNKLMLATSPENAAAGIYMYSPETDSVDPNVQIELSSFVLDNNYDLHQYKCNVVGASEIESSVAHIFDVPSANTTSQTVFVRIASGIQGSSLPELSGTSASISTQTLYYVRYVSNKRFTLHTTAADAESGDRALTFVSGTGVNFYIFANKRESPIRFDPEFTSATNSTGLWYVNVIDESSNGSPNYNRYSILSRFHGGSEQADDYQTKTDPTLDTRYLRIEDKRDKEDRVYRLRYVIPSYLETVRDPLNGFVIKTRTDDKRRLVPQRVLLKPIQGNPNTVASFYNPAGAGEQIGLTKSELISDQIRTIDPSVVDLLPEQQNLYDPYVTPNVIEFDSKIAATIQSARKVVPAGETDQFLEMTLFDHTIVNQSVKNEIFTVVSVGFIQGGNFTGNATQNTDANKVTWEVTQGTNKSSGTAYIQAVLDDITGSQKTLVLKNVEGIIEYDINSTVQFKQSFPPAGNATTTDGGGNVIVLAEGDIIGQLLDVPNSYGDPDKKDKSLRTNYLYRVEGANVYTVAPGDTITDDAGNTYYVAEIEDQGQFDDTFYIFDIDTLQQRIPNQQDGIYYLTCIRGNISPYPTGSGVGENFRNFKFSQPISQLYPLNYKNDPLWFQYDGLTGTKDTSIVDVPQTFSAADNYVHGLVTVNDAKGSETKEGIEDIIRTSALSKFFYTNTTTDSNGDIIDNRIRAQEGNATSGSEDRLIPISGDSEYPTERKLYVELRRPSIARSGNHTFEYLGFGPGNYSTGFPLRQEVVLTDKQDFYAQAKREDGGIVFYTGLNSNGDLYIGNKKVNAITGEETFLESAELLDSEDEDEDIGALVTTFDSPVTFNSTITVAGKSTFNGPLEINVEANEGDAIRVASNIAQGDDATLFRGSWRTVSDGDIVIAQNRIKSAVFILNARPKPGGETGQSYSFRTNYLAGEPSNIVPWQLDNTFYTSQNVEYGPGNQPEPGDVLVKGSSVGRSGSLGWIYSNQFKTIESQIQSITTNGSQNLTVNWIPTVTNASAGVTAFAKIRVINFSNPVVNGTWDIVSTGFNPSGTSFQFTISTPLTTGIIYNWADQGTGADIFVSSSNWKEVGVLGAESIRTYTDARGDFRIGVNTVARTSHSAVLTANVDAAFTDPRANLDVVGTAFISGRTLVSYDSNGAVTTNRYDQFNLNSDQRESLTGSTLTTQGFLAQDTALMVGGDSNDVENAATLRVATSDVTTPQTSTYRNGGRVGINTTLGLQPENELDRNLVVIGDGRITGNFLISDDISVDGGDINTTSGTFNFINENANILNLMGDGQLINIANNTTNDQSISIGGATQNQVVRIGAVAGTTVFSVHPKATNAAVDIASVNDAATNACQVAIGGAYENTNSTTLLGTRQTITAGTLEIGYNVAAGTGTARLFSQTKNVRLFDDDRTTEVNAFTSANNFNMGSLGGSTTIRNALKVQASLRADSNIILNGGTSAGIIEIVRGRFSTTPILHNTGSLDTPNIDFYKYNSTGRVIDTAGVTLWGSNSFLQGGGQIAGFDNLNTNDPSGLRAFGNYTFVFPVGGSGEGAAFDVNVAFDGTVTLTLVSSGTGYNDNETLTILDANVGGGGAPDITLQINGVNDPGNVYILPISTPAASDFDIGDLLLLDRGNLGSPDEIVVDGGGSVTGLRDQSKSEIVRVVGLTNLTNPSDTKGFRLAVQRAQEGTGDPTTGEGWTDHPDGCVIAKLSKQAAASFITGIDADGNDVLDEPRTGFGAGTTNVRMGVAEFGGVLTTQDLLRLSGSEIVGIADIISADVQVLQVNDGGDPAVVQFQVDSTNGDTILSGDLGVGQGYNKLTVDGSTGNTNIAGTLTVENTITFNGSTIPGNQLFTITNGGSSTTPLRTTFEVDSATGNLTMNGGNISIFGSDGTTPRLTFNNSSGDFTTYGSFSALGDGTSTFGGPVDIAGDLTVNGGDLIVKNESGTELFAVDDDGSINIGGITNFFSPTGGRKWEYSAESVVNAIANTNYFLNVQGNTILKLPAGAQMGDMIRIIDIGGTLTYNQSLVVRAPTLVSIQGTTSNTGGAMLSGVPTSQYTSTHNGGELVVQTPNAAFALVYAGTSTVDGNPGAPASKSGWYLIEV
Physico‐chemical
properties
protein length:4021 AA
molecular weight: 431361,80800 Da
isoelectric point:4,44256
aromaticity:0,08679
hydropathy:-0,24989

Domains

Domains [InterPro]
DC_0066
STR
1–159
DC_0066 DC_0231 DC_0231
DC_0231
STR
128–324
DC_0231 IPR009050
AMO43039.1
1 4021
Architecture
STR
STR
STR 1-583 | STR 886-4021
Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Taxonomy

  Name Taxonomy ID Lineage
Phage Cyanophage S-RIM32
[NCBI] 		1278479 Uroviricota > Caudoviricetes > Pantevenvirales > Bristolvirus > Bristolvirus rhodeisland
Host Synechococcus sp.
[NCBI] 		1131 cellular organisms > Bacteria > Bacillati > Cyanobacteriota/Melainabacteria group > Cyanobacteriota > Cyanophyceae

Coding sequence (CDS)

Coding sequence (CDS)

No CDS data available.

Genome Context

Genome Context

Tertiary structure

PDB ID
caa97f101e5ef4c2d24090f9d42d896af5722c748db8f7204af5994b18d88a86
AlphaFold3
Source AlphaFold3
Method AlphaFold3
Resolution 0,8466
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50