Protein

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Genbank accession
YP_010768060.1 [GenBank]
Protein name
tail fiber protein
RBP type
TF
Evidence UniProt/TrEMBL
Probability 1,00
TF
Evidence Phold
Probability 1,00
TF
Evidence RBPdetect
Probability 0,90
Protein sequence
MTQISVTRALAEVKALNDRIEKATRQATFISITVGGKVPNGSDLQATTNTIRANLQSVQDLIARRQAVKGAVVRSNAVTEVTINGVTMTVAEAIERKGSIDKERALLAVLQQQLNQNRVAVERNNVTMNQKLDMMIQTAVGKERKATEEELEAISKPYTASNITAPLDPNGLEAVIAKLEAEINGFVFEVDFVLSEANAKTLIEA
Physico‐chemical
properties
protein length:205 AA
molecular weight: 22231,14120 Da
isoelectric point:5,72820
aromaticity:0,02439
hydropathy:-0,13707

Domains

Domains [InterPro]
DC_0027
STR
1–205
DC_0027
Coil
Unmapped
6–26
Coil
YP_010768060.1
1 205
Architecture
STR
STR 1-205
Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Taxonomy

  Name Taxonomy ID Lineage
Phage Pseudomonas phage phiPsa315
[NCBI] 		1460363 Uroviricota > Caudoviricetes > Vandenendeviridae > Otagovirus > Otagovirus psa315
Host Pseudomonas syringae pv. actinidiae
[NCBI] 		103796 Bacteria > Proteobacteria > Gammaproteobacteria > Pseudomonadales > Pseudomonadaceae > Pseudomonas

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
YP_010768060.1 [NCBI]
Genbank nucleotide accession
NC_073688.1 [NCBI]
CDS location
range 62125 -> 62742
strand +
CDS
ATGACACAGATTTCCGTAACTCGCGCTCTGGCCGAAGTTAAAGCACTGAACGACCGCATCGAGAAAGCAACCCGACAGGCCACTTTCATCAGCATCACTGTTGGTGGTAAAGTTCCTAACGGTTCTGACCTGCAAGCAACAACCAACACCATCCGAGCTAACCTGCAATCGGTTCAAGACCTGATCGCACGTCGTCAGGCTGTGAAGGGCGCTGTTGTTCGTTCCAACGCTGTAACCGAAGTGACCATCAACGGCGTCACCATGACCGTCGCTGAGGCAATCGAGCGTAAGGGCTCCATCGACAAGGAGCGTGCCCTGCTGGCTGTTCTACAACAACAGCTCAACCAGAACCGCGTAGCAGTTGAACGCAACAACGTCACCATGAACCAGAAGCTGGACATGATGATTCAGACTGCTGTGGGCAAGGAGCGTAAAGCTACCGAGGAAGAACTGGAGGCCATCAGCAAGCCTTATACCGCATCGAACATCACTGCTCCACTTGACCCTAACGGGCTGGAAGCTGTGATCGCCAAGTTGGAAGCAGAAATCAACGGGTTTGTATTCGAAGTTGACTTCGTTCTGTCTGAGGCAAACGCTAAGACTCTGATCGAGGCGTAA

Genome Context

Genome Context

Tertiary structure

PDB ID
182f47735650f89657ab866084b5fbb9555d3d0a117e50611ec212f0267985e6
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,9514
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50

Literature

Title Authors Date PMID Source
Characterization of Pseudomonas phiPsa374-like phages Warring,S., Malone,L.M., Easingwood,R.A., Rigano,L., Frampton,R.A., Lopez Acedo,E., Templeton,M.D., Kleffmann,T., Bostina,M. and Fineran,P.C. 2024-10 — GenBank