Protein

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Genbank accession
YP_009787911.1 [GenBank]
Protein name
tail protein
RBP type
TF
Evidence GenBank
Probability 1,00
TF
Evidence RBPdetect
Probability 0,89
Protein sequence
MRKLTNFKFFYNTPFTDYQNTIHFNSNKERDDYFLNGRHFKSLDYSKQPYNFIRDRMEINVDMQWHDAQGINYMTFLSDFEDRRYYAFVNQIEYVNDVVVKIYFVIDTIMTYTQGNVLEQLSNVNIERQHLSKRTYNYMLPMLRNNDDVLKVSNKNYVYNQMQQYLENLVLFQSSADLSKKFGTKKEPNLDTSKGTIYDNITSPVNLYVMEYGDFINFMDKMSAYPWITQNFQKVQMLPKDFINTKDLEDVKTSEKITGLKTLKQGGKSKEWSLNDLSLSFTKLQEMMLSKKDEFKHMIRNEYMTIEFYDWNGNTMLLDAGKISQKTGVKLRTKSIIGYHNEVRVYPVDYNSAENDRPILSKNKDILIDTGSFLNTNITFNSFAQVPILINNGILGQSQQANRQRNAESQLITSRIDNVLNGSDPKSRFYDAVSVASNLSPTALFGKFNEEYNFYKQQQAEYKDLALQPPSVTESEMGNAFQIANSINGLTMKISVPSPKEITFLQKYYMLFGFEVNDYNTFIEPINSMTICNYLKCTGTYTIRDIDPMLMEQLKAILESGVRFWHNDGSGNPMLQNPLNNKFRVGV
Physico‐chemical
properties
protein length:587 AA
molecular weight: 68478,85400 Da
isoelectric point:6,69492
aromaticity:0,12606
hydropathy:-0,54480

Domains

Domains [InterPro]
IPR031772
TAS
3–115
IPR031772
IPR031772
TAS
3–110
IPR031772
DC_0080
STR
84–428
DC_0080
YP_009787911.1
1 587
Architecture
TAS
STR
TAS 3-83 | STR 84-428 |
Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Taxonomy

  Name Taxonomy ID Lineage
Phage Staphylococcus phage SCH1
[NCBI] 		1913581 Viruses > Duplodnaviria > Heunggongvirae > Uroviricota > Caudoviricetes
Host Staphylococcus aureus
[NCBI] 		1280 cellular organisms > Bacteria > Bacillati > Bacillota > Bacilli > Bacillales

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
YP_009787911.1 [NCBI]
Genbank nucleotide accession
NC_047788 [NCBI]
CDS location
range 8121 -> 9884
strand -
CDS
ATGAGAAAATTAACAAATTTTAAATTTTTCTATAACACACCGTTTACTGATTATCAAAATACGATTCATTTTAATAGTAATAAAGAGCGTGATGATTATTTTTTAAATGGACGTCATTTTAAATCATTAGACTATTCCAAACAACCGTATAATTTTATACGTGATAGAATGGAAATCAATGTTGATATGCAGTGGCATGACGCACAAGGGATTAACTACATGACGTTTTTATCAGATTTTGAGGACAGACGTTATTATGCGTTTGTAAATCAAATCGAATATGTGAATGATGTTGTGGTTAAAATATATTTTGTGATTGATACTATTATGACGTACACGCAAGGTAATGTATTAGAGCAACTCTCAAACGTTAATATTGAACGTCAACACTTATCAAAACGCACGTATAACTATATGTTACCAATGTTACGTAACAATGATGATGTGTTAAAAGTATCAAATAAAAACTATGTGTATAACCAAATGCAACAGTATTTGGAAAATTTAGTGTTATTCCAGTCAAGCGCTGATTTATCAAAGAAATTTGGTACGAAAAAAGAGCCAAACTTAGATACGTCTAAGGGTACGATATATGACAATATCACATCACCAGTCAACTTATACGTTATGGAATATGGTGACTTTATTAACTTTATGGATAAAATGAGTGCATATCCATGGATTACACAAAACTTTCAAAAGGTTCAAATGTTACCTAAAGACTTTATTAATACAAAAGATTTAGAGGACGTTAAAACAAGTGAAAAAATTACTGGATTAAAGACGTTAAAACAAGGTGGAAAATCAAAAGAATGGAGTTTAAACGATTTATCATTAAGTTTCACAAAGCTTCAAGAAATGATGTTGTCTAAAAAAGACGAGTTTAAACATATGATACGTAATGAGTACATGACGATTGAATTTTACGATTGGAACGGGAATACGATGTTACTCGACGCTGGTAAGATTTCACAAAAAACAGGTGTTAAGTTACGTACAAAGTCAATCATTGGTTATCATAATGAAGTGCGAGTTTATCCAGTAGATTATAACAGTGCTGAAAATGATAGACCGATACTTTCTAAAAATAAAGATATATTAATTGATACAGGTTCATTCTTAAATACAAATATAACATTTAATAGTTTTGCGCAAGTCCCTATATTAATTAATAACGGAATTTTAGGGCAATCACAACAAGCCAATAGACAGCGTAATGCAGAAAGTCAATTAATCACAAGTCGTATAGATAATGTATTAAATGGTAGTGACCCAAAATCACGTTTTTATGACGCTGTAAGTGTGGCAAGTAATTTAAGTCCAACGGCTTTATTTGGTAAATTTAATGAAGAATATAATTTCTACAAACAACAACAAGCAGAATATAAAGATTTAGCCTTACAACCGCCCTCAGTGACTGAATCAGAAATGGGAAACGCATTTCAAATCGCAAATAGTATTAATGGTTTAACTATGAAGATTAGTGTACCGTCACCTAAAGAAATTACATTTTTACAAAAATATTATATGTTGTTTGGTTTTGAAGTGAATGACTATAACACATTTATTGAACCAATTAACAGTATGACTATATGCAACTATTTAAAATGTACAGGTACGTATACAATACGTGACATTGACCCTATGTTAATGGAACAATTAAAAGCGATTTTGGAATCTGGTGTGAGATTTTGGCATAATGACGGTTCAGGTAATCCAATGTTACAGAACCCGTTAAACAATAAATTTAGAGTAGGTGTATAA

Genome Context

Genome Context

Tertiary structure

PDB ID
17b9631a166e34ea2526f9b81807b2570dbe76a4daa1010c792cf9c4d6ef78f0
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,3941
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50

Literature

Title Authors Date PMID Source
Antibacterial composition for prophylaxis and treatment of hospital infections (variants), strains of bacteriophages, used for obtaining thereof Aleshkin,A.V., Volozhantsev,N.V., Verevkin,V.V., Krasilnikova,V.M., Myakinina,V.P., Popova,A.V. and Svetoch,E.A. 2016-10 — GenBank