Protein

View in Explore
Genbank accession
XYR96024.1 [GenBank]
Protein name
tail fiber protein
RBP type
TF
Evidence Phold
Probability 1,00
TSP
Evidence RBPdetect
Probability 0,83
Protein sequence
MSAINVNSITGRTGSHGPVLTGVTTISSDLHVGSGLSVTGVSTFSNTVVGGATTELVVGGDARITGILTIGTGSVTIDGTSGSSSITGVSTAGIGSVYGVDSINDLGFPTTGPLSNRNLVHNGAMAIAQRGAGPVTVTVDGEYLIDRFKTYSSTFNTFSVDQSQDTDVPAGQGFQYSYKLRVSANAAGTPAFGYVLLGYSFEGYDINQLEYGNANCKTVAVSFWVKSSVAGTYGFCFRNNTATKNYTGEYSIQAANTWEYKTFTIPGADSGTFESTNGKGLEILMGIDVGTTFHGTANTWHNSNLFGTPGMTNTWSDTLNNDFYVTGLQVEVGTKSTPFERRSYGDDLQKCMRYFQMLPNGVSVTRSANGVAYSDARLEGSIVIPRMRAAPTTKASDGSATISTGMLNVNYGGETNAELNFIVTSGSSTHILNPNYKNTNNANNNLGTAFLFGFTTEDIYISAEL
Physico‐chemical
properties
protein length:465 AA
molecular weight: 48940,42160 Da
isoelectric point:5,07052
aromaticity:0,09892
hydropathy:-0,12925

Domains

Domains [InterPro]

No domain annotations available.

Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Tail Spike Domain Segmentation

Tail Spike Domain Segmentation

This protein has been segmented into three structural domains: N-terminal, central domain, and C-terminal.

Domain Layout
N-terminal
Central
C-terminal
XYR96024.1
1 465
Domain Start End Length (AA) Confidence
N-terminal 1 42 42 0,5802
Central domain 43 241 200 0,2064
C-terminal 242 465 223 0,9206
Legend: N-terminal Central domain C-terminal
3D Structure with Domain Coloring

The structure is colored according to the domain segmentation: N-terminal (blue), Central (green), C-terminal (pink).

Domain Coloring
N-terminal
1-42
Central
43-241
C-terminal
242-465

Taxonomy

  Name Taxonomy ID Lineage
Phage Synechococcus phage RB11-B
[NCBI] 		3412546 Viruses >
Host Synechococcus sp. MW02
[NCBI] 		1620844 Cyanobacteriota > Cyanophyceae > Synechococcales > Synechococcaceae > Synechococcus >

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
XYR96024.1 [NCBI]
Genbank nucleotide accession
PV261925.1 [NCBI]
CDS location
range 193536 -> 194933
strand -
CDS
ATGTCAGCAATTAATGTAAATTCTATTACAGGTAGGACTGGTTCTCACGGACCAGTGCTGACGGGTGTGACTACCATTTCAAGTGACTTACATGTTGGTAGTGGTTTATCTGTAACTGGGGTATCAACATTTAGTAATACAGTAGTTGGTGGTGCCACAACAGAGTTGGTCGTTGGTGGTGATGCAAGAATCACTGGTATTCTAACAATTGGTACTGGTTCAGTTACTATTGATGGAACATCAGGTAGTTCAAGTATCACTGGTGTATCCACAGCAGGTATTGGTTCTGTCTATGGTGTTGATAGTATTAATGACTTAGGTTTTCCTACTACTGGTCCATTAAGTAATCGTAATTTGGTCCACAACGGTGCGATGGCAATAGCACAAAGAGGAGCAGGACCAGTAACTGTAACCGTTGACGGGGAATACTTAATTGACAGATTTAAAACGTACTCCAGCACTTTTAATACTTTTAGCGTTGATCAATCACAAGACACGGATGTACCTGCAGGCCAAGGATTTCAATATTCATATAAATTGAGAGTCAGCGCTAACGCTGCAGGAACACCTGCTTTTGGCTACGTGCTTCTTGGATATTCTTTTGAAGGATATGATATAAATCAGCTTGAATATGGAAACGCAAATTGTAAAACAGTAGCCGTTTCTTTTTGGGTAAAATCTAGTGTTGCTGGCACTTATGGTTTTTGTTTTAGAAACAACACAGCCACTAAAAACTACACTGGAGAGTATTCAATTCAAGCTGCAAATACTTGGGAGTATAAAACTTTTACAATCCCTGGGGCAGATTCAGGAACTTTTGAAAGTACAAACGGGAAAGGTCTAGAAATACTGATGGGTATTGATGTTGGTACTACTTTTCATGGTACAGCAAACACTTGGCATAATTCAAACTTATTTGGAACACCTGGCATGACTAATACTTGGTCAGATACGCTTAATAATGACTTTTATGTTACTGGATTGCAGGTAGAAGTAGGAACTAAAAGTACACCATTTGAACGTCGGAGCTATGGGGATGATCTTCAAAAGTGTATGCGCTATTTCCAAATGCTGCCTAATGGCGTATCGGTCACGAGAAGTGCAAATGGTGTAGCATACTCAGATGCACGGTTAGAAGGATCTATAGTTATTCCAAGAATGAGGGCTGCACCTACAACAAAAGCTAGTGATGGATCAGCTACAATCTCAACAGGTATGCTAAATGTAAATTATGGAGGTGAAACAAACGCAGAACTTAATTTTATTGTTACTAGCGGCTCCTCTACCCACATTTTAAATCCAAACTACAAAAATACGAACAATGCAAACAATAACCTAGGAACGGCGTTTTTGTTTGGTTTCACAACAGAAGACATCTACATTTCTGCGGAGTTATGA

Genome Context

Genome Context

Tertiary structure

PDB ID
c2749821fea82d3b3e4277c9c7b99bda9967a092b0074f8f92b16042feae7b07
ColabFold
Source ColabFold
Method ColabFold
Resolution 0,8151
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50