Protein

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Genbank accession
AUS02961.1 [GenBank]
Protein name
tail spike protein
RBP type
TF
Evidence Phold
Probability 1,00
TSP
Evidence DepoScope
Probability 1,00
TSP
Evidence RBPdetect
Probability 0,91
TSP
Evidence RBPdetect2
Probability 0,94
Protein sequence
MLLRFILGDNMTLRQVSNRMIDGAAISVLDFGAKGDGITNDAQAFIDAFAYASDNNIGTVDIGSATYVVGGNDYDLRLYPPSNVYIKSNNATLKMQENSAQLQMLLYYRNVTNCGILGHINFDGNRDNNPPIDVNDLGQNNLVIGHGTENAYFESVYSYSAAQDAIYLGTNGSASNPTPKSIAIGKAICESAGRNGMSLCQVAGLTIDYLETRYTIGSAPQAGLDIEPDFYTDQLNGVVIDNLVTHGNAGAGLGTLIHHPVNQTGVTINRIECHGNGTNGVEFFRGNGIKILSGRIHSNTDSGVYIANAKDIKICAEIYNNGSPGILGAPTDYFWDESPHNGPAYVEYRNWNWDFSGCKIQNNDALGNVQLQGVDDTAVGSLRNVNLDNCYIANDRPGGTLNAQYALYIGSDVNDYKGQAQLSSGTTGILAVSSDNTYGFIHREKYVEDITFTDTNIVANSGSTQTFVIPYHHQPDLIASSLHSNLPTGLVYQVYSYGNTQIAVKVMNVTGADISSGDLSLRLEITHTY
Physico‐chemical
properties
protein length:529 AA
molecular weight: 57024,41200 Da
isoelectric point:4,71840
aromaticity:0,08885
hydropathy:-0,22817

Domains

Domains [InterPro]
IPR011050
STR
24–462
IPR011050
IPR012334
STR
25–336
IPR012334 IPR006626 IPR006626
IPR012334
STR
25–325
IPR012334
IPR006626
Unmapped
148–170
IPR006626 IPR006626 IPR006626 IPR006626
AUS02961.1
1 529
Architecture
STR
STR 24-462 |
Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Tail Spike Domain Segmentation

Tail Spike Domain Segmentation

This protein has been segmented into three structural domains: N-terminal, central domain, and C-terminal.

Domain Layout
N-terminal
Central
C-terminal
AUS02961.1
1 529
Domain Start End Length (AA) Confidence
N-terminal 1 39 39 0,9594
Central domain 40 441 403 0,9915
C-terminal 442 529 87 0,9855
Legend: N-terminal Central domain C-terminal
3D Structure with Domain Coloring

The structure is colored according to the domain segmentation: N-terminal (blue), Central (green), C-terminal (pink).

Domain Coloring
N-terminal
1-39
Central
40-441
C-terminal
442-529

Taxonomy

  Name Taxonomy ID Lineage
Phage Vibrio phage 2.275.O._10N.286.54.E11
[NCBI] 		1881285 Viruses > Duplodnaviria > Heunggongvirae > Uroviricota > Caudoviricetes
Host Vibrio cyclitrophicus
[NCBI] 		47951 cellular organisms > Bacteria > Pseudomonadati > Pseudomonadota > Gammaproteobacteria > Vibrionales

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
AUS02961.1 [NCBI]
Genbank nucleotide accession
MG592671.1 [NCBI]
CDS location
range 227156 -> 228745
strand +
CDS
TTGCTCCTGAGATTTATTTTAGGAGATAATATGACTTTAAGACAAGTTAGTAATAGAATGATTGATGGTGCTGCTATTAGTGTTCTTGATTTTGGAGCAAAAGGAGATGGGATTACAAATGACGCCCAAGCATTTATAGATGCGTTTGCATACGCTTCTGATAATAATATTGGTACAGTCGATATAGGATCAGCCACATATGTTGTGGGAGGTAATGATTATGATTTGCGATTATATCCACCATCAAATGTATATATAAAATCAAACAATGCCACTTTAAAGATGCAAGAAAATTCAGCACAGCTCCAAATGCTTCTATATTATCGTAATGTTACAAATTGTGGTATTTTAGGGCATATTAATTTTGATGGTAACCGTGATAATAATCCACCTATTGATGTTAATGATTTAGGACAAAATAATTTAGTTATCGGGCACGGTACTGAAAATGCCTATTTCGAGAGTGTGTACAGTTACAGCGCAGCTCAAGATGCTATATATCTTGGTACTAATGGTAGTGCAAGCAATCCAACACCTAAAAGTATTGCAATAGGTAAAGCAATTTGTGAATCAGCTGGGCGCAATGGGATGTCACTATGTCAAGTAGCTGGACTAACTATTGATTACTTAGAGACTAGATACACTATAGGCTCAGCACCACAAGCAGGTTTGGATATTGAACCTGACTTTTATACTGACCAATTAAATGGCGTGGTTATCGATAACTTAGTAACTCATGGTAATGCTGGGGCAGGTTTAGGGACTCTTATTCATCATCCAGTAAATCAAACAGGTGTTACTATTAATCGTATTGAATGTCATGGTAATGGAACTAATGGTGTAGAGTTCTTTAGAGGGAATGGGATTAAAATTCTAAGTGGGCGGATACATAGCAATACTGATTCAGGTGTCTATATTGCAAATGCTAAAGATATTAAGATTTGTGCTGAGATATATAATAATGGATCTCCTGGTATTCTAGGAGCACCTACTGATTACTTTTGGGATGAAAGTCCACATAATGGGCCAGCATATGTAGAATATAGAAATTGGAACTGGGATTTCTCAGGATGCAAAATCCAAAATAATGATGCACTTGGCAATGTTCAACTCCAGGGAGTAGATGATACAGCAGTAGGGTCACTTCGTAATGTGAATCTAGATAATTGCTATATTGCTAATGATCGTCCAGGAGGGACACTCAATGCTCAATATGCGCTTTATATTGGATCAGATGTGAACGATTACAAAGGACAAGCTCAACTTAGCTCAGGAACTACTGGTATATTAGCAGTATCTTCTGATAATACCTATGGGTTTATTCATAGAGAAAAATATGTTGAGGATATAACATTCACAGATACCAACATTGTTGCAAACAGCGGTTCTACGCAGACATTTGTTATTCCTTACCATCACCAACCTGATTTGATTGCTTCTAGCTTGCATTCTAATCTACCAACTGGTCTTGTGTATCAAGTTTATAGTTATGGTAATACTCAGATTGCAGTTAAGGTGATGAATGTTACTGGTGCTGATATCTCTAGTGGTGATCTAAGCTTGCGCTTGGAAATCACTCACACCTATTAA

Genome Context

Genome Context

Tertiary structure

PDB ID
9613cd11727ea5adf4c519c1466c20f98ffecd9a8ac1f88816c1a89e10f52f90
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,8452
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50

Literature

Title Authors Date PMID Source
A major lineage of nontailed dsDNA viruses as unrecognized killers of marine bacteria Kauffman,K.M., Hussain,F.A., Yang,J., Arevalo,P., Brown,J.M., Chang,W.K., VanInsberghe,D., Elsherbini,J., Cutler,M.B., Kelly,L. and Polz,M.F. 2018-01-24 — GenBank