Protein

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Genbank accession
QDB70281.1 [GenBank]
Protein name
hypothetical protein
RBP type
TSP
Evidence DepoScope
Probability 0,95
Protein sequence
MIDMAINGERLTADELNTLLDKGTHVSVLNTDITGPGYISNITASVYLDSCRMEDTIAVLLDNDHNRVINSQINNGGVRFVNVVSGYAYTQQTSCYRSHGVSCQ
Physico‐chemical
properties
protein length:104 AA
molecular weight: 11370,55200 Da
isoelectric point:4,79883
aromaticity:0,05769
hydropathy:-0,14327

Domains

Domains [InterPro]

No domain annotations available.

Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Tail Spike Domain Segmentation

Tail Spike Domain Segmentation

This protein has been segmented into three structural domains: N-terminal, central domain, and C-terminal.

Domain Layout
N-terminal
Central
C-terminal
QDB70281.1
1 104
Domain Start End Length (AA) Confidence
N-terminal 1 10 10 0,7831
Central domain 11 93 84 0,8444
C-terminal 94 104 10 0,8225
Legend: N-terminal Central domain C-terminal
3D Structure with Domain Coloring

The structure is colored according to the domain segmentation: N-terminal (blue), Central (green), C-terminal (pink).

Domain Coloring
N-terminal
1-10
Central
11-93
C-terminal
94-104

Taxonomy

  Name Taxonomy ID Lineage
Phage Aeromonas phage CF8
[NCBI] 		2575324 Viruses > Duplodnaviria > Heunggongvirae > Uroviricota > Caudoviricetes
Host Aeromonas hydrophila
[NCBI] 		644 cellular organisms > Bacteria > Pseudomonadati > Pseudomonadota > Gammaproteobacteria > Aeromonadales

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
QDB70281.1 [NCBI]
Genbank nucleotide accession
MK774614 [NCBI]
CDS location
range 109763 -> 110077
strand -
CDS
ATGATTGATATGGCAATCAACGGGGAGCGTTTAACAGCCGATGAGCTTAACACGTTATTGGATAAAGGTACTCACGTGTCAGTTCTAAACACCGATATAACTGGACCTGGCTACATTTCCAATATAACCGCATCGGTATATCTAGATTCTTGCAGGATGGAAGATACAATAGCTGTTTTATTAGATAATGACCATAACCGTGTAATAAATAGTCAAATTAATAACGGTGGTGTTCGATTTGTAAACGTTGTTTCTGGCTATGCTTATACTCAGCAAACAAGTTGTTATCGCAGTCATGGTGTTTCCTGTCAATAA

Genome Context

Genome Context

Tertiary structure

PDB ID
65356b9a7b26b5b7e9c106dae4bf2af0f049b0f4c6968b884bfa677272de13b2
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,7421
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50

Literature

Title Authors Date PMID Source
Complete genome sequence of Aeromonas hydrophila bacteriophage CF8 Rai,S., Tyagi,A., Naveenkumar,B.T. and Singh,N.K. 2020-04-30 — GenBank