Protein

View in Explore
Genbank accession
QHI00614.1 [GenBank]
Protein name
tail fiber protein
RBP type
TSP
Evidence DepoScope
Probability 1,00
TF
Evidence GenBank
Probability 1,00
TF
Evidence Phold
Probability 1,00
TF
Evidence RBPdetect
Probability 0,90
TF
Evidence RBPdetect2
Probability 0,94
TF
Evidence UniProt/TrEMBL
Probability 1,00
Protein sequence
MAESNIQINALPQATTPLSDADIFHCKQGIVDKRVTLADLLFPHSSLSNNPHNVTKAQVGLGNVTNEEQLVKARNLGDLPNVEMAQQNLNVYSKEAVDSVVRTHINDKNNPHNTTKSQVGLGNVENYTVALSYTDASANKYVTAKVVNDLYKMIQGMYPIGHRIYTDNSTNPSNYIPVGTWALTGQGRVSVGYDAGNSSRPVGAKFGSSTVTIDVANLPAHTHGVTVTGGNHSHGAYGSTTGAGAHSHVASGSTSVDGDHSHTFELDDGSKGWGRAEQAGTYANGAQRTSTAGSHSHYVSLATNTVGDHAHGVNIVVNASGNLSMSGTSNPTGSGQALNIEQPSEVVYIWKRVS
Physico‐chemical
properties
protein length:354 AA
molecular weight: 37271,39990 Da
isoelectric point:6,39305
aromaticity:0,05650
hydropathy:-0,42119

Domains

Domains [InterPro]
DC_1039
STR
1–354
DC_1039
IPR053827
ATT
154–353
IPR053827
QHI00614.1
1 354
Architecture
STR
ATT
STR 1-153 | ATT 154-354
Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Tail Spike Domain Segmentation

Tail Spike Domain Segmentation

This protein has been segmented into three structural domains: N-terminal, central domain, and C-terminal.

Domain Layout
N-terminal
Central
C-terminal
QHI00614.1
1 354
Domain Start End Length (AA) Confidence
N-terminal 1 142 142 0,9879
Central domain 143 341 200 0,0090
C-terminal 342 354 12 0,9957
Legend: N-terminal Central domain C-terminal
3D Structure with Domain Coloring

The structure is colored according to the domain segmentation: N-terminal (blue), Central (green), C-terminal (pink).

Domain Coloring
N-terminal
1-142
Central
143-341
C-terminal
342-354

Taxonomy

  Name Taxonomy ID Lineage
Phage Salmonella phage vB_SenM_SB18
[NCBI] 		2698415 Uroviricota > Caudoviricetes > Andersonviridae > Kolesnikvirus > Kolesnikvirus Ea214
Host Salmonella enterica subsp. enterica serovar Infantis
[NCBI] 		595 Pseudomonadota > Gammaproteobacteria > Enterobacterales > Enterobacteriaceae > Salmonella > Salmonella enterica

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
QHI00614.1 [NCBI]
Genbank nucleotide accession
MK759884.1 [NCBI]
CDS location
range 46102 -> 47166
strand +
CDS
ATGGCTGAAAGTAACATTCAGATTAACGCCTTGCCACAGGCAACGACACCGCTCTCTGATGCTGACATTTTCCACTGTAAGCAAGGTATCGTAGATAAGCGCGTAACTCTCGCTGACTTACTTTTCCCTCACTCAAGCCTGAGCAATAACCCACATAATGTGACAAAGGCTCAGGTAGGTTTGGGTAATGTAACCAACGAAGAACAGCTTGTCAAGGCTCGGAACTTGGGTGACCTCCCTAACGTGGAGATGGCACAGCAGAACCTTAACGTTTACTCTAAAGAGGCTGTAGATAGTGTTGTACGAACCCACATCAATGATAAGAACAACCCGCACAATACGACCAAAAGTCAAGTTGGATTGGGAAACGTTGAGAACTACACCGTTGCCTTGTCGTATACGGACGCATCAGCGAACAAGTATGTTACGGCGAAAGTTGTAAACGACCTGTACAAGATGATTCAGGGGATGTACCCTATCGGTCACAGAATCTATACAGATAACTCTACAAACCCCTCGAACTACATTCCAGTAGGCACTTGGGCGTTAACTGGTCAGGGGCGTGTCTCAGTTGGTTATGATGCTGGTAACAGTTCAAGACCTGTTGGTGCAAAGTTCGGTTCATCAACTGTCACAATTGACGTTGCAAACCTTCCTGCACATACCCACGGGGTTACTGTGACAGGTGGTAATCACAGTCATGGTGCTTATGGGTCAACAACTGGTGCAGGTGCTCACAGTCACGTAGCTTCAGGAAGCACCAGTGTAGACGGTGACCACAGCCACACCTTCGAGTTAGATGATGGCTCTAAAGGGTGGGGTCGTGCTGAACAGGCTGGTACATATGCTAATGGTGCGCAGAGGACAAGCACTGCTGGTAGCCACAGCCACTACGTCTCACTTGCTACCAACACCGTTGGTGACCACGCTCATGGTGTAAACATTGTGGTTAACGCATCAGGTAACCTGTCAATGTCTGGTACATCGAACCCTACAGGTTCTGGTCAGGCTCTGAATATTGAACAGCCGTCAGAAGTTGTTTATATCTGGAAACGTGTATCTTAA

Genome Context

Genome Context

Tertiary structure

PDB ID
bbfdb43b42243e8e2c9c09a960e1c4de48a0869ce24b48811c290d9cff766446
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,7813
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50

Literature

Title Authors Date PMID Source
Whole genome sequence analysis of broad host range Salmonella enterica bacteriophages Bhandare,S.G., Colavecchio,A., Emond-Rheault,J.-G., Hamel,J., Kukavica-Ibrulj,I., Boyle,B., Levesque,R.C. and Goodridge,L. 2024-03-29 — GenBank