Protein

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Genbank accession
XUJ02913.1 [GenBank]
Protein name
putative tail fiber protein
RBP type
TSP
Evidence RBPdetect
Probability 0,89
TF
Evidence RBPdetect2
Probability 0,82
Protein sequence
MALVIHYTRNEDGTFDVKRYRDNPMNFVVNHVPDGVPVRVFIDEIGEDNDVTEDFEALKENATFHIVESAGGGAIKGVMKIFSVILKPLAKLLSPSVKGASSNLANSQADSPNNSLTDRNNKARPYERSYDICGTVQTIPNNLMSTYKVFNAAGKIVEYGYYDAGRGYLDIHPEGITDGDTRVSDITGTSVAVYAPYTSPNNTSTPQVMVGDPIEQGLYITVESNEVDGVVLKAPNGLGISFSYMSGYPSLSGNIGTIYDPTGGSDFSGVLVPNDTFSLVSAWTNTDVDLSGGGYQVVSVSEGTVTFIVPGGLIGRWQEIRPGSFFRGDGEASLQPDNTYEKTLTDWVSINRTEVERIVANIAAANGMYKDNGKSKTLASVTAEIQYQLLDENSAPYGPIYTAQGTVSGRTPDYNGVTIYADLPVVSRVRVRARRVTDLDFNFEGSVVDEITYVNLYGQTRDNTPHYGNRTTVHSMRKQTPRAAEVKQPQLRMIATEMVYKYLGNGVFEDTMTPNTQAVQSLIRLARDPDVGGLNLTVRNMDKLLAVQNEVEAYFGDKQAGEFCYTFDDYKTTMQDIVSTIADAIFCTPYRRGADILLDFERPRMGPEMVFTHRSKAGTSEKWTRTFNDAQVFDSLKFSYIDPKTNVKETITIPETGGLKTETYDSKGIRNYKQAFWAANRRHQKNILKKISVSFTATEEGIFALPNRAVSVVKGSRMSTYDGYVTAVNGLTVELSQPVKFTSGDDHYLVLKLRDGGVQSVRVVPGAHDRQVIMTSVPQEAIYTGNSALKTEFSFGNEARHNAQMILVSTVDPGDDRTVKITGFNYDKDFYKFDNVPPFGRAFSNGFDNGFN
Physico‐chemical
properties
protein length:852 AA
molecular weight: 93914,88530 Da
isoelectric point:5,27275
aromaticity:0,09859
hydropathy:-0,36831

Domains

Domains [InterPro]
DC_0118
STR
1–686
DC_0118 DC_0808
NF040662
Unmapped
352–832
NF040662
XUJ02913.1
1 852
Architecture
STR
RBD
STR 1-686 | RBD 703-846 |
Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Tail Spike Domain Segmentation

Tail Spike Domain Segmentation

This protein has been segmented into three structural domains: N-terminal, central domain, and C-terminal.

Domain Layout
N-terminal
Central
C-terminal
XUJ02913.1
1 852
Domain Start End Length (AA) Confidence
N-terminal 1 229 229 0,9618
Central domain 230 428 200 0,6995
C-terminal 429 852 423 0,1656
Legend: N-terminal Central domain C-terminal
3D Structure with Domain Coloring

The structure is colored according to the domain segmentation: N-terminal (blue), Central (green), C-terminal (pink).

Domain Coloring
N-terminal
1-229
Central
230-428
C-terminal
429-852

Taxonomy

  Name Taxonomy ID Lineage
Phage Salmonella phage SGP009
[NCBI] 		3425171 Viruses >
Host Salmonella gallinarum
[NCBI] 		594 cellular organisms > Bacteria > Pseudomonadati > Pseudomonadota > Gammaproteobacteria > Enterobacterales

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
XUJ02913.1 [NCBI]
Genbank nucleotide accession
PV657135 [NCBI]
CDS location
range 38052 -> 40610
strand +
CDS
TTGGCGCTAGTAATCCACTATACCCGTAACGAAGACGGCACATTTGACGTTAAACGTTATCGCGATAATCCGATGAACTTCGTCGTGAACCACGTTCCCGATGGGGTGCCGGTTCGCGTTTTCATCGACGAAATCGGAGAAGATAACGATGTAACAGAAGACTTCGAAGCACTGAAAGAAAACGCGACTTTCCACATTGTGGAATCTGCCGGTGGTGGCGCTATTAAAGGCGTCATGAAGATTTTTAGCGTTATCCTTAAACCGCTGGCGAAACTACTATCACCATCCGTGAAAGGGGCGTCCTCTAACCTGGCGAACTCGCAGGCGGATTCCCCGAACAACAGTCTCACTGACCGTAACAACAAGGCGCGCCCGTACGAACGCAGCTACGACATCTGCGGAACGGTGCAAACTATCCCAAATAACCTTATGTCTACGTATAAGGTGTTTAACGCCGCTGGTAAAATTGTAGAGTACGGCTATTACGACGCCGGGCGTGGATACCTCGACATACACCCGGAAGGTATAACGGACGGGGATACCCGTGTATCGGATATAACAGGTACGTCGGTTGCCGTGTACGCACCATATACATCGCCCAATAACACATCTACACCACAGGTCATGGTTGGGGACCCCATAGAGCAAGGCCTATACATTACCGTAGAATCTAACGAAGTTGACGGCGTGGTTCTTAAAGCACCGAACGGTCTGGGCATTTCTTTCTCTTACATGTCCGGGTATCCGTCTTTGTCTGGAAACATTGGCACGATATATGACCCAACAGGTGGTTCGGATTTTTCTGGGGTGTTGGTGCCTAATGATACATTTTCGCTGGTGTCAGCGTGGACAAATACAGACGTTGACCTCTCCGGCGGCGGATATCAGGTAGTCAGCGTGTCCGAAGGGACCGTTACCTTTATCGTGCCTGGCGGCCTTATCGGGCGGTGGCAAGAAATAAGACCCGGTTCATTTTTCCGCGGTGATGGAGAGGCCTCGCTGCAACCAGACAACACGTATGAGAAAACATTAACCGATTGGGTTTCAATAAACCGTACCGAGGTTGAGCGTATAGTCGCCAATATCGCCGCCGCGAACGGCATGTATAAAGACAACGGCAAATCGAAAACATTGGCGTCTGTAACCGCCGAAATACAGTATCAATTGCTCGATGAAAACAGCGCTCCTTACGGACCGATATATACTGCGCAAGGAACTGTGTCCGGGCGTACACCGGACTACAACGGCGTCACTATTTACGCCGACCTGCCGGTTGTGTCACGGGTGCGGGTGCGCGCCAGAAGGGTAACAGACCTGGACTTTAATTTCGAGGGGTCTGTAGTCGATGAGATAACGTACGTTAACTTATACGGGCAAACACGTGACAACACCCCACACTACGGCAACAGAACAACAGTACACTCGATGCGCAAGCAGACCCCACGTGCTGCGGAAGTAAAGCAACCGCAGTTGCGTATGATTGCTACTGAAATGGTGTACAAATACCTCGGTAACGGTGTTTTCGAAGATACGATGACACCTAATACACAGGCTGTACAATCCCTCATCCGCCTGGCACGTGACCCGGACGTGGGTGGTTTAAACCTGACGGTACGCAACATGGATAAGTTACTTGCCGTGCAGAACGAGGTCGAAGCGTATTTTGGCGACAAACAGGCCGGAGAATTTTGTTACACGTTTGATGACTATAAAACCACTATGCAGGATATAGTTAGTACTATAGCCGACGCTATCTTCTGTACTCCATATAGGCGTGGGGCGGATATCCTTCTCGATTTTGAACGCCCTCGCATGGGCCCTGAGATGGTGTTCACCCACCGAAGTAAGGCCGGTACTTCCGAAAAATGGACCAGAACCTTTAACGATGCTCAGGTGTTCGATAGTCTTAAATTCTCGTACATAGACCCTAAAACAAACGTTAAAGAAACCATAACAATACCTGAAACCGGGGGCCTTAAAACGGAGACTTATGACTCAAAAGGAATCCGCAACTATAAGCAGGCTTTCTGGGCGGCAAACCGTCGCCACCAGAAGAACATTTTAAAGAAAATTTCGGTGTCGTTTACCGCCACTGAAGAGGGTATTTTCGCCCTTCCGAATCGTGCCGTTAGTGTGGTTAAGGGTTCGCGTATGTCTACTTACGACGGCTACGTAACTGCGGTGAACGGCCTCACCGTAGAGCTTTCGCAGCCAGTTAAGTTCACCTCCGGAGATGACCACTATTTGGTTCTGAAGTTACGTGACGGTGGCGTCCAAAGTGTTCGTGTCGTCCCTGGTGCGCATGACCGACAAGTAATTATGACGTCTGTGCCGCAAGAAGCCATTTACACTGGTAATAGCGCCCTGAAAACTGAATTTTCATTCGGCAACGAAGCAAGGCATAATGCTCAGATGATTCTTGTTTCTACGGTAGACCCTGGCGATGACAGAACAGTCAAAATAACCGGGTTTAACTATGACAAGGATTTCTATAAGTTTGACAACGTGCCTCCTTTCGGTCGTGCGTTCTCCAACGGATTCGATAACGGTTTTAACTAA

Genome Context

Genome Context

Tertiary structure

PDB ID
1f314ae6473bea3325747a8f6c750671c79e9ab75efb212bd7a0cd5af8bb09f2
ColabFold
Source ColabFold
Method ColabFold
Resolution 0,3012
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50