Protein

View in Explore
Genbank accession
YP_010080545.1 [GenBank]
Protein name
tail protein
RBP type
TF
Evidence RBPdetect
Probability 0,81
Protein sequence
MINESTLNFIRFSSGFNNLKKEELEAFAENEIFELNEYNASEEIQRKDFYTLLQSTDGTQGVEQEDGKYIHTAWANSSDGTNGFKTVYPKLNLLDGTKDFSGQWNWADTWTTDGTYEGLTVKKTTKQWGGIHKIFTAPKDGTYTFSAYVKSSGSNANTIRFTLINDSGNSLNRAFTNNFDWFRDSVTVTLKANDQVFSRYEMSGSASGSALWTAGHKWEEGSIATPWMPSASEVTTAEWPLRYIGQYTDYTPEDSINPSSYTWRQIQGKYFYTLEDVNTNGTLKSYIIECLKLSLQTRWGNNLEYHIDRKTKYLNKLTGMQA
Physico‐chemical
properties
protein length:322 AA
molecular weight: 36709,99790 Da
isoelectric point:5,18840
aromaticity:0,13975
hydropathy:-0,69099

Domains

Domains [InterPro]
DC_1885
STR
4–312
DC_1885
IPR008983
RBD
124–218
IPR008983
IPR008983
RBD
131–206
IPR008983
YP_010080545.1
1 322
Architecture
STR
STR 4-312 |
Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Taxonomy

  Name Taxonomy ID Lineage
Phage Lactococcus phage 37203
[NCBI] 		2024335 Viruses > Duplodnaviria > Heunggongvirae > Uroviricota > Caudoviricetes
Host Lactococcus lactis
[NCBI] 		1358 cellular organisms > Bacteria > Bacillati > Bacillota > Bacilli > Lactobacillales

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
YP_010080545.1 [NCBI]
Genbank nucleotide accession
NC_054992 [NCBI]
CDS location
range 821 -> 1789
strand -
CDS
ATGATTAACGAAAGTACATTAAACTTTATCCGTTTCTCTAGCGGTTTCAATAACTTAAAAAAGGAAGAACTTGAAGCCTTTGCCGAAAATGAAATCTTTGAACTTAATGAGTATAACGCAAGTGAGGAAATACAAAGAAAAGATTTCTACACTTTATTACAATCTACTGACGGAACGCAAGGAGTAGAACAGGAGGATGGAAAATATATTCACACAGCATGGGCAAATAGTTCAGACGGCACGAACGGTTTCAAGACTGTTTATCCGAAATTGAACTTATTGGATGGTACTAAAGATTTTAGCGGTCAATGGAATTGGGCAGACACTTGGACAACCGACGGGACTTATGAAGGTCTAACTGTTAAGAAAACAACTAAACAATGGGGTGGTATTCATAAAATATTTACAGCACCAAAAGACGGTACTTATACTTTCTCAGCTTATGTTAAAAGTTCAGGAAGTAATGCAAATACAATTAGATTTACCTTGATTAACGATTCAGGAAATTCTTTAAACAGGGCATTCACTAATAATTTTGATTGGTTTAGAGATAGCGTTACCGTAACCTTAAAAGCTAATGACCAAGTATTTTCTAGATACGAAATGTCAGGTTCAGCCTCTGGTTCAGCTTTATGGACTGCTGGTCATAAGTGGGAAGAGGGTTCAATCGCAACTCCTTGGATGCCCTCAGCTAGTGAAGTCACAACTGCTGAATGGCCACTAAGATATATTGGTCAATATACAGATTACACGCCAGAAGATAGTATAAACCCTAGTTCTTATACTTGGAGACAAATACAAGGAAAATATTTCTACACTTTAGAAGATGTCAACACGAATGGAACTCTTAAAAGTTACATCATTGAATGCTTAAAACTTTCACTTCAAACACGATGGGGGAACAACTTAGAGTACCACATCGACCGAAAAACAAAATACTTGAACAAATTAACAGGAATGCAAGCGTAA

Genome Context

Genome Context

Tertiary structure

PDB ID
d1c7021996a0f9d12a55ec9383ca15af8d7e9ff7e7e316df564861e3d02026f4
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,6555
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50

Literature

Title Authors Date PMID Source
Comparative genome analysis of members of the virulent lactococcal c2 group phages Oliveira,J. 2024 — GenBank