Protein

View in Explore
Genbank accession
WWY65374.1 [GenBank]
Protein name
tail protein
RBP type
TSP
Evidence DepoScope
Probability 1,00
TSP
Evidence RBPdetect
Probability 0,91
TSP
Evidence RBPdetect2
Probability 0,95
Protein sequence
MSTITDMWQRALKASDGNYDTMHTWAGNGNAQRSYELNFTGGYISQSDVKAYMIERNTTNRVDLRVLFVNASTVRLNQAVPVGWDVTIYRDTPKDNPSASFVDGALITARNLDRNAKQAIFGVAEMVDRFLNTQANIDQALNIANDALALAGEAKDIAESAVSSSGSVARTIRAPVGDTLNELPSKELRNGKVVSFDSNGQLLLAAPATGSAADVMIQLRKSNGSSFIGIPYGTGSVDSAMKYLSFEMFGAVSGNTVDQTAAIQATVDAAKLTGLPIWSTGNYHIKGTVTIDFACKLSGFSLNGPANSTSQHLTVRGDVTLEWCKFERVYVYHGDGNLIMTDFQFTGVRYTAAILSEKLSQVGSLDLRSGTFRNCNFGILRQGSPASTQPLRYALMRNLQFYDMQSDCIEMNLGINDQYTLVEGVTIDNVDHLSTQPNWGIAMGFAGSGNYAITDDYTNFYKNLVIRNCRIYSARQCIHLEKCAGAIIQDCEIYPDNTKSVNAGIDPAGIVLYGCADITLKNITGKPLVGDRMIWVAWGVNGGNYNAAGRNISMENINVGGSIDINVSTTNAVRGFLTINGLRCDALSIVGHASEYNLKDIVATSGVIEFHRVNNNGTDNIRRTWRTACTIDNMQFRDANLNPNVTVGRIAADEMTVSNCNFTIRKTASSVTNRGTPVTKLDGIYYLEAAGFPYGYWFRPGDKIQDNTGKLFTITSEGAIFKAAGDTRVRAAAAGSRILQGMGSENWTTVLWKTAGVKIVIPRGGANAADLYTTIMQSAYIGGGIYTFQIADPLGTAISDDTIITPQLVCTYVENS
Physico‐chemical
properties
protein length:816 AA
molecular weight: 88336,48920 Da
isoelectric point:5,87524
aromaticity:0,08578
hydropathy:-0,12169

Domains

Domains [InterPro]
DC_1510
STR
2–411
DC_1510 DC_0045
IPR011050
STR
242–663
IPR011050
IPR023882
RBD
369–561
IPR023882
WWY65374.1
1 816
Architecture
STR
RBD
STR 2-663 | RBD 664-816
Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Tail Spike Domain Segmentation

Tail Spike Domain Segmentation

This protein has been segmented into three structural domains: N-terminal, central domain, and C-terminal.

Domain Layout
N-terminal
Central
C-terminal
WWY65374.1
1 816
Domain Start End Length (AA) Confidence
N-terminal 1 258 258 0,9943
Central domain 259 727 470 0,9869
C-terminal 728 816 88 0,9175
Legend: N-terminal Central domain C-terminal
3D Structure with Domain Coloring

The structure is colored according to the domain segmentation: N-terminal (blue), Central (green), C-terminal (pink).

Domain Coloring
N-terminal
1-258
Central
259-727
C-terminal
728-816

Taxonomy

  Name Taxonomy ID Lineage
Phage Escherichia phage vB_EcoP_LHP
[NCBI] 		3129139 Viruses > Duplodnaviria > Heunggongvirae > Uroviricota > Caudoviricetes
Host Escherichia coli K-12
[NCBI] 		83333 Bacteria > Proteobacteria > Gammaproteobacteria > Enterobacteriales > Enterobacteriaceae > Escherichia

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
WWY65374.1 [NCBI]
Genbank nucleotide accession
PP453689 [NCBI]
CDS location
range 30198 -> 32648
strand +
CDS
GTGAGCACTATTACAGACATGTGGCAACGAGCACTAAAAGCCTCTGATGGCAACTACGACACGATGCACACCTGGGCTGGTAATGGGAATGCTCAACGGTCATACGAACTTAACTTCACTGGTGGTTATATTAGCCAATCAGACGTTAAGGCGTACATGATTGAGCGCAACACTACCAACCGGGTTGACCTTCGTGTCCTCTTCGTCAACGCCAGCACGGTACGCCTGAACCAGGCTGTTCCTGTAGGCTGGGACGTAACCATTTACCGCGACACCCCAAAGGATAACCCTTCGGCTTCCTTCGTGGATGGCGCACTTATTACCGCACGTAACCTTGACCGTAACGCGAAGCAAGCAATCTTCGGCGTAGCGGAAATGGTTGACCGCTTCCTGAACACCCAGGCAAACATCGACCAGGCGCTTAACATCGCCAACGATGCACTGGCCCTGGCAGGTGAAGCGAAAGACATTGCTGAATCGGCAGTAAGCTCTTCTGGTTCAGTGGCACGTACTATCCGTGCTCCGGTTGGCGACACCCTGAACGAACTCCCGTCTAAGGAGCTGCGTAACGGTAAGGTCGTTAGCTTTGATTCAAACGGTCAGCTCCTGCTGGCTGCTCCGGCCACTGGCTCTGCTGCTGACGTAATGATTCAGCTCCGCAAGTCCAATGGCTCCAGCTTCATCGGTATCCCATACGGCACTGGCTCTGTGGATTCTGCGATGAAGTATCTGAGCTTCGAAATGTTTGGCGCTGTCTCCGGTAACACGGTAGACCAGACCGCTGCTATCCAGGCAACGGTTGACGCAGCCAAACTGACGGGACTCCCTATCTGGTCTACTGGCAACTACCACATCAAAGGTACGGTGACTATCGACTTCGCCTGTAAGCTCTCTGGTTTCTCCCTGAATGGCCCCGCTAACTCTACGAGTCAGCACCTGACTGTTCGTGGCGATGTTACCCTGGAGTGGTGTAAGTTCGAACGTGTCTACGTTTACCACGGTGACGGTAACCTGATTATGACTGACTTCCAGTTCACTGGTGTTCGCTACACTGCGGCCATCCTGTCTGAGAAGCTGTCCCAGGTTGGTTCCCTTGACCTGCGTAGCGGTACGTTCCGCAACTGTAACTTCGGCATCCTTCGCCAGGGTTCTCCGGCATCCACCCAGCCTCTGCGCTATGCACTGATGCGTAACCTCCAGTTCTACGATATGCAGTCTGACTGTATCGAAATGAACCTGGGGATTAACGACCAGTACACGCTGGTTGAGGGTGTGACCATCGACAACGTTGACCACCTTAGCACTCAGCCCAATTGGGGTATCGCTATGGGCTTCGCTGGCTCTGGTAACTATGCCATCACTGATGACTACACCAACTTCTACAAGAACCTGGTGATTCGTAACTGCCGTATCTACTCGGCACGTCAGTGTATCCACCTTGAGAAGTGTGCGGGTGCTATTATCCAGGACTGTGAGATTTACCCGGATAATACCAAGTCTGTTAACGCTGGGATTGACCCGGCAGGTATTGTGCTGTATGGTTGTGCTGATATCACGCTGAAGAACATCACTGGTAAGCCGCTGGTCGGTGACCGTATGATTTGGGTAGCGTGGGGTGTCAACGGCGGTAACTACAACGCCGCTGGCCGTAACATCAGCATGGAGAACATTAACGTTGGTGGTTCCATCGACATTAACGTATCCACTACGAATGCCGTGCGCGGCTTCCTTACCATTAACGGTCTTCGCTGTGATGCCCTGTCCATCGTCGGTCACGCCTCTGAGTACAACCTAAAGGATATCGTGGCAACGTCTGGTGTGATTGAGTTCCACCGCGTGAACAATAACGGTACGGATAACATTCGTCGAACCTGGCGTACTGCCTGCACCATCGACAACATGCAATTCCGTGACGCAAACCTGAACCCTAACGTTACCGTTGGCCGTATCGCGGCTGATGAAATGACGGTTTCTAACTGCAACTTCACCATTCGCAAGACTGCCAGCTCGGTTACTAACCGTGGCACTCCTGTGACTAAACTGGATGGTATCTACTACCTGGAGGCCGCTGGCTTCCCATACGGGTACTGGTTCCGACCTGGTGATAAGATTCAGGATAATACGGGCAAGCTCTTTACCATCACCTCTGAGGGCGCTATCTTCAAGGCCGCTGGTGATACCCGAGTGCGTGCCGCTGCCGCTGGTAGCCGCATCCTCCAGGGTATGGGTTCCGAGAACTGGACTACGGTTCTTTGGAAGACAGCAGGCGTTAAGATTGTCATCCCACGGGGCGGTGCTAACGCAGCCGACCTGTACACCACCATCATGCAATCTGCATACATCGGTGGCGGTATCTACACGTTCCAGATTGCTGACCCGCTGGGTACAGCTATCAGTGATGATACCATCATTACCCCGCAGCTTGTCTGCACCTACGTTGAGAACAGTTAA

Genome Context

Genome Context

Tertiary structure

PDB ID
0dbc4bcf93921577991598efb8ad2ac27361bf70bef699436049244e2fe9fab5
ColabFold
Source ColabFold
Method ColabFold
Resolution 0,3264
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50

Literature

Title Authors Date PMID Source
Isolation and identification of phages and their application in the control of antibiotic resistant bacteria Wang,Y.-Z., Ye,M., Hu,S.-L., Jin,M.-K., Fortuna,K.J., Lavigine,R. and Su,J.-Q. 2024 — GenBank