Protein

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UniProt accession
S5VZR0 [UniProt]
Protein name
Putative phage tail fiber protein
RBP type
TF
Evidence RBPdetect
Probability 0,90
TF
Evidence RBPdetect2
Probability 0,89
Protein sequence
MIFAPGEASQTEVVVEDDHLKAAEPVESDISEIESGFYDWQLGILTLAMYNGTVIKISGFATAGNIPAGPTGPQGLPGKDGKDGRDGKDGAKGPEGCQGPQGPQGAQGATGPDGRDGQMGQQGPRGCPGPKGPPGERGPTGPMGPLGPTGPRGEQGAQGAPGAPGPAGTVNIIVSTTDPGAVGAGWLWVNPGATGAPSGGSGGGGSTTPTDPPIGTPWP
Physico‐chemical
properties
protein length:219 AA
molecular weight: 21288,15120 Da
isoelectric point:4,40738
aromaticity:0,04110
hydropathy:-0,53151

Domains

Domains [InterPro]
DC_1842
ATT
1–67
DC_1842 IPR050149
IPR008160
STR
111–168
IPR008160
S5VZR0
1 219
Architecture
ATT
STR
ATT 1-67 | STR 111-168 |
Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Taxonomy

  Name Taxonomy ID Lineage
Phage Pseudomonas phage PaBG
[NCBI] 		1335230 Uroviricota > Caudoviricetes > Baikalvirus >
Host Pseudomonas aeruginosa PAO1
[NCBI] 		208964 Bacteria > Proteobacteria > Gammaproteobacteria > Pseudomonadales > Pseudomonadaceae > Pseudomonas

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
AGS82120.1 [NCBI]
Genbank nucleotide accession
KF147891 [NCBI]
CDS location
range 198068 -> 198727
strand +
CDS
ATGATCTTCGCCCCAGGCGAGGCCTCACAGACTGAGGTAGTAGTCGAAGACGATCACCTAAAAGCGGCGGAGCCTGTTGAGTCTGACATCAGTGAAATCGAGAGCGGGTTCTACGACTGGCAACTCGGCATCCTGACACTCGCCATGTACAACGGAACCGTCATCAAGATCAGCGGTTTCGCCACTGCCGGTAACATCCCTGCGGGCCCTACAGGTCCGCAAGGTCTGCCTGGTAAAGATGGTAAAGATGGACGTGATGGCAAAGACGGTGCCAAGGGTCCAGAGGGTTGCCAAGGCCCACAGGGTCCACAGGGTGCTCAAGGTGCTACAGGTCCTGATGGTCGTGATGGGCAGATGGGCCAACAAGGTCCCCGCGGCTGTCCTGGCCCAAAAGGCCCTCCTGGCGAACGTGGACCAACTGGTCCTATGGGTCCATTGGGTCCGACCGGTCCTAGAGGAGAACAAGGTGCGCAAGGTGCTCCCGGCGCTCCTGGTCCTGCGGGCACAGTGAACATCATCGTCTCTACTACTGATCCTGGTGCAGTTGGCGCCGGTTGGCTGTGGGTTAATCCAGGTGCGACAGGTGCCCCGAGCGGTGGTTCTGGTGGCGGCGGTTCTACTACGCCTACTGACCCTCCGATTGGGACGCCATGGCCTTAA

Genome Context

Genome Context

Gene Ontology

Description Category Evidence (source)
GO:0031012 extracellular matrix Cellular Component IEA:TreeGrafter (UniProt)
GO:0005615 extracellular space Cellular Component IEA:TreeGrafter (UniProt)
GO:0030020 extracellular matrix structural constituent conferring tensile strength Molecular Function IEA:TreeGrafter (UniProt)
GO:0030198 extracellular matrix organization Biological Process IEA:TreeGrafter (UniProt)

Tertiary structure

PDB ID
38832cdf2632b95e54b3146b4c31950a11e558a95a7d914442578b37a116a7e6
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,7226
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50