Protein

View in Explore
Genbank accession
XNY56598.1 [GenBank]
Protein name
non-contractile tail fiber protein
RBP type
TF
Evidence GenBank
Probability 1,00
TSP
Evidence DepoScope
Probability 1,00
TSP
Evidence RBPdetect
Probability 0,91
TSP
Evidence RBPdetect2
Probability 0,95
Protein sequence
MAYSWQEQVKPAGTQDIQCDIEYLDKSYIHVYLDGVETTEYTWTSSTNIRLNFPLPAEAVVLLIRKTEREYLYIEFASGSPFIEVNVDSQNTQFLHLAQELVEGRAIPGFYGDISMNGYRITNLADPSQAQDAVTKGYADNLYQDAISRSDNNFNRTLRVPESGVGMVPAAAGRKNKILAFNDAGNPVAVLPESGSAADVMIELASKELPGTSLVIGSDGASLDQSIKFITPLLKPGIENAVYNYTILQEAANKNKHLELPKGEFYVSQAFQAGKGQIIKGQGNPHFSPNCYTRLICMTEGGGCIWYTQDTSTGQVRMPQIYHMGLTGDYPVRFNNEQTAIVKDDTSLSNVPFGMVPVVSHCSIDPRVNGTGIAISWSKMFDGVIEFCEIANFNIGLLLNGCDLNYVAHNRIRNAWRYMILELSASTFGSQNEICHNDILHVGSPNCIMIKTTARHARIYDNYLEQATGADGQALIGFIDATDVDAPSYAGNVSEGRYSTIIRDNRIDGFSKAKYFVYKYQPKGQTYGEIVDVSTVGSNVGLGSNALTLVDETGVTVDSVPLLYNQLQPCSFVFKGPRFGKWNGYTSEGQFSDVINGRNVGAFGSSLYGNNMSDYLRARGNEIVLMAGFASVGIFSYAASTGMFEPGKSYIIEVEAYCASGTESLTFSGVVAGAGKTASTLTLSTAPKKMRVEFTSGVSGSSNGIMFSRSNNGSDIIIKSIRFLRKYLQENTMSASTSKTLQITSPSGEIHISANGGNQFPAYKILKFINGALVEIFSQASSSAVIDTSWSYSSGTLTVDVTGTGGSKQLALSQINQPV
Physico‐chemical
properties
protein length:819 AA
molecular weight: 88867,90100 Da
isoelectric point:5,35448
aromaticity:0,09768
hydropathy:-0,14408

Domains

Domains [InterPro]
DC_1609
STR
1–219
DC_1609 IPR011050 DC_0556
IPR005604
ATT
12–103
IPR005604
XNY56598.1
1 819
Architecture
STR
ATT
STR
STR
RBD
STR 1-11 | ATT 12-103 | STR 104-219 | STR 251-550 | RBD 561-819
Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Tail Spike Domain Segmentation

Tail Spike Domain Segmentation

This protein has been segmented into three structural domains: N-terminal, central domain, and C-terminal.

Domain Layout
N-terminal
Central
C-terminal
XNY56598.1
1 819
Domain Start End Length (AA) Confidence
N-terminal 1 241 241 0,9947
Central domain 242 587 347 0,9863
C-terminal 588 819 231 0,9675
Legend: N-terminal Central domain C-terminal
3D Structure with Domain Coloring

The structure is colored according to the domain segmentation: N-terminal (blue), Central (green), C-terminal (pink).

Domain Coloring
N-terminal
1-241
Central
242-587
C-terminal
588-819

Taxonomy

  Name Taxonomy ID Lineage
Phage Klebsiella phage vB_KpP_JKT5
[NCBI] 		3386302 Viruses > Duplodnaviria > Heunggongvirae > Uroviricota > Caudoviricetes
Host Klebsiella pneumoniae
[NCBI] 		573 cellular organisms > Bacteria > Pseudomonadati > Pseudomonadota > Gammaproteobacteria > Enterobacterales

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
XNY56598.1 [NCBI]
Genbank nucleotide accession
PQ735929.1 [NCBI]
CDS location
range 36591 -> 39050
strand +
CDS
ATGGCATACAGCTGGCAAGAGCAAGTTAAGCCTGCAGGTACACAGGATATCCAGTGCGATATTGAATATCTGGATAAGTCCTATATTCACGTATATCTCGACGGCGTTGAGACCACTGAATACACTTGGACTAGCTCTACTAATATTCGTCTGAATTTCCCACTGCCTGCAGAGGCAGTGGTTCTCCTAATTCGTAAGACTGAGCGCGAATATCTGTACATTGAGTTTGCTAGCGGCTCTCCGTTCATCGAGGTGAACGTAGACTCTCAGAACACGCAGTTCTTGCACCTGGCGCAAGAACTGGTAGAGGGGCGCGCCATCCCAGGATTCTACGGCGATATCAGCATGAACGGGTACCGCATCACTAACTTAGCGGACCCGTCACAGGCACAGGATGCGGTGACAAAGGGGTATGCTGACAATCTCTATCAGGACGCCATCTCTCGTTCAGACAATAACTTTAATCGGACGCTGAGGGTTCCTGAATCAGGAGTAGGGATGGTGCCAGCTGCGGCAGGGCGTAAAAATAAAATCCTGGCATTCAACGATGCCGGTAATCCGGTAGCGGTATTGCCAGAGTCCGGGTCAGCGGCGGATGTGATGATTGAACTGGCTTCAAAAGAACTTCCCGGAACGTCATTAGTAATTGGCTCTGACGGAGCAAGCCTTGATCAGTCTATTAAGTTTATTACACCACTCCTAAAGCCGGGCATTGAAAATGCAGTATACAACTACACGATACTGCAGGAGGCAGCAAACAAGAACAAACACCTCGAATTACCAAAAGGTGAGTTCTATGTTTCCCAAGCTTTTCAGGCTGGGAAAGGTCAGATAATCAAAGGCCAAGGGAATCCACACTTTTCCCCGAATTGCTATACACGCCTCATTTGTATGACTGAGGGTGGGGGATGCATCTGGTATACCCAGGATACTTCCACTGGTCAGGTTCGTATGCCGCAGATTTATCATATGGGGCTTACCGGCGATTATCCTGTCCGGTTTAATAACGAACAAACAGCAATCGTCAAGGATGATACCTCACTCTCCAATGTCCCTTTTGGTATGGTTCCAGTTGTAAGTCACTGCTCTATAGATCCAAGGGTCAATGGCACAGGGATTGCTATATCCTGGTCAAAAATGTTTGATGGGGTCATTGAGTTTTGTGAAATAGCAAACTTTAATATCGGTCTGCTGTTGAATGGGTGTGACCTGAACTATGTAGCTCATAACCGTATCCGTAATGCCTGGAGATATATGATTCTGGAACTGAGTGCCAGCACCTTCGGTTCACAGAATGAAATATGCCACAACGATATTCTGCACGTTGGCTCGCCAAACTGTATCATGATTAAGACTACAGCCCGCCACGCTCGTATTTATGATAACTACCTGGAGCAGGCTACGGGGGCAGATGGGCAGGCGCTCATAGGGTTTATTGATGCGACAGATGTGGATGCTCCATCCTACGCGGGTAATGTATCAGAGGGTCGTTACTCGACTATTATTAGAGATAACCGAATCGATGGTTTTTCAAAGGCTAAATATTTTGTTTACAAATATCAGCCAAAAGGCCAGACATACGGAGAAATCGTTGATGTCTCAACGGTGGGCTCTAATGTTGGTTTGGGATCAAATGCCCTGACATTGGTTGATGAGACTGGTGTGACGGTTGACAGTGTTCCTTTGTTGTATAATCAGCTGCAGCCGTGCTCGTTCGTCTTTAAGGGGCCGCGCTTTGGTAAATGGAACGGATACACCTCAGAGGGACAGTTTTCTGACGTTATCAATGGACGCAATGTAGGTGCATTCGGCTCATCCTTGTACGGCAACAATATGTCCGATTATCTGCGTGCTCGTGGTAATGAGATAGTGCTGATGGCAGGCTTCGCCAGTGTTGGTATTTTTAGCTATGCTGCCTCGACTGGCATGTTTGAGCCAGGGAAGTCTTACATTATTGAGGTGGAGGCATACTGCGCCAGCGGTACAGAAAGCCTCACATTCAGCGGAGTTGTTGCTGGGGCGGGTAAAACCGCATCAACCCTTACTCTATCAACGGCCCCTAAAAAGATGAGGGTGGAATTTACCTCTGGGGTTTCTGGTTCCTCTAATGGTATTATGTTCTCACGTTCAAATAATGGCTCGGACATCATAATTAAGAGCATTCGCTTCCTGAGAAAGTATCTCCAGGAAAATACCATGTCCGCAAGCACGTCCAAAACCTTGCAGATAACGTCCCCGTCTGGTGAGATCCACATTTCCGCTAATGGGGGAAACCAGTTCCCGGCTTACAAGATATTGAAGTTTATTAATGGGGCATTAGTCGAGATCTTTTCTCAGGCATCAAGTTCCGCAGTTATTGATACTTCGTGGTCGTATTCATCGGGGACTTTGACTGTTGATGTCACCGGCACAGGCGGCTCTAAACAACTTGCGCTTAGCCAAATTAACCAACCAGTATAA

Genome Context

Genome Context

Tertiary structure

PDB ID
d606d6eedbcbc60ca84eee13ff86bb01246d53fd22756cff8897e7d4d3b6aded
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,6684
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50

Literature

Title Authors Date PMID Source
Morphological and genomic characterization of specific ESBL-producing Klebsiella pneumoniae podoviruses Saharman,Y.R., Safitri,N.A., Pramono,A.K., Safari,D., Saptawati,L., Anggraini,D., Sarassari,R. and Mardiana,M. 2025-12-01 — GenBank