Protein

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Genbank accession
QVW28398.1 [GenBank]
Protein name
hinge connector of long tail fiber distal connector
RBP type
TSP
Evidence RBPdetect
Probability 0,90
Protein sequence
MADLKLGSTAGGSVIWHQGNFPLTPVSNDLFYKTYKVYTEFNKPQAADNDFVSKADGGNYLGTVNFDKDLQFKDSDGYWVKLGRKTNTSPMSSTYSFSFRMSKGMGLETSDGTPFVIFDPTTVVGANRLTVMGDILGRQIKDESGRVFSPGNTPTKAQVGLSDVDNAKQVQINNSNIQSMAGVLSAPNFISRNPGTLNEHVPRMDQVVLRGTSEDFGYY
Physico‐chemical
properties
protein length:219 AA
molecular weight: 23953,47110 Da
isoelectric point:6,10550
aromaticity:0,10502
hydropathy:-0,43881

Domains

Domains [InterPro]

No domain annotations available.

Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Tail Spike Domain Segmentation

Tail Spike Domain Segmentation

This protein has been segmented into three structural domains: N-terminal, central domain, and C-terminal.

Domain Layout
N-terminal
Central
C-terminal
QVW28398.1
1 219
Domain Start End Length (AA) Confidence
N-terminal 1 201 201 0,3850
Central domain 202 208 8 0,5608
C-terminal 209 219 10 0,8120
Legend: N-terminal Central domain C-terminal
3D Structure with Domain Coloring

The structure is colored according to the domain segmentation: N-terminal (blue), Central (green), C-terminal (pink).

Domain Coloring
N-terminal
1-201
Central
202-208
C-terminal
209-219

Taxonomy

  Name Taxonomy ID Lineage
Phage Escherichia phage C6
[NCBI] 		2831681 Viruses > Duplodnaviria > Heunggongvirae > Uroviricota > Caudoviricetes
Host Escherichia coli
[NCBI] 		562 cellular organisms > Bacteria > Pseudomonadati > Pseudomonadota > Gammaproteobacteria > Enterobacterales

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
QVW28398.1 [NCBI]
Genbank nucleotide accession
MW679410 [NCBI]
CDS location
range 155920 -> 156579
strand +
CDS
ATGGCTGATTTAAAATTAGGCTCAACTGCTGGAGGTTCCGTTATATGGCACCAAGGTAACTTTCCGTTGACGCCCGTAAGCAATGATTTATTTTACAAAACATATAAAGTATATACAGAATTTAATAAGCCTCAAGCCGCTGATAACGACTTTGTTTCTAAAGCCGATGGTGGGAATTATTTAGGTACAGTAAACTTTGATAAAGACTTGCAATTTAAAGATTCTGATGGATACTGGGTTAAATTAGGTAGAAAAACCAATACATCCCCAATGTCATCCACGTATTCTTTCTCATTTAGAATGAGCAAAGGTATGGGTCTTGAGACATCGGATGGTACACCATTTGTAATTTTCGACCCGACTACTGTTGTAGGTGCAAACCGACTTACTGTAATGGGTGATATCCTTGGTCGTCAAATTAAAGACGAATCAGGTCGAGTGTTTTCTCCAGGGAATACTCCGACAAAAGCCCAAGTTGGATTAAGCGATGTAGATAACGCAAAACAGGTCCAAATAAATAATAGTAACATACAATCTATGGCTGGTGTTCTTTCAGCCCCGAATTTCATATCTAGGAACCCAGGTACATTGAACGAACACGTTCCTCGTATGGACCAGGTTGTTCTTAGAGGTACATCTGAAGATTTTGGATATTATTAA

Genome Context

Genome Context

Tertiary structure

PDB ID
35b44a74c979334334f886cf34a68946cee257a416ecbbe072a5e63217df1d81
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,6329
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50

Literature

Title Authors Date PMID Source
Biological properties of an Escherichia lytic phage infecting 4 pathogenic Escherichia coli strains Lin,Y. and Zhu,W. 2019-04-18 — GenBank