Protein

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Genbank accession
BAW19330.1 [GenBank]
Protein name
putative virion structural protein
RBP type
TSP
Evidence DepoScope
Probability 1,00
Protein sequence
MYQLVSAIAQLMAAGTAWAEVDLSTLTLSQIDSAYSDVYLRVSNPFWTSDRTMRFGEITSGYVQRDQTLAQFFAAQGNNTLPSTNGIASIAKGSIKYADAYWAGYQLERGRYLQSPTTIPQPDEADCLIMSKPGVDARVFHKNCLVSINGLIHRVDADSQYIYVIDAGKSNYLSRRNEVGIINFQDIGELTCVTITADMLFRAHSDQPFSNQIFIKSPVEAQGKTVALVMGGYLFLLDGLSFFRTADDIFCLDTQSVPLLDRFYESRALIDMSNLGLEYNGAHDAQISRDQLYSDAVLTNWLTMSQSFLVLIDSPKVVVERQQLAPTQIAKQYLAFDEPSLPLVGGFGLLWPYWVQEDDGVFSVTVGDNIYHHRLFHTTPASQATMPADNRIPYNRESYSYAHFLDVQSEKVVITPNT
Physico‐chemical
properties
protein length:418 AA
molecular weight: 46716,13680 Da
isoelectric point:4,83270
aromaticity:0,11244
hydropathy:-0,09211

Domains

Domains [InterPro]

No domain annotations available.

Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Tail Spike Domain Segmentation

Tail Spike Domain Segmentation

This protein has been segmented into three structural domains: N-terminal, central domain, and C-terminal.

Domain Layout
N-terminal
Central
C-terminal
BAW19330.1
1 418
Domain Start End Length (AA) Confidence
N-terminal 1 195 195 0,0409
Central domain 196 394 200 0,0667
C-terminal 395 418 23 0,9802
Legend: N-terminal Central domain C-terminal
3D Structure with Domain Coloring

The structure is colored according to the domain segmentation: N-terminal (blue), Central (green), C-terminal (pink).

Domain Coloring
N-terminal
1-195
Central
196-394
C-terminal
395-418

Taxonomy

  Name Taxonomy ID Lineage
Phage Ralstonia phage RP31
[NCBI] 		1923890 Viruses > Duplodnaviria > Heunggongvirae > Uroviricota > Caudoviricetes
Host Ralstonia solanacearum
[NCBI] 		305 cellular organisms > Bacteria > Pseudomonadati > Pseudomonadota > Betaproteobacteria > Burkholderiales

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
BAW19330.1 [NCBI]
Genbank nucleotide accession
AP017925 [NCBI]
CDS location
range 74709 -> 75965
strand -
CDS
ATGTATCAACTGGTCTCTGCAATTGCACAACTCATGGCCGCCGGGACAGCTTGGGCTGAGGTGGATCTGAGCACTTTGACGCTGTCTCAAATCGACAGCGCGTATTCGGATGTTTACCTGCGCGTCAGCAATCCATTCTGGACTAGCGATCGTACGATGCGCTTTGGTGAGATCACCAGCGGCTACGTACAGCGCGACCAGACACTGGCACAGTTCTTTGCCGCACAAGGCAATAACACGCTGCCGTCGACTAACGGCATTGCCTCGATCGCTAAAGGCAGCATCAAGTATGCTGACGCCTACTGGGCAGGTTATCAGCTGGAGCGCGGTCGTTATCTGCAAAGTCCGACTACGATTCCCCAGCCTGATGAGGCAGATTGTCTCATCATGTCGAAGCCCGGTGTTGATGCCCGGGTTTTCCATAAGAATTGCTTGGTCTCGATCAACGGTCTGATCCACCGTGTCGATGCTGACAGCCAGTACATCTACGTAATCGATGCTGGTAAGAGCAATTATCTCAGCCGTCGTAATGAAGTCGGCATCATCAACTTCCAAGACATTGGCGAGTTGACCTGTGTGACGATTACTGCCGATATGCTGTTCCGCGCTCATTCCGATCAGCCGTTCTCTAATCAGATCTTTATCAAGAGTCCAGTTGAGGCTCAGGGTAAGACTGTGGCGTTGGTGATGGGTGGTTATCTGTTCTTGCTGGATGGCTTGAGCTTCTTCCGCACTGCGGATGACATTTTCTGTCTGGACACTCAGTCCGTGCCACTGTTGGATCGTTTCTACGAATCCCGCGCACTGATCGACATGTCGAATCTGGGATTGGAGTACAACGGTGCTCACGATGCTCAGATCTCTCGCGATCAGCTCTACAGTGATGCCGTGTTGACCAACTGGTTGACAATGTCTCAAAGTTTCTTGGTTCTCATCGATAGCCCCAAAGTGGTCGTTGAGCGTCAACAACTGGCGCCTACCCAAATTGCCAAACAGTATCTGGCTTTTGACGAACCGTCTCTACCGCTCGTCGGTGGTTTCGGTCTGCTGTGGCCGTACTGGGTACAGGAAGACGATGGCGTCTTTTCGGTGACTGTAGGTGACAACATCTACCATCACCGGCTATTCCACACTACACCGGCAAGTCAGGCTACGATGCCTGCCGACAACCGCATCCCGTATAACCGAGAATCGTACAGCTACGCCCACTTCCTGGATGTGCAGTCCGAAAAGGTTGTGATCACTCCCAACACCTAA

Genome Context

Genome Context

Tertiary structure

PDB ID
f8118191d0e189a94ebf233a8083c63600fe5dcc5b6aae3f7aca3e8208442385
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,2621
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50

Literature

Title Authors Date PMID Source
Characterization of two jumbo phages RP12 and RP31 infecting the phytopathogen Ralstonia solanacearum Kawasaki,T., Yoshikawa,G., Ogata,H. and Yamada,T. 2020 — GenBank