Protein

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Genbank accession
XLQ31250.1 [GenBank]
Protein name
hypothetical protein
RBP type
TSP
Evidence RBPdetect
Probability 0,78
TF
Evidence RBPdetect2
Probability 0,94
Protein sequence
MADLKAGSTVGGNPIWHAGTFPLVPAGNSLTYRGKKVYTEIDKPQANDNDFVSKSRGGTYTGEIKIAYGAAGKLSMGPLADVGIRAGGSNGEVLIIGGNSTIQLRGGGTEDSSGIVEIAKNGNLTAQTGRITANVFTSKQQPSGVDDLTRKDYVDGLINTVSNVANAAVKKAGDTMTGVLRANAGVVIVNKATSGEYAPRLDQVISRGVTIDFGTY
Physico‐chemical
properties
protein length:216 AA
molecular weight: 22251,68750 Da
isoelectric point:9,04577
aromaticity:0,05556
hydropathy:-0,19352

Domains

Domains [InterPro]

No domain annotations available.

Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Tail Spike Domain Segmentation

Tail Spike Domain Segmentation

This protein has been segmented into three structural domains: N-terminal, central domain, and C-terminal.

Domain Layout
N-terminal
Central
C-terminal
XLQ31250.1
1 216
Domain Start End Length (AA) Confidence
N-terminal 1 191 191 0,2972
Central domain 192 205 15 0,0201
C-terminal 206 216 10 0,9154
Legend: N-terminal Central domain C-terminal
3D Structure with Domain Coloring

The structure is colored according to the domain segmentation: N-terminal (blue), Central (green), C-terminal (pink).

Domain Coloring
N-terminal
1-191
Central
192-205
C-terminal
206-216

Taxonomy

  Name Taxonomy ID Lineage
Phage Raoultella phage Ra_O-1
[NCBI] 		3384769 No lineage information
Host Raoultella ornithinolytica
[NCBI] 		54291 cellular organisms > Bacteria > Pseudomonadati > Pseudomonadota > Gammaproteobacteria > Enterobacterales

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
XLQ31250.1 [NCBI]
Genbank nucleotide accession
PQ564427 [NCBI]
CDS location
range 45182 -> 45832
strand -
CDS
ATGGCCGATTTAAAAGCAGGTTCAACAGTTGGTGGAAATCCTATTTGGCACGCAGGTACTTTTCCTCTTGTGCCGGCAGGAAACTCCCTAACTTATAGAGGTAAAAAGGTTTATACTGAGATAGATAAACCTCAAGCAAATGATAACGACTTCGTATCAAAATCCCGTGGCGGCACATACACTGGCGAAATAAAAATAGCATACGGCGCTGCTGGTAAATTAAGTATGGGGCCACTTGCAGACGTCGGTATTAGAGCTGGTGGTAGTAATGGTGAAGTTCTTATCATCGGAGGGAATTCAACAATTCAATTGCGCGGCGGCGGAACGGAAGATTCCAGCGGCATAGTTGAAATTGCTAAAAATGGTAACTTAACTGCACAGACTGGTAGAATTACCGCTAACGTATTTACTTCTAAACAACAACCATCTGGCGTAGACGATTTAACTCGTAAAGATTATGTTGATGGGCTAATAAATACTGTTAGCAACGTAGCTAACGCAGCAGTCAAGAAAGCTGGTGATACCATGACCGGCGTACTTAGGGCTAACGCTGGCGTAGTTATAGTAAACAAAGCAACATCCGGTGAATATGCTCCTAGATTAGATCAGGTTATTTCACGCGGGGTAACAATAGATTTTGGCACATACTAA

Genome Context

Genome Context

Tertiary structure

PDB ID
65590ece0ef809a8d918cf5d810ef1e30a524d006eeb1b46df944b0a6f68ce5f
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,7892
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50