Protein

View in Explore

Genbank accession

CAH0447827.1 [GenBank]

Protein name

hypothetical protein

RBP type

TSP

Evidence DepoScope

Probability 1,00

TSP

Evidence RBPdetect

Probability 0,88

Protein sequence

MSTFVRLFKYDGDGDVELNYGIIPTSINADPERVISRYSPTTDYPANSFIVRDGDVYHSPHGSAPGPFNSAEWNNVEGLFALVQTFDTDAAYDADSVMLHPRDDAPYYAEAATGPGSLDGDAWVPFTETDAAVTLHCYLDPDSDTELPTVIAGKCVEIKDISLQESDYLDYFAGFYDATNSSEMAVNADGTGTVTNGSIVRWIRDLTGKGNHGIQTDDTLCPRFVAKPGGGGYLRFDPGGHFKVPTITTPTDHWLSCAGRGEAVFLGIDNDRDESNPGATLGMKNHTDTKAWIWSGEAIATERVIQEHEDYVLEDLKELTAKAEGDVSPLGGCFENESRLYRVIPGFNTLGQTMAQTFKNCTIFTGGVSGWDVRFITSLIETFYGCANFNESIGNWQTNNLQLLTSTFQGAFKFNQDLSAWDVSKVRTFDYCFADTTAYNNGGVNLLNWTTPAAESMTGMFLNAQSFNQELGYWDTSSVTSMESMFDGAETFNQDIGSWDVSLVANMDRMFYGTTDFNQDISWWCADSIPTEPTDFDTDSGFVDQAALQPNWGGCLPTGFIAIYEYDDPATMGAATTGVGGVTDGTKVAYVTDITGNDNHAIQADPLLQPTFREVADGKGYLEFTNDQHLVCAAITNPTHCASAHEGRGTVRHATMDNTAGMKVGINFAAADKKWELASQSFAETTVLQDDWDFEFDRRGAVAKQNAIPAGSQVKSMFEDEQYVTDGVAALTLPDLTDMTAMMKGCFRWNEDIDAWDVSSCTDMTSAFEGCVAFNGTCSSWNVSSVVSFNSMFKTAALFNQDITSWVTSSATDMSGMFMFAGSFTQDLSGWNTEFVTDMSQMFERSSVNFDLSALDTAAVVNFNRMFADSNFFNQDINAVDFSAAEDMGGMFYGAKAFNNGGQALAINAPVATTLNQFLSFSDVFNQDISAMNLPAVETLGGFLSGAQSFNNIIAGFSAPVATDVNSFFAYAPGFNQDISEMVLPNVTGVSAFVRGCPLYDNGGMAVTHDPAKFNFANVVSLDNFFEDCPVFNQDVSTMAAGTLTRTNATFKNCAAFNQDVSSWNMSNVIITEDMFSGCTNFDGDLTLWSLDSLENANYMFLDAVSFTGTGVGGWSFGALITAEEMFRGCTVVGDVFSAWDFTGVSSTDAFTDAPLVVSFPIGYV

Physico‐chemical properties

protein length:	1165 AA
molecular weight:	126522,19060 Da
isoelectric point:	4,07515
aromaticity:	0,12275
hydropathy:	-0,13725

Domains

Domains [InterPro]

DC_1912
STR
20–224

DC_1912 DC_1384 IPR005046 DC_0103 DC_1384 IPR005046

IPR005046
STR
353–441

IPR005046 IPR005046 DC_0103 DC_1935

DC_1384
RBD
440–609

DC_1384 IPR011889 IPR005046

CAH0447827.1

1 1165

Architecture

STR

RBD

STR

RBD

STR

RBD

STR

STR 20-224 | RBD 283-352 | STR 353-529 | RBD 530-713 | STR 714-831 | RBD 832-912 | STR 913-1158 |

Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Domains [InterPro]

Domain ID	Category	Cluster	Start	End	Layer	Name	Pref Zone	Confidence	Evidence	Support
DC_1912	STR	DC_1912	20	224	Novel HMM	DC_1912	Central	Low	Positional only	7 proteins / 7 hits
DC_1384	RBD	DC_1384	283	446	Novel HMM	DC_1384	C-terminal	Low	Positional only	20 proteins / 20 hits
IPR005046	STR	DC_0253	353	441	InterPro cluster	Protein of unknown function DUF285	Central	Low	Positional only	37 proteins / 182 hits
DC_1384	RBD	DC_1384	440	609	Novel HMM	DC_1384	C-terminal	Low	Positional only	20 proteins / 20 hits
IPR005046	STR	DC_0253	446	529	InterPro cluster	Protein of unknown function DUF285	Central	Low	Positional only	37 proteins / 182 hits
DC_0103	RBD	DC_0103	591	850	Novel HMM	DC_0103	C-terminal	Low	Positional only	30 proteins / 30 hits
IPR005046	STR	DC_0253	714	831	InterPro cluster	Protein of unknown function DUF285	Central	Low	Positional only	37 proteins / 182 hits
IPR011889	Unmapped	-	817	840	InterPro	Bacterial surface protein 26-residue repeat	-	-	-	-
DC_0103	RBD	DC_0103	836	920	Novel HMM	DC_0103	C-terminal	Low	Positional only	30 proteins / 30 hits
DC_1384	RBD	DC_1384	902	1002	Novel HMM	DC_1384	C-terminal	Low	Positional only	20 proteins / 20 hits
IPR005046	STR	DC_0253	913	996	InterPro cluster	Protein of unknown function DUF285	Central	Low	Positional only	37 proteins / 182 hits
DC_1935	STR	DC_1935	996	1158	Novel HMM	DC_1935	Central	Low	Positional only	24 proteins / 24 hits
IPR005046	STR	DC_0253	1010	1110	InterPro cluster	Protein of unknown function DUF285	Central	Low	Positional only	37 proteins / 182 hits

Tail Spike Domain Segmentation

This protein has been segmented into three structural domains: N-terminal, central domain, and C-terminal.

Domain Layout

N-terminal

Central

C-terminal

CAH0447827.1

1 1165

Domain	Start	End	Length (AA)	Confidence
N-terminal	1	127	127	0,2496
Central domain	128	538	412	0,6701
C-terminal	539	1165	626	0,0759

Note: Constraints were applied during segmentation.
Fixed 92 C-terminal predictions appearing before Central domain

Legend: N-terminal Central domain C-terminal

3D Structure with Domain Coloring

The structure is colored according to the domain segmentation: N-terminal (blue), Central (green), C-terminal (pink).

Domain Coloring

N-terminal
1-127

Central
128-538

C-terminal
539-1165

Taxonomy

	Name	Taxonomy ID	Lineage
Phage	Vibrio phage vB_VpaM_sm033 [NCBI]	2893233	Viruses > Duplodnaviria > Heunggongvirae > Uroviricota > Caudoviricetes
Host	No host information

Coding sequence (CDS)

Genbank protein accession

CAH0447827.1 [NCBI]

Genbank nucleotide accession

OV032902 [NCBI]

CDS location

range 9265 -> 12762
strand +

CDS

ATGTCTACTTTTGTACGTTTATTTAAATATGACGGCGATGGTGACGTAGAACTTAACTACGGCATCATTCCTACTTCTATTAACGCTGACCCAGAACGAGTAATCAGTCGCTACAGTCCAACTACGGATTATCCGGCTAACTCTTTTATTGTTCGTGATGGCGATGTGTACCATTCTCCTCATGGTTCTGCACCTGGTCCGTTTAACTCGGCAGAGTGGAATAACGTTGAAGGTTTATTTGCGTTAGTTCAAACGTTTGATACTGATGCTGCTTATGATGCAGATAGTGTTATGCTTCATCCTCGCGATGATGCTCCGTATTATGCTGAGGCAGCAACAGGCCCAGGCTCTCTAGATGGCGATGCATGGGTTCCGTTTACTGAAACTGATGCAGCTGTAACCCTTCACTGTTATCTCGACCCAGATAGCGATACAGAGCTTCCTACGGTCATCGCAGGTAAGTGCGTAGAGATCAAAGACATCTCTCTTCAAGAATCAGACTACCTGGATTACTTTGCTGGTTTCTATGATGCAACAAACTCGTCAGAAATGGCAGTGAATGCAGACGGTACAGGCACAGTAACTAATGGCTCTATTGTTCGCTGGATTCGTGACTTGACTGGTAAAGGCAATCACGGTATCCAAACAGACGATACGCTATGTCCTCGTTTCGTAGCCAAGCCAGGCGGCGGTGGTTATCTTCGATTTGACCCAGGCGGTCACTTTAAAGTTCCTACGATTACAACACCTACTGACCATTGGTTATCATGTGCTGGTCGTGGTGAAGCTGTCTTCCTTGGTATCGATAACGACCGTGATGAATCTAATCCTGGTGCTACTCTAGGTATGAAGAACCACACTGATACCAAAGCATGGATCTGGAGTGGTGAAGCTATCGCAACTGAGCGTGTCATCCAAGAACACGAAGATTATGTTCTAGAAGACTTGAAAGAACTAACCGCTAAAGCTGAAGGCGATGTCTCTCCGCTAGGTGGCTGTTTTGAAAACGAGTCTCGTTTGTATCGTGTTATCCCTGGATTCAATACGCTTGGTCAGACAATGGCACAGACGTTCAAGAACTGTACTATCTTTACTGGTGGTGTTTCTGGATGGGATGTTCGCTTTATTACAAGTCTTATCGAAACGTTCTATGGTTGTGCAAACTTTAACGAGTCAATCGGTAACTGGCAAACTAATAACTTGCAGCTATTGACGTCTACATTCCAAGGTGCTTTCAAGTTTAACCAAGACTTATCGGCATGGGATGTATCTAAGGTGCGTACGTTTGATTACTGTTTTGCAGATACCACTGCTTACAATAATGGCGGTGTTAATCTACTTAACTGGACAACTCCAGCAGCAGAATCAATGACGGGCATGTTCCTTAATGCGCAATCCTTTAATCAAGAGCTTGGTTACTGGGATACGTCAAGCGTTACGTCTATGGAAAGTATGTTTGATGGCGCAGAAACATTTAACCAAGACATTGGTTCTTGGGATGTTTCCTTAGTTGCTAACATGGACCGTATGTTTTACGGTACGACTGATTTCAATCAAGACATCTCTTGGTGGTGTGCGGATTCTATTCCTACCGAACCAACTGACTTTGATACGGATTCTGGTTTTGTAGACCAAGCCGCATTACAGCCTAACTGGGGCGGTTGTTTACCTACGGGCTTCATTGCCATCTATGAATACGATGATCCTGCTACAATGGGTGCAGCAACAACTGGCGTTGGTGGTGTTACTGATGGCACTAAAGTCGCATACGTTACGGACATTACTGGTAATGACAATCACGCTATCCAAGCAGACCCATTACTTCAGCCTACGTTCCGTGAAGTTGCAGATGGCAAAGGTTACTTAGAGTTTACTAATGACCAACATCTAGTTTGTGCGGCTATCACTAATCCAACTCACTGCGCATCTGCTCATGAAGGTCGTGGTACTGTACGTCACGCTACAATGGACAATACTGCTGGCATGAAAGTCGGCATTAACTTTGCAGCAGCGGATAAGAAATGGGAACTGGCTTCTCAGTCTTTTGCTGAAACAACTGTACTTCAAGATGATTGGGATTTCGAATTCGATCGCCGTGGAGCAGTGGCTAAGCAGAATGCTATTCCTGCTGGCTCTCAAGTTAAGTCTATGTTTGAAGACGAACAATACGTCACTGATGGCGTAGCTGCACTGACACTTCCTGACCTAACTGACATGACAGCTATGATGAAAGGCTGTTTCCGTTGGAATGAAGATATTGATGCATGGGATGTATCGTCTTGTACTGATATGACTTCTGCCTTTGAAGGCTGTGTAGCGTTTAATGGTACTTGTTCTTCTTGGAATGTGTCTTCTGTTGTGTCGTTTAACTCTATGTTTAAAACAGCAGCGCTATTCAATCAGGACATCACGAGTTGGGTTACGTCTTCTGCAACTGACATGTCTGGCATGTTTATGTTTGCTGGTAGCTTCACTCAAGATCTATCTGGTTGGAACACAGAGTTCGTTACTGACATGTCTCAGATGTTTGAGCGTTCATCAGTTAACTTCGACTTGTCTGCTTTAGATACAGCTGCGGTAGTTAACTTCAATCGAATGTTTGCTGACTCGAACTTCTTTAACCAAGACATCAACGCCGTAGATTTCTCTGCTGCTGAAGACATGGGTGGAATGTTCTACGGTGCAAAAGCATTTAACAACGGTGGTCAGGCCCTAGCTATTAATGCTCCTGTTGCTACAACACTTAATCAGTTCCTGAGCTTCAGTGATGTTTTCAATCAAGACATTTCTGCTATGAATCTGCCTGCTGTAGAAACACTAGGTGGCTTCCTGTCTGGCGCTCAGTCGTTTAACAACATCATTGCTGGTTTTAGTGCTCCTGTTGCCACAGATGTGAATTCGTTCTTTGCTTATGCTCCTGGTTTTAACCAAGACATTTCTGAGATGGTTCTACCTAACGTTACTGGCGTAAGTGCATTTGTACGTGGTTGTCCACTATATGACAATGGCGGCATGGCGGTTACGCATGACCCTGCTAAGTTTAACTTTGCTAATGTGGTTTCGTTAGATAACTTCTTTGAAGATTGTCCAGTATTCAATCAAGACGTAAGCACTATGGCTGCGGGTACACTTACTCGTACTAATGCTACGTTTAAGAATTGTGCTGCCTTCAATCAAGATGTATCTAGCTGGAACATGTCTAATGTTATTATTACGGAAGATATGTTTTCTGGTTGTACGAACTTTGATGGCGATCTAACTCTATGGTCTCTTGACTCACTAGAGAATGCTAACTACATGTTCTTGGATGCTGTGTCATTCACAGGTACAGGTGTTGGCGGTTGGTCGTTTGGTGCACTAATTACGGCAGAAGAAATGTTCCGTGGATGTACAGTAGTGGGTGACGTGTTTAGCGCATGGGACTTTACTGGTGTTAGTTCTACGGATGCATTTACAGATGCTCCATTAGTCGTTAGCTTCCCTATCGGTTACGTTTAA

Genome Context

Tertiary structure

PDB ID

2d6502ad9caba98d7fce6c62075ff22bd50a4f276539f97f9651cfb60570d2bd

ColabFold

Source ColabFold

Method ColabFold

Resolution 0,2769

Oligomeric State monomer

Download PDB

Model Confidence

Very high
pLDDT > 90

High
90 > pLDDT > 70

Low
70 > pLDDT > 50

Very low
pLDDT < 50

Protein

Domains

Domains [InterPro]

Domains [InterPro]

Tail Spike Domain Segmentation

Tail Spike Domain Segmentation

3D Structure with Domain Coloring

Domain Coloring

Taxonomy

Coding sequence (CDS)

Coding sequence (CDS)

Genome Context

Genome Context

Tertiary structure

Predicted Aligned Error (PAE)

Model Confidence