Protein

View in Explore
Genbank accession
ARM68441.1 [GenBank]
Protein name
tail fiber protein
RBP type
TF
Evidence GenBank
Probability 1,00
TF
Evidence RBPdetect
Probability 0,90
TF
Evidence RBPdetect2
Probability 0,87
Protein sequence
MMAVTLTIDIGDFGAESHPDDYVILYAPVFRESAERSGGLVSTAPRRVYLTGGKAAVEVEPGPLAVEFCVRNIKDSSTREFVVPAGGGSLGSLLAASLDYEPVVVTRLQELIDSAGDAAERLSGAALSSAEKADSSAKAAKRFEDAAAASAAAAKESQVAASSSASAAEVSASAADVSAKAAKASEGAAASSASAAKTSQSAAESALSGAKSAQAAAASSAGNAKKSEDAARAAQSRSEEIATSTSWDGDKLTVNGKTSPSLRGPKGDKGETGSVENVSWDDISDKPDLASTWEQVKGKPATYPPAPHTHTTAQVEGLDDALAGKADKGHKHKIEDVDGLKERLDQQEGAARDVYDSIIDVRRKISGKADESYVKSQIASTRSYVDKAVADGSKIKVVSSLPSSPDSSTVYIVV
Physico‐chemical
properties
protein length:414 AA
molecular weight: 42310,04130 Da
isoelectric point:5,09933
aromaticity:0,04106
hydropathy:-0,32657

Domains

Domains [InterPro]
DC_1812
STR
26–412
DC_1812
PF12789
STR
303–346
PF12789
ARM68441.1
1 414
Architecture
STR
STR 26-412 |
Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Taxonomy

  Name Taxonomy ID Lineage
Phage Corynebacterium phage IME1320_01
[NCBI] 		1965535 Viruses > Duplodnaviria > Heunggongvirae > Uroviricota > Caudoviricetes
Host Corynebacterium simulans
[NCBI] 		146827 cellular organisms > Bacteria > Bacillati > Actinomycetota > Actinomycetes > Mycobacteriales

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
ARM68441.1 [NCBI]
Genbank nucleotide accession
KY653127.1 [NCBI]
CDS location
range 34452 -> 35696
strand +
CDS
ATGATGGCGGTAACACTTACAATTGATATAGGAGACTTTGGTGCTGAGTCGCATCCTGATGATTACGTCATCTTGTACGCGCCGGTGTTCCGAGAATCTGCAGAACGCTCTGGGGGTCTGGTGTCTACGGCGCCGCGGAGGGTTTACCTTACTGGGGGGAAAGCGGCGGTCGAAGTTGAGCCAGGGCCGCTTGCGGTGGAGTTCTGTGTGCGCAATATTAAAGATTCCTCGACTCGAGAGTTTGTGGTCCCTGCTGGTGGAGGAAGTCTTGGCTCCTTGCTTGCGGCTTCGCTGGATTATGAGCCGGTGGTGGTTACACGTCTGCAGGAGCTGATCGATTCGGCCGGGGATGCTGCGGAACGGCTTTCTGGTGCGGCTTTGTCGTCGGCGGAAAAGGCTGATTCGTCCGCTAAAGCGGCGAAGAGGTTTGAGGATGCGGCGGCGGCGTCGGCTGCGGCGGCTAAAGAGTCTCAGGTGGCGGCGTCGTCGTCAGCGTCGGCTGCTGAGGTGTCTGCGAGCGCGGCTGATGTGTCTGCTAAGGCAGCTAAAGCTTCGGAGGGGGCGGCGGCGTCGTCAGCGTCGGCTGCTAAGACGTCGCAGTCTGCGGCGGAGTCGGCACTGTCTGGCGCTAAGTCTGCGCAGGCTGCGGCAGCGTCGTCTGCTGGTAATGCGAAAAAGTCTGAGGATGCGGCGAGGGCAGCGCAGTCACGTTCTGAGGAGATCGCCACGAGCACCTCGTGGGATGGTGACAAGCTGACCGTGAATGGTAAGACCTCCCCGTCTCTACGCGGCCCTAAGGGTGATAAGGGCGAGACCGGCAGTGTAGAAAATGTGTCGTGGGATGATATTTCGGATAAGCCCGATTTGGCTTCCACGTGGGAGCAGGTGAAAGGCAAGCCCGCCACGTATCCACCCGCTCCGCATACGCACACTACGGCGCAGGTCGAGGGGCTTGATGACGCGCTGGCTGGCAAGGCTGATAAGGGGCACAAGCATAAGATCGAGGATGTGGATGGTCTTAAAGAGCGCCTTGACCAGCAGGAGGGGGCTGCGAGGGATGTTTACGATTCGATTATTGACGTTAGAAGGAAGATCAGCGGCAAGGCTGATGAGTCCTACGTGAAATCCCAGATTGCGTCGACGCGGTCTTATGTGGATAAGGCGGTGGCTGATGGCAGCAAAATTAAGGTTGTGTCGTCGCTGCCCTCATCTCCGGATTCTTCGACCGTCTACATTGTGGTCTAG

Genome Context

Genome Context

Tertiary structure

PDB ID
04e9d3a3cfc708ee126a527a040d9622c03e97103d50c4fca5b27ce675d1c96e
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,7736
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50

Literature

Title Authors Date PMID Source
Analysis of active prophages from bacterial high-throughput sequencing data Sun,Q., Zhang,X., Xing,S. and Tong,Y.-G. 2018-12-28 — GenBank