Protein

View in Explore
Genbank accession
QBQ72763.1 [GenBank]
Protein name
central tail fiber J
RBP type
TF
Evidence Phold
Probability 1,00
TSP
Evidence RBPdetect
Probability 0,61
TF
Evidence RBPdetect2
Probability 0,89
Protein sequence
MSRYKLGSYTVTHWNSWDRVARDPVTIGAYIITGAASTAAVGSLAYFGFMAVGYIATTLVTSALLSALSPKPDFGSIGSGGLLINSKGATEPAQVVYGQVRKGGTVTFVESTGDNNKILHQIVVLAAHEVEEIGDIYLNDEIATMSNEDVTSAPFNGYVKIYKHRGNQTSINDAFANSTSTLANTIVSETSADNDFVGKGLAYLYCRFTYDQDAFVNGLPVVTAVIKGKKVTKTVSGVDQTPVYSNNAAWVIKDYLTSNYGMNDDDINIDYTTFEAAADVCDQTDILSDGTAQYTINGVINLNQPLRTVLEQMMTSCGGTLFWGAGMWKLYAGEFTTPTKTFTLDDLRSGVSLDTRVSSRDNFNKVTGTFIDKDQDWISADYPAVTSATFLTEDDDVETPLDLALPYTTNSFAAQRLAKQMLFRSREQISLSADFGLEALDVEVGDFVKFRNERYGWGAGNEKTFEVIGWRLNPDPENLDLRVNLTLRESSQAAFGFTVADEKAIVSNNSTLLKYYEVPSIGVTVSQEYREVNENVVNVLVVQVNSTAIERVDSVILKYKKTSDANFKSVGQTILVNEGNSAGRFEIVGVDAPQIDEGVINYTVSVTPVNALGYKGDTVTTTYNLTADTTPPSEPSSLSHLLSGGTIFFNWTAVTDLDLSHYKVYYSSTTSDSFGSASVQLVVDKVARPATSISYPALAGKFFVSSVDKTGNESAEAATTTVDSSELPQLGNSVTHTESPSFSGSKTNLTVSGGSLLLSSYSTAGSTGTYSFDHNGNDYFDVGTSRTVRLSSAVTVSRKHLDAVSGEINWDDIPNNWDTWPDNWDTWTDETADFADFSVVLQARAATTVAGLSSAQWVVASGEVVGQYVQFRAILSNTNAKITPNITALSATVEY
Physico‐chemical
properties
protein length:895 AA
molecular weight: 96731,94560 Da
isoelectric point:4,53816
aromaticity:0,09944
hydropathy:-0,14212

Domains

Domains [InterPro]
DC_0187
STR
4–893
DC_0187
IPR032876
ATT
306–466
IPR032876 IPR013783
QBQ72763.1
1 895
Architecture
STR
ATT
STR
STR 4-305 | ATT 306-466 | STR 467-893 |
Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Tail Spike Domain Segmentation

Tail Spike Domain Segmentation

This protein has been segmented into three structural domains: N-terminal, central domain, and C-terminal.

Domain Layout
N-terminal
Central
C-terminal
QBQ72763.1
1 895
Domain Start End Length (AA) Confidence
N-terminal 1 37 37 0,6852
Central domain 38 236 200 0,1132
C-terminal 237 895 658 0,2220
Legend: N-terminal Central domain C-terminal
3D Structure with Domain Coloring

The structure is colored according to the domain segmentation: N-terminal (blue), Central (green), C-terminal (pink).

Domain Coloring
N-terminal
1-37
Central
38-236
C-terminal
237-895

Taxonomy

  Name Taxonomy ID Lineage
Phage Roseobacter phage CRP-6
[NCBI] 		2559285 No lineage information
Host Rhodobacteraceae bacterium
[NCBI] 		1904441 cellular organisms > Bacteria > Pseudomonadati > Pseudomonadota > Alphaproteobacteria > Rhodobacterales

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
QBQ72763.1 [NCBI]
Genbank nucleotide accession
MK613348.1 [NCBI]
CDS location
range 18839 -> 21526
strand -
CDS
ATGTCAAGATATAAATTAGGCAGTTACACAGTAACGCACTGGAACTCTTGGGACAGAGTAGCTCGTGATCCAGTTACTATCGGGGCTTACATTATAACTGGCGCTGCTTCTACTGCGGCGGTAGGCTCCCTTGCATACTTTGGCTTCATGGCCGTAGGTTATATCGCCACCACACTTGTTACCTCAGCCCTTCTATCAGCACTATCTCCTAAGCCTGACTTTGGTTCTATCGGCAGTGGTGGACTTCTTATTAACAGTAAGGGTGCTACAGAACCTGCACAGGTTGTATATGGTCAAGTCCGTAAGGGTGGTACAGTCACTTTCGTTGAGTCCACTGGGGACAACAACAAGATACTGCATCAGATCGTCGTACTAGCTGCACACGAAGTAGAAGAGATTGGCGACATCTACCTAAACGATGAAATCGCCACTATGTCTAACGAGGATGTCACATCTGCCCCATTCAACGGTTATGTAAAGATATACAAACACCGTGGCAACCAGACAAGTATAAACGATGCTTTTGCTAACAGCACAAGCACACTTGCGAACACTATTGTATCTGAGACATCTGCTGATAACGATTTTGTTGGTAAGGGTTTAGCTTACTTGTATTGTCGTTTTACATACGACCAAGATGCCTTTGTAAACGGCCTTCCAGTTGTGACAGCTGTTATTAAGGGTAAGAAGGTTACTAAGACTGTATCTGGTGTCGATCAAACACCTGTGTACTCTAACAATGCTGCTTGGGTTATCAAGGACTACTTGACATCTAACTACGGTATGAACGACGATGACATCAACATCGACTACACTACCTTTGAGGCAGCTGCTGACGTTTGTGACCAGACTGACATCTTATCAGATGGTACTGCGCAGTACACAATCAATGGTGTTATAAACCTAAATCAACCCCTACGAACTGTACTTGAACAGATGATGACTTCATGTGGTGGTACTCTCTTCTGGGGTGCTGGTATGTGGAAGTTGTATGCTGGTGAGTTTACAACACCAACCAAGACGTTCACATTAGATGATCTTAGGTCTGGGGTATCCCTTGATACTAGAGTTTCCTCTAGGGATAACTTTAACAAGGTAACTGGTACTTTCATCGACAAAGATCAAGACTGGATTAGCGCTGACTACCCAGCTGTCACCTCTGCTACCTTCTTGACTGAGGATGACGATGTAGAGACACCCCTTGACTTAGCTCTACCCTACACCACAAACAGCTTTGCTGCACAAAGGTTGGCAAAACAAATGCTGTTCCGCAGCAGGGAACAAATCTCATTGTCTGCCGACTTTGGTTTGGAGGCATTAGATGTTGAGGTGGGAGACTTTGTTAAGTTTCGTAACGAGCGTTACGGATGGGGTGCGGGTAATGAGAAGACCTTTGAGGTTATAGGTTGGAGACTTAACCCTGACCCAGAGAACTTAGACCTTCGGGTTAACCTAACTTTGCGTGAGAGTAGTCAAGCTGCCTTTGGGTTTACAGTTGCAGACGAAAAAGCTATTGTATCTAACAACTCAACCCTACTGAAGTACTATGAAGTACCAAGCATAGGTGTTACAGTTAGCCAAGAATACCGTGAAGTAAATGAGAACGTAGTTAACGTACTTGTGGTACAGGTAAACAGCACTGCTATCGAAAGGGTAGACTCAGTTATCCTCAAGTACAAGAAGACTTCTGATGCTAACTTTAAATCTGTTGGTCAGACAATCCTTGTTAACGAGGGCAACTCAGCTGGAAGGTTCGAGATTGTTGGTGTTGATGCACCTCAGATCGACGAGGGGGTTATCAACTACACTGTCTCAGTTACACCAGTTAACGCTCTTGGTTACAAGGGTGATACAGTAACTACAACCTACAACCTGACTGCGGATACGACACCACCATCTGAACCTAGTTCACTCTCCCATTTACTATCGGGGGGTACTATCTTCTTTAACTGGACAGCTGTTACTGATCTTGATTTGTCACACTATAAAGTCTACTACTCCTCTACTACTTCAGATAGTTTTGGTTCTGCTTCCGTTCAGCTTGTAGTGGACAAAGTTGCTAGGCCAGCTACCTCAATTTCCTACCCAGCACTTGCGGGTAAGTTCTTTGTGTCGTCAGTTGACAAGACTGGTAACGAGAGCGCAGAGGCTGCTACAACAACTGTTGATTCATCTGAGCTACCCCAACTTGGTAACAGTGTAACTCACACTGAAAGCCCCTCCTTTAGTGGCTCTAAGACTAACCTTACGGTATCTGGTGGTTCTTTGTTACTTTCCAGTTACTCAACTGCTGGCTCTACTGGTACATACAGCTTTGACCACAATGGTAACGACTACTTCGATGTTGGTACTTCTCGTACAGTCAGATTGTCCTCTGCCGTAACAGTTTCCCGTAAACATCTGGATGCTGTTAGTGGAGAAATCAACTGGGATGATATACCTAACAACTGGGACACATGGCCTGATAACTGGGATACATGGACCGACGAGACTGCTGACTTTGCTGACTTCTCTGTTGTTCTACAAGCTAGGGCTGCAACTACAGTGGCTGGTTTGTCTAGCGCACAGTGGGTCGTTGCTTCTGGTGAAGTTGTTGGTCAGTATGTACAGTTCAGAGCAATCCTCTCAAACACTAATGCAAAGATAACCCCGAACATAACAGCACTTAGTGCTACAGTGGAGTATTAA

Genome Context

Genome Context

Tertiary structure

PDB ID
68d12a89e82df4593483d7048bcde27f6555cd0692fb64207a3f4d9b3c516c1b
ColabFold
Source ColabFold
Method ColabFold
Resolution 0,2833
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50

Literature

Title Authors Date PMID Source
Diverse, abundant and novel viruses infecting the marine abundant Roseobacter RCA lineage Zhang,Z.F., Chen,F., Chu,X., Zhang,H., Luo,H.W., Zhai,Z.Q., Yang,M.Y. and Zhao,Y.L. 2019 — GenBank