Protein

View in Explore
Genbank accession
CAB4182255.1 [GenBank]
Protein name
Collagen triple helix repeat
RBP type
TF
Evidence RBPdetect
Probability 0,90
TF
Evidence RBPdetect2
Probability 0,81
Protein sequence
MAIKIRLPYNTSSGVLPTNTNLVLGELAVNTADGKLFTLNSSGATIQINTTGLTGNTGAQGSAGAQGTQGSQGIQGPTGFAGLTGSQGPAGTQGTQGPQGLQGVATGPQGLAGLQGLTGPQGGTGPQGTQGPQGLQGFRGPTGPGGPLGATGPQGVLGAPGGGGAQGAQGPQGRTGSTGPCVPAPVGVCAGGGTCFLGSSYTTMADGSRKMMRDVRVGDWLMGAFGEANQVLALEDLVLGNRPMFVINYTHHTTGDHTHICSDKQFVSLEPEETITNDWNIWYNCVLSDGSFVMLYNKGIDNPQDRLGKLDLGIVLQTVDGGKEVEQIDSYDLPYDTKLYNFVMSGSHTYFADGYAVTGWPRDDDFDYVQWKQIGETSKIEDWMTPKLHGVN
Physico‐chemical
properties
protein length:392 AA
molecular weight: 40474,50730 Da
isoelectric point:4,80684
aromaticity:0,07143
hydropathy:-0,31046

Domains

Domains [InterPro]
DC_2298
STR
5–110
DC_2298 G3DSA:2.170.16.10
IPR050149
Unmapped
52–180
IPR050149 IPR036844
IPR008160
STR
52–103
IPR008160 DC_0620
CAB4182255.1
1 392
Architecture
STR
STR 5-385 |
Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Taxonomy

  Name Taxonomy ID Lineage
Phage uncultured Caudovirales phage
[NCBI] 		2100421 Uroviricota > Caudoviricetes > Peduoviridae > Maltschvirus maltsch >
Host No host information

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
CAB4182255.1 [NCBI]
Genbank nucleotide accession
LR797022 [NCBI]
CDS location
range 144468 -> 145646
strand -
CDS
ATGGCTATCAAGATCAGACTTCCCTATAACACGTCTTCCGGTGTACTTCCTACCAATACAAACTTGGTACTAGGTGAGCTAGCAGTCAATACTGCAGATGGAAAGTTGTTTACACTAAATTCAAGTGGCGCTACTATACAGATAAATACTACGGGACTCACTGGAAATACCGGAGCTCAAGGAAGTGCAGGCGCACAGGGAACACAGGGTTCTCAAGGTATCCAAGGACCAACTGGGTTTGCTGGACTTACTGGAAGTCAAGGACCAGCCGGTACACAGGGTACACAGGGTCCGCAGGGCTTGCAGGGCGTTGCTACTGGCCCACAGGGCTTAGCTGGTCTGCAAGGCTTGACCGGTCCTCAGGGTGGTACCGGTCCTCAGGGTACACAGGGTCCGCAAGGTCTGCAAGGATTTAGAGGCCCGACCGGTCCGGGTGGACCATTAGGAGCTACAGGTCCACAGGGCGTGCTTGGTGCACCCGGTGGAGGTGGTGCTCAAGGCGCACAGGGTCCACAAGGAAGAACGGGTTCTACCGGGCCATGTGTTCCGGCTCCAGTTGGTGTTTGTGCTGGCGGTGGCACTTGTTTCTTAGGATCATCTTACACCACGATGGCAGATGGTTCAAGAAAGATGATGAGAGATGTTAGGGTTGGTGATTGGTTGATGGGAGCCTTTGGCGAGGCTAATCAAGTACTAGCTCTAGAAGATCTAGTTCTTGGTAATAGACCGATGTTTGTTATTAACTACACACATCATACTACAGGTGATCATACTCATATCTGTTCAGATAAACAATTTGTATCATTGGAACCGGAAGAGACTATTACAAATGACTGGAATATCTGGTATAATTGCGTGCTTTCAGATGGATCTTTCGTTATGCTTTATAATAAAGGAATAGATAATCCACAAGACAGACTGGGTAAACTTGATTTAGGAATAGTTCTTCAGACTGTAGATGGAGGAAAAGAAGTTGAGCAGATTGATAGCTACGATCTTCCATATGATACAAAGCTTTATAACTTCGTCATGTCAGGCAGTCACACTTACTTTGCTGATGGATATGCAGTAACAGGTTGGCCCCGCGATGATGACTTTGATTATGTTCAATGGAAACAGATTGGAGAAACATCTAAGATAGAAGACTGGATGACTCCTAAACTACATGGAGTTAACTAA

Genome Context

Genome Context

Tertiary structure

PDB ID
f77fedb0970d6d7b1cc9d23279a95a299cb2b0a45ce6cbf2288c258c1ae62ea1
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,6526
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50