Protein

View in Explore
Genbank accession
QBP05602.1 [GenBank]
Protein name
tail fibers protein
RBP type
TF
Evidence GenBank
Probability 1,00
TF
Evidence RBPdetect
Probability 0,88
Protein sequence
MAVVGIPGWIGTSAVAETGQRWMTAASRELRLGNPSWMSQFAGRSREIIHTLGADHNFNGQWFRDRCFEAGGAPIVFNITGNLVSYSKDVPLFFMYGDTPNEYVTLNIHGGVHMWGRGGNGTVNGNPGTNGGDVIQNDIGGRLRIWNYGVIASGGGGGGAVSLQNSWAPNATAGGGGGRPFGIGGGGVNWPGGNASYDAPGGAGYTSQFGGGNGGDAGAWGGDGWGNHLSRSGGGAPGRAVFGSSPSWGATGTIYGSWI
Physico‐chemical
properties
protein length:259 AA
molecular weight: 26340,55180 Da
isoelectric point:6,96445
aromaticity:0,11197
hydropathy:-0,26062

Domains

Domains [InterPro]
IPR048291
ATT
1–42
IPR048291 IPR007932
DC_2135
STR
1–141
DC_2135
QBP05602.1
1 259
Architecture
ATT
STR
RBD
ATT 1-42 | STR 43-141 | RBD 142-259
Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Taxonomy

  Name Taxonomy ID Lineage
Phage Escherichia phage PHB12
[NCBI] 		2530037 Viruses > Duplodnaviria > Heunggongvirae > Uroviricota > Caudoviricetes
Host Escherichia coli
[NCBI] 		562 cellular organisms > Bacteria > Pseudomonadati > Pseudomonadota > Gammaproteobacteria > Enterobacterales

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
QBP05602.1 [NCBI]
Genbank nucleotide accession
MK524178.1 [NCBI]
CDS location
range 51894 -> 52673
strand +
CDS
ATGGCAGTAGTAGGAATCCCTGGTTGGATTGGGACCTCAGCCGTTGCTGAAACGGGTCAAAGATGGATGACGGCTGCTTCAAGGGAACTTCGTTTAGGAAACCCTTCATGGATGTCCCAATTCGCGGGCCGTTCAAGAGAAATAATTCATACACTTGGTGCAGACCATAACTTTAACGGACAATGGTTCCGTGACCGTTGCTTTGAAGCTGGCGGCGCTCCTATAGTGTTTAATATCACCGGAAATTTGGTATCATATAGTAAAGATGTTCCATTATTCTTTATGTATGGCGATACACCAAATGAATATGTTACTTTGAATATTCATGGTGGAGTTCATATGTGGGGACGAGGTGGTAACGGTACTGTAAACGGAAACCCAGGCACAAATGGCGGCGATGTAATCCAAAATGATATCGGCGGAAGACTTCGTATTTGGAACTATGGCGTTATTGCATCAGGCGGTGGCGGTGGTGGTGCAGTGTCATTACAGAATAGCTGGGCGCCAAATGCTACAGCAGGTGGCGGTGGTGGTAGACCATTTGGCATCGGCGGAGGTGGCGTTAATTGGCCAGGTGGTAATGCTAGTTATGACGCCCCGGGCGGTGCCGGTTACACTTCCCAATTCGGCGGAGGCAATGGCGGTGATGCTGGCGCTTGGGGCGGAGATGGATGGGGTAATCACTTATCTAGATCTGGCGGTGGTGCTCCTGGCAGAGCAGTATTCGGAAGTTCACCGTCATGGGGTGCTACAGGCACAATCTACGGCTCCTGGATTTAA

Genome Context

Genome Context

Tertiary structure

PDB ID
60cff37ae0dce92128d5e5d93f839c1edba5b0e5fa2b7acea233c11fee80223b
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,8309
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50

Literature

Title Authors Date PMID Source
Identifican and characterization of a broad host-range O157 phage against Escherichia coli O157 Chen,Y., Yang,L., Song,J., Qian,P. and Li,X. 2023-09 — GenBank