Protein

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UniProt accession
A0A059PAD5 [UniProt]
Protein name
Collagen-like protein
RBP type
TF
Evidence GenBank
Probability 1,00
TF
Evidence Phold
Probability 1,00
TF
Evidence RBPdetect
Probability 0,89
TF
Evidence RBPdetect2
Probability 0,95
Protein sequence
MIKTLSMSTTGLKFADNNTPIYLTAENNGIIFKDTTYLPKVYIKQNDVGYLTNFPATWQDEKITFTSAQLANLPSGSYRIEVWFEHGSDTLIYPDYGFLKLNINHNATDIDGNVISSITVEQFQRQFSTLSQELTDHILEIKVGPQGDKGDTGPQGVQGIQGERGKQGEQGQQGVQGVAGKDFSIAETFPSVASMSSDNLTKGDFVMISSTVEDPDNAKLYLWNGTEFTFVTDMSGATGIKGDTGEQGIQGKQGVQGEQGKQGIQGIQGVAGKDGKDAVINVVTQAEYDKLPDKTGVYFIGG
Physico‐chemical
properties
protein length:302 AA
molecular weight: 32649,84600 Da
isoelectric point:4,60068
aromaticity:0,08940
hydropathy:-0,42848

Domains

Domains [InterPro]
DC_1340
STR
100–301
DC_1340
IPR050149
Unmapped
144–275
IPR050149
IPR008160
STR
144–180
IPR008160 G3DSA:1.20.5.320
G3DSA:1.20.5.320
STR
153–204
G3DSA:1.20.5.320 IPR008160
A0A059PAD5
1 302
Architecture
STR
STR 100-301 |
Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Taxonomy

  Name Taxonomy ID Lineage
Phage Leuconostoc phage LN03
[NCBI] 		1262515 Uroviricota > Caudoviricetes > Mccleskeyvirinae > Limdunavirus LN03 >
Host Leuconostoc pseudomesenteroides
[NCBI] 		33968 cellular organisms > Bacteria > Bacillati > Bacillota > Bacilli > Lactobacillales

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
AFY98248.1 [NCBI]
Genbank nucleotide accession
KC013022 [NCBI]
CDS location
range 25042 -> 25950
strand -
CDS
ATGATTAAGACATTATCTATGAGTACAACAGGATTAAAGTTTGCAGATAATAACACGCCAATATATTTAACGGCTGAGAACAACGGTATTATTTTTAAAGACACCACTTATCTACCAAAGGTTTATATCAAGCAAAACGATGTTGGTTACCTCACTAATTTCCCAGCGACATGGCAAGATGAAAAAATTACTTTCACGAGCGCACAATTGGCCAATCTTCCATCTGGCAGTTATCGTATAGAAGTTTGGTTTGAACATGGTAGTGATACCCTAATTTATCCGGACTATGGCTTTTTGAAACTTAATATTAATCATAACGCTACTGACATCGATGGAAATGTTATCTCTTCTATTACTGTCGAACAATTTCAACGACAGTTTAGTACCCTATCTCAAGAACTCACGGACCACATACTAGAAATAAAAGTTGGTCCACAAGGAGATAAGGGTGATACTGGACCACAAGGAGTTCAGGGTATTCAGGGCGAACGTGGCAAGCAAGGTGAACAAGGACAACAAGGTGTTCAGGGAGTAGCGGGTAAAGATTTCTCGATTGCAGAAACGTTTCCGAGTGTTGCGTCAATGAGCAGTGACAATTTAACAAAGGGAGACTTTGTTATGATTTCATCAACTGTTGAAGACCCAGACAACGCAAAACTATATTTGTGGAACGGTACGGAATTTACTTTTGTTACTGATATGTCAGGTGCTACTGGTATCAAAGGAGACACTGGTGAACAAGGTATACAAGGTAAACAAGGTGTTCAAGGTGAACAGGGTAAACAAGGTATACAAGGTATTCAGGGAGTAGCTGGTAAAGACGGAAAAGACGCCGTCATCAACGTTGTTACGCAAGCAGAATACGATAAACTACCTGATAAAACTGGTGTTTACTTTATAGGAGGTTGA

Genome Context

Genome Context

Gene Ontology

Description Category Evidence (source)
GO:0031012 extracellular matrix Cellular Component IEA:TreeGrafter (UniProt)
GO:0005615 extracellular space Cellular Component IEA:TreeGrafter (UniProt)

Tertiary structure

PDB ID
97bdc715b3798a7335ca029e626d3af32e25e0eb2eb3c3654acc3c8bc9434451
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,8004
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50

Literature

Title Authors Date PMID Source
— — 24561391 PubMed