Protein

View in Explore
Genbank accession
QYW08446.1 [GenBank]
Protein name
tail fiber protein
RBP type
TF
Evidence GenBank
Probability 1,00
TF
Evidence Phold
Probability 1,00
TF
Evidence RBPdetect
Probability 0,77
Protein sequence
MALIYDFNEDLDPKAKSKFVGARARRDISDVLDFCDGGVAIQDPSEGLFVRVWRTMLRNDGTYLGWEDGTNEVRIGDGIDAGISTISLDFDSNMNYVFVFVRADKTGALSYFNVQQGRRIIVELGQVDYAKVALDDKRPGATAWAQVIVPYTRGGNMYVRTQNENYTQEHLEVDTGKVFRPLVKCGMGTNLRFQVQFRGHM
Physico‐chemical
properties
protein length:201 AA
molecular weight: 22664,33730 Da
isoelectric point:5,44577
aromaticity:0,10945
hydropathy:-0,31841

Domains

Domains [InterPro]

No domain annotations available.

Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Taxonomy

  Name Taxonomy ID Lineage
Phage Pseudomonas phage vB_Pae_QDWS
[NCBI] 		2866656 Viruses > Duplodnaviria > Heunggongvirae > Uroviricota > Caudoviricetes
Host Pseudomonas sp.
[NCBI] 		306 cellular organisms > Bacteria > Pseudomonadati > Pseudomonadota > Gammaproteobacteria > Pseudomonadales

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
QYW08446.1 [NCBI]
Genbank nucleotide accession
MZ687409.1 [NCBI]
CDS location
range 38592 -> 39197
strand +
CDS
ATGGCGTTGATCTACGACTTCAACGAAGACCTCGATCCCAAGGCCAAGTCGAAGTTCGTAGGTGCCCGAGCACGTCGCGACATCAGTGACGTGCTCGACTTCTGCGACGGCGGGGTCGCCATCCAGGACCCCTCCGAGGGACTATTCGTCCGGGTATGGCGTACCATGCTGCGGAACGACGGCACCTACCTCGGCTGGGAGGACGGCACCAACGAAGTGCGCATTGGCGACGGCATCGACGCGGGTATCTCGACGATATCTCTGGACTTCGACAGTAACATGAACTACGTCTTCGTGTTCGTCCGAGCAGACAAGACCGGAGCCCTATCGTACTTCAACGTACAGCAGGGGCGTCGTATCATAGTCGAGCTGGGCCAAGTGGACTATGCCAAGGTAGCCCTCGACGACAAGCGCCCCGGCGCAACTGCTTGGGCACAGGTCATCGTACCTTACACACGGGGCGGCAACATGTATGTCCGCACGCAGAACGAGAACTACACCCAGGAGCACCTGGAGGTGGACACCGGCAAGGTGTTCCGGCCTCTAGTCAAGTGTGGTATGGGAACCAACCTACGCTTCCAAGTCCAATTCAGAGGGCACATGTAA

Genome Context

Genome Context

Tertiary structure

PDB ID
3b5c1abe9c472595dfb0fc291d88e5a3757e0725d0bc7c9394f45ef44ca4cb3d
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,5599
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50

Literature

Title Authors Date PMID Source
Pseudomonas phage vB_Pae_QDWS, complete sequence Xuan,G.H., Wang,J.X. and Lin,H. 2022-03-09 — GenBank