Protein

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Genbank accession
XQN11452.1 [GenBank]
Protein name
tail protein
RBP type
TSP
Evidence DepoScope
Probability 1,00
Protein sequence
MPLYSQSIKNLKSGISQQPEILKYPEQGNQQINGWSSEIAGLQKRPPIIFNRMLGRKGLYGDAPFIHLINRDEHERYYAIFTGSEIKVIGLDGTPYVVKGNFSYVQTNNPRKDLRMITVADYTFVVNTSKVIKEDTSKNLPDFNEKQDALINVRGGQYGRTLIVGFNGAEQAKYLIPNGDKPEHVKNTDSQFIAEELAKQMREKLPTWTFTVGQGYIHIQAPQGTFIENLYTKDGYADQLLNPVTHYVQTFNKLPLVAPDGYMVKIVGDTSKTADSYYVKYSAAKKVWAETLGWDTPKGFLDNTMPHTLVRESDGTFSFKVHEWKQRRCGDEDTNPLPSFVDSSITDIFFYRNRLGFLSGENVILSRTSRYFDFFPASVANNSDDDPIDVAISHNRISNLKFAVPFSEELLLWSDEAQFTLRSSSILSARTIELNLVTEFDVSDQARPFGIGRGIYFANPRSTFTSISRYYAVQDVSSVRNAEDMTAHVPNYIPNGVFSIHGSNTENFCTVLTKGAPSKIFIYKYLYTDEQLLQQSWSHWDLGEECTILACTTIGSKMTIIFENQHNVFVGTVRFTRDIKDFPQEPYRSHLDLKTLYTIPTDKYNITTNITRIRLADIYNSARFTRGKVTLMGVDGRNFEFQPKEGFWASDDTLDLQGDYSGKQFVVGFNIPFTYEFAKFLIKKADKDGSMVTEDIGRLQLRRAWVNYEESGAFSVRVVHGSTSFNYEMSGSRLGSRELHIGELNISTDQFRFPVTGNALHTQVFLLSDSPTPLNIIGCGWEGSYIRRSRSL
Physico‐chemical
properties
protein length:792 AA
molecular weight: 89942,20930 Da
isoelectric point:6,38395
aromaticity:0,12121
hydropathy:-0,39508

Domains

Domains [InterPro]
IPR058003
TTP
1–791
IPR058003
XQN11452.1
1 792
Architecture
TTP
TTP 1-791 |
Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Tail Spike Domain Segmentation

Tail Spike Domain Segmentation

This protein has been segmented into three structural domains: N-terminal, central domain, and C-terminal.

Domain Layout
N-terminal
Central
C-terminal
XQN11452.1
1 792
Domain Start End Length (AA) Confidence
N-terminal 1 144 144 0,9904
Central domain 145 343 200 0,0957
C-terminal 344 792 448 0,2501
Legend: N-terminal Central domain C-terminal
3D Structure with Domain Coloring

The structure is colored according to the domain segmentation: N-terminal (blue), Central (green), C-terminal (pink).

Domain Coloring
N-terminal
1-144
Central
145-343
C-terminal
344-792

Taxonomy

  Name Taxonomy ID Lineage
Phage Pasteurella phage GXMP-H1
[NCBI] 		3399664 Viruses > Duplodnaviria > Heunggongvirae > Uroviricota > Caudoviricetes
Host Pasteurella multocida
[NCBI] 		747 cellular organisms > Bacteria > Pseudomonadati > Pseudomonadota > Gammaproteobacteria > Pasteurellales

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
XQN11452.1 [NCBI]
Genbank nucleotide accession
PQ878676 [NCBI]
CDS location
range 18464 -> 20842
strand +
CDS
ATGCCACTATATAGCCAAAGTATTAAGAATTTAAAAAGTGGTATCAGCCAACAGCCAGAGATTTTAAAATATCCAGAACAAGGCAACCAACAAATTAATGGGTGGTCTAGTGAAATCGCAGGGTTACAAAAGAGACCTCCTATTATCTTCAATCGTATGCTTGGTCGTAAAGGTCTCTATGGGGACGCTCCGTTCATTCATTTAATTAATCGTGATGAACATGAGAGATACTACGCTATCTTCACTGGGTCTGAAATCAAGGTGATTGGTCTTGATGGGACACCTTATGTAGTCAAAGGAAATTTCTCTTATGTGCAAACAAATAACCCACGCAAAGACCTCCGAATGATTACAGTCGCTGATTATACTTTCGTAGTTAATACTTCTAAAGTAATCAAAGAGGATACCTCAAAGAATCTACCAGACTTCAATGAGAAGCAAGATGCTTTGATAAATGTTCGAGGTGGACAATATGGGAGAACTCTCATTGTAGGTTTTAACGGTGCAGAACAAGCAAAATATTTGATTCCAAACGGGGATAAACCAGAACACGTTAAGAACACTGACTCTCAATTTATTGCTGAGGAATTAGCCAAACAAATGAGAGAAAAGTTACCAACATGGACGTTTACTGTTGGTCAAGGCTACATTCACATTCAAGCACCACAAGGCACATTCATTGAGAATCTTTATACGAAAGACGGGTATGCAGACCAATTGTTAAACCCTGTGACCCATTATGTCCAGACGTTTAATAAGTTACCGTTAGTGGCACCAGATGGTTACATGGTGAAGATTGTTGGGGACACATCAAAGACAGCTGATAGTTATTACGTTAAGTATAGCGCAGCCAAGAAGGTGTGGGCAGAGACTTTAGGTTGGGATACACCTAAAGGGTTCCTTGATAATACAATGCCTCATACTTTAGTTCGTGAGTCAGACGGTACATTCTCATTTAAAGTCCATGAATGGAAACAGAGACGGTGTGGTGATGAAGACACAAACCCACTACCGTCTTTCGTAGATAGTTCTATTACAGATATCTTCTTCTACCGTAACCGACTAGGTTTTCTTAGTGGTGAGAACGTAATCCTAAGTAGGACATCACGTTACTTCGACTTCTTCCCAGCTAGTGTAGCAAATAATTCAGATGATGACCCTATTGATGTAGCAATTAGTCATAATAGGATTAGCAACCTTAAATTTGCGGTCCCATTTAGCGAGGAATTATTATTGTGGTCTGATGAAGCTCAGTTTACACTAAGGTCTTCAAGTATACTCTCAGCTCGAACCATTGAGTTAAACTTAGTGACCGAGTTTGATGTGAGCGACCAAGCAAGACCGTTTGGTATTGGTCGTGGTATTTACTTTGCGAACCCACGAAGCACCTTTACGTCTATCAGTCGGTATTATGCGGTACAAGACGTATCGAGTGTGCGTAATGCTGAGGATATGACAGCCCATGTCCCTAACTATATCCCAAATGGGGTCTTTAGTATTCATGGGTCTAACACAGAGAACTTCTGTACGGTGCTTACTAAGGGTGCTCCAAGTAAGATTTTCATATACAAATACTTATATACGGATGAGCAATTACTCCAACAGTCTTGGTCACATTGGGATTTAGGTGAGGAGTGTACTATCTTGGCTTGTACAACTATTGGTAGTAAGATGACGATTATATTTGAGAATCAACATAACGTGTTCGTAGGGACAGTAAGATTCACAAGAGACATCAAGGACTTCCCACAGGAACCTTATCGGTCTCACCTTGATTTGAAGACCCTTTACACAATTCCAACCGATAAATATAATATCACAACGAACATCACACGGATTCGTCTAGCTGATATTTATAACAGTGCAAGATTCACAAGAGGTAAAGTCACCTTAATGGGTGTTGATGGTCGAAACTTTGAGTTCCAACCGAAAGAGGGCTTCTGGGCATCTGACGACACTTTGGATTTACAAGGGGATTACTCTGGGAAACAGTTCGTAGTTGGGTTCAACATTCCGTTTACTTACGAGTTTGCTAAGTTTCTCATTAAGAAAGCAGATAAAGATGGCTCAATGGTCACTGAGGATATCGGCAGGTTACAGTTGCGTCGAGCATGGGTGAACTACGAAGAATCTGGAGCGTTCAGTGTGAGAGTTGTACATGGTTCCACAAGTTTTAACTATGAGATGTCCGGCTCCAGATTGGGGTCTAGAGAACTTCATATTGGCGAACTAAACATTAGTACTGACCAATTCAGGTTCCCTGTAACAGGCAACGCTTTACACACGCAGGTGTTTCTACTTAGTGACTCACCAACACCACTAAACATTATTGGCTGTGGTTGGGAGGGTAGCTACATTCGTAGAAGTCGCTCGCTTTAA

Genome Context

Genome Context

Tertiary structure

PDB ID
1cf3cc85cb6c1441752cda98fc09f38e3bd07ab3be754428bf3c4ff45988aab0
ColabFold
Source ColabFold
Method ColabFold
Resolution 0,3276
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50