Protein

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Genbank accession
XJP11699.1 [GenBank]
Protein name
tail fiber protein
RBP type
TF
Evidence GenBank
Probability 1,00
Protein sequence
MVEKVDISLIKANASGPVVATQGGINVDTSEDDSQLTGSFDQLTGLLAINIPNIGKLQISGLPTIHSIGYGPAGGVGPSGRDGIDGLMGNDGRRGTDGCPGPRGNDGLQGKQGWVGNRGPAGPTGPTGPTGAPGNPGVLQIFIQDTDPSMDQEIEPGAIWVRP
Physico‐chemical
properties
protein length:163 AA
molecular weight: 16418,06070 Da
isoelectric point:4,42517
aromaticity:0,03067
hydropathy:-0,33067

Domains

Domains [InterPro]
DC_1829
ATT
1–75
DC_1829 DC_2298
PTHR24637
Unmapped
70–137
PTHR24637
IPR008160
STR
77–135
IPR008160
XJP11699.1
1 163
Architecture
ATT
STR
ATT 1-75 | STR 76-155 |
Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Taxonomy

  Name Taxonomy ID Lineage
Phage Erwinia phage phB78
[NCBI] 		3236633 Viruses > Duplodnaviria > Heunggongvirae > Uroviricota > Caudoviricetes
Host Erwinia amylovora
[NCBI] 		552 cellular organisms > Bacteria > Pseudomonadati > Pseudomonadota > Gammaproteobacteria > Enterobacterales

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
XJP11699.1 [NCBI]
Genbank nucleotide accession
PP942979.1 [NCBI]
CDS location
range 70759 -> 71250
strand -
CDS
ATGGTAGAGAAGGTTGATATATCGCTTATCAAGGCCAACGCATCTGGCCCTGTTGTTGCGACTCAAGGTGGGATTAACGTTGATACGTCAGAAGACGACAGCCAGCTTACCGGTTCTTTTGATCAGCTTACCGGTCTGTTAGCAATCAACATCCCCAATATTGGCAAGCTGCAAATTTCTGGGCTGCCTACGATTCATAGTATCGGTTACGGTCCTGCTGGTGGCGTAGGTCCATCTGGTCGTGACGGTATTGACGGTCTCATGGGTAACGATGGTCGTCGTGGTACTGACGGCTGTCCCGGCCCTCGTGGTAATGATGGTCTGCAAGGCAAGCAAGGCTGGGTAGGTAACAGAGGCCCTGCTGGTCCTACAGGCCCGACGGGTCCTACTGGTGCTCCTGGTAATCCTGGTGTACTGCAAATCTTCATTCAAGACACTGACCCGTCAATGGATCAAGAGATCGAACCCGGCGCCATCTGGGTACGTCCATAA

Genome Context

Genome Context

Tertiary structure

PDB ID
4a2d7e770091ff03312d7d02eae75e11a56ceeac8f44bece7f650b599e93eda3
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,7089
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50

Literature

Title Authors Date PMID Source
Complete genome sequence of Erwinia phage phB78 Yang,L.Y., Zheng,Y.Y. and Cui,B.M. 2013-12-26 — GenBank