Protein

View in Explore
Genbank accession
URG13122.1 [GenBank]
Protein name
tail fiber protein
RBP type
TF
Evidence Phold
Probability 1,00
TF
Evidence RBPdetect
Probability 0,86
Protein sequence
MASTYSSDLSLELVTTGEKAGLWGTITNTNLQLLQTAASGYVEVTLSTGNTTLSLADGDASANGKNLYIKVVGTLSGNSSLTMPASTTGGNANRVFFVEDGTTRGGAGDSWTVTLLTAGQSAATQVPLPEGATALVYSRGSVPATTLGMLEKGFTTVTAASKTAYTAVPGDQIGVDTVANIVTITLPAGAVGDEIVIMDVSASNGFGTNKCVVAPNGSEKIQGTAASIDLTTNNQSVTLFYTGANKGWQLKTNTA
Physico‐chemical
properties
protein length:255 AA
molecular weight: 25790,43540 Da
isoelectric point:4,55351
aromaticity:0,05490
hydropathy:0,08510

Domains

Domains [InterPro]
DC_1946
ATT
129–255
DC_1946
IPR027411
Unmapped
155–254
IPR027411
IPR036240
STR
161–247
IPR036240
URG13122.1
1 255
Architecture
ATT
ATT 129-255
Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Taxonomy

  Name Taxonomy ID Lineage
Phage phage 023Pt_psg01
[NCBI] 		2945965 Viruses > Duplodnaviria > Heunggongvirae > Uroviricota > Caudoviricetes
Host No host information

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
URG13122.1 [NCBI]
Genbank nucleotide accession
MW574966.1 [NCBI]
CDS location
range 45609 -> 46376
strand +
CDS
ATGGCATCAACTTATTCATCAGATTTATCATTAGAACTCGTAACGACAGGTGAAAAAGCCGGTCTATGGGGAACTATTACAAACACTAATTTACAATTATTACAAACAGCAGCATCAGGTTATGTAGAAGTAACTTTAAGCACAGGTAACACTACATTAAGTTTAGCAGATGGTGATGCAAGTGCGAATGGTAAAAACCTTTATATAAAAGTTGTAGGTACTTTATCAGGTAATTCTAGTTTAACAATGCCTGCATCAACAACAGGTGGTAATGCAAACAGAGTATTTTTTGTAGAAGATGGAACCACTAGAGGTGGAGCTGGAGATAGTTGGACAGTAACTTTACTTACAGCGGGTCAAAGTGCTGCTACTCAAGTGCCTCTTCCAGAAGGTGCAACAGCTTTAGTTTATTCTAGAGGTAGTGTACCAGCAACAACATTAGGAATGCTTGAAAAAGGATTTACAACAGTAACAGCTGCTAGTAAAACTGCATACACAGCAGTTCCAGGTGATCAAATAGGTGTAGACACTGTAGCTAATATTGTAACAATTACCTTACCTGCAGGAGCAGTAGGTGATGAAATAGTTATTATGGACGTGTCAGCATCAAATGGTTTTGGAACTAACAAATGTGTTGTAGCACCAAATGGATCAGAAAAAATTCAAGGAACAGCTGCTTCAATAGATCTTACAACAAACAATCAATCAGTTACCTTATTTTATACTGGAGCAAATAAAGGCTGGCAGTTAAAAACTAATACAGCATAG

Genome Context

Genome Context

Tertiary structure

PDB ID
e27f825be94804c415727861c71812d78304adedd317749934fdc0b97eab7c87
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,8005
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50

Literature

Title Authors Date PMID Source
Global distribution of Type-VIII Secretion System operons transferred between Myo and Podoviruses of the dominant marine bacterium SAR11 Wittmers,F., Needham,D.M., Hehenberger,E., Giovannoni,S.J. and Worden,A.Z. 2011-12 — GenBank