Protein

View in Explore

Genbank accession

WJN63118.1 [GenBank]

Protein name

tail fiber protein

RBP type

Evidence Phold

Probability 1,00

Evidence RBPdetect2

Probability 0,58

Protein sequence

MGFNVVPAPEVSGLVGAPGPQGLKGDTGATGPAGPTGPTGATGATGPTGPAGPTGPTGLTGATGATGPTGATGATGAQGPIGPTGATGPVGAPGLVWKNAWVASTAYVVNDAVTYNGSSYRVTTAHTSSAGSPPDTLVNYQLLAQKGATGATGATGATGPTGATGPQGPKGDPGAVTTVNGKTGDVTLSAADVSALPLTGGTITPPSGHGLTVYGSTDPATYFRVTDQGHPYSNSTRATFYNMGVGDTTTPFGGGKFVLGIKNASVVPTADATSGVYLWSEGGKLKLKEGSNTFNVGDAMPTTGGKFTGDFSIEGASGSYRQFSFDVGGVKRWTFQKDDVVEDGAGNGGNLRISSRNDDGSFKSTVVYADRGTGQVAVGTTVPSSSAKLTVAGSAALKDVSTAPAAASGAAIFYSEAGVGKVRQGDGTIQVIGDKTLTQVQSFGLMARHHMSGGGNIFWDNMNLSWNKRFLVAFGNGRGTGLSTGGYFQIDMPPNGTVIPVVGTSGATTSVTVANGRIPLRSIAWGSLWYKIPFGGAATSVPANFVITDYTGNQTPFDETYVLVAQVNIDGAGIPSLKLGTGEFLDHWRPLAYKNSWTSYSAGTEGVYPEPQVADGATPLYRGAGYRMGAGRMVEFKGLIKGGVATSGYDICTMPVGYRPYANHIFYLPNNAAMMRVDIYAAGGYMTVGAPGIGTINNGWVDLSTVRYPAEQ

Physico‐chemical properties

protein length:	712 AA
molecular weight:	71985,22530 Da
isoelectric point:	7,70233
aromaticity:	0,08848
hydropathy:	-0,12795

Domains

Domains [InterPro]

DC_0876
STR
4–249

DC_0876 DC_2308

IPR008160
STR
12–68

IPR008160 G3DSA:2.10.10.20 G3DSA:1.20.5.320

IPR050149
Unmapped
16–175

IPR050149

IPR036573
STR
100–136

IPR036573

cd12214
CBM
100–136

cd12214

IPR003610
CBM
100–131

IPR003610

WJN63118.1

1 712

Architecture

STR

ATT

STR

STR 4-99 | ATT 100-140 | STR 141-249 | STR 280-707 |

Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Domains [InterPro]

Domain ID	Category	Cluster	Start	End	Layer	Name	Pref Zone	Confidence	Evidence	Support
DC_0876	STR	DC_0876	4	249	Novel HMM	DC_0876	Central	Low	Positional only	94 proteins / 94 hits
IPR008160	STR	DC_0536	12	68	InterPro cluster	Collagen triple helix repeat	C-terminal	High	Text match	355 proteins / 386 hits
IPR050149	Unmapped	-	16	175	InterPro	Collagen superfamily	-	-	-	-
G3DSA:2.10.10.20	ATT	G3DSA:2.10.10.20	100	140	Merged direct domain	G3DSA:2.10.10.20	N-terminal	Low	Positional only	19 proteins / 19 hits
IPR036573	STR	IPR036573	100	136	Merged direct domain	Carbohydrate-binding module superfamily 5/12	Central	Low	Positional only	2 proteins / 2 hits
cd12214	CBM	DC_0028	100	136	InterPro cluster	ChiA1_BD	C-terminal	High	Text match	29 proteins / 44 hits
IPR003610	CBM	DC_0028	100	131	InterPro cluster	Carbohydrate binding module family 5/12	C-terminal	High	Text match	29 proteins / 44 hits
G3DSA:1.20.5.320	STR	G3DSA:1.20.5.320	147	195	Merged direct domain	G3DSA:1.20.5.320	Central	Low	Positional only	67 proteins / 67 hits
DC_2308	STR	DC_2308	280	707	Novel HMM	DC_2308	Central	Low	Positional only	26 proteins / 26 hits

Taxonomy

	Name	Taxonomy ID	Lineage
Phage	Streptomyces phage phiScoe44 [NCBI]	3038341	No lineage information
Host	No host information

Coding sequence (CDS)

Genbank protein accession

WJN63118.1 [NCBI]

Genbank nucleotide accession

OQ672748.1 [NCBI]

CDS location

range 18048 -> 20186
strand +

CDS

ATGGGGTTCAACGTAGTCCCCGCCCCCGAGGTCTCTGGCCTCGTCGGTGCGCCCGGCCCGCAGGGTCTGAAGGGTGACACCGGAGCGACTGGTCCTGCCGGTCCCACCGGCCCTACGGGTGCCACTGGCGCTACTGGCCCCACGGGTCCGGCTGGTCCGACTGGCCCGACTGGTCTGACTGGAGCTACGGGTGCCACCGGCCCTACTGGTGCAACCGGCGCAACGGGCGCTCAGGGTCCGATCGGACCGACTGGCGCGACTGGCCCGGTCGGTGCGCCTGGCCTCGTCTGGAAGAACGCCTGGGTCGCCTCGACGGCCTACGTCGTCAACGATGCGGTCACCTACAACGGCTCGTCCTACCGGGTCACCACGGCACACACGTCGTCCGCTGGCTCTCCTCCGGACACCCTGGTGAACTACCAGCTCCTCGCCCAGAAGGGCGCTACCGGCGCGACTGGTGCCACTGGAGCGACCGGCCCTACTGGTGCCACTGGCCCGCAGGGTCCGAAGGGTGACCCTGGAGCTGTCACCACCGTCAACGGCAAGACTGGCGACGTGACGCTGAGCGCCGCTGATGTGAGCGCGCTGCCTCTGACGGGTGGCACGATCACTCCCCCTTCGGGGCACGGCCTCACCGTCTACGGCAGTACGGACCCGGCGACCTACTTCCGAGTCACCGACCAGGGTCACCCGTACAGCAACAGCACGCGGGCGACGTTCTACAACATGGGCGTCGGCGACACGACCACGCCGTTCGGTGGGGGCAAGTTCGTCCTCGGGATCAAGAACGCCTCCGTGGTGCCGACGGCTGACGCGACCAGCGGGGTGTACCTGTGGTCCGAGGGCGGCAAGCTGAAGCTGAAGGAAGGCAGTAACACCTTCAACGTCGGTGACGCGATGCCGACCACGGGCGGCAAGTTCACTGGTGACTTCAGCATCGAAGGCGCATCGGGTTCCTACCGGCAGTTCAGCTTCGATGTCGGCGGCGTGAAGCGGTGGACGTTCCAGAAGGACGACGTCGTAGAGGATGGCGCTGGTAACGGCGGCAACCTCCGGATCTCCTCGCGCAACGACGACGGCTCCTTCAAGTCGACCGTCGTGTACGCGGATCGAGGGACTGGTCAGGTTGCCGTTGGCACCACGGTCCCGAGCTCGTCGGCCAAGCTGACGGTCGCTGGCTCGGCTGCGCTGAAGGACGTGAGCACCGCGCCTGCGGCTGCCTCCGGTGCCGCGATCTTCTACTCCGAGGCTGGAGTCGGCAAGGTCCGGCAAGGGGACGGCACCATCCAGGTCATCGGCGACAAGACGCTGACTCAGGTCCAGAGCTTCGGCCTCATGGCCCGTCACCACATGAGCGGTGGAGGGAACATCTTCTGGGACAACATGAACCTGTCCTGGAACAAGCGGTTCCTGGTCGCCTTCGGCAACGGTCGCGGCACGGGCCTCTCGACGGGCGGCTACTTCCAGATCGACATGCCGCCCAACGGCACGGTCATCCCGGTCGTCGGTACCTCGGGAGCCACCACCTCGGTCACGGTCGCCAACGGTCGCATCCCCCTGCGCTCGATCGCGTGGGGGTCTCTCTGGTACAAGATCCCGTTCGGTGGAGCTGCCACGTCGGTGCCCGCCAACTTCGTGATCACGGACTACACCGGCAACCAGACGCCGTTCGATGAGACCTACGTCCTGGTTGCCCAGGTCAACATCGACGGTGCTGGCATCCCTTCGCTGAAGCTGGGGACTGGCGAGTTCCTGGACCACTGGAGGCCGCTGGCCTACAAGAACTCCTGGACCTCGTACTCCGCTGGCACGGAGGGCGTGTACCCCGAGCCCCAGGTCGCGGACGGTGCGACGCCTCTCTACCGAGGCGCTGGCTACCGCATGGGCGCTGGCCGCATGGTCGAGTTCAAGGGGCTGATCAAGGGCGGCGTCGCGACCAGCGGCTACGACATCTGCACCATGCCGGTTGGCTACCGCCCCTACGCCAACCACATCTTCTACCTGCCGAACAACGCAGCGATGATGCGCGTCGACATCTACGCGGCAGGCGGCTACATGACGGTCGGCGCTCCCGGCATCGGCACCATCAACAACGGCTGGGTCGACCTCTCCACGGTCCGCTACCCGGCTGAGCAGTAA

Genome Context

Tertiary structure

PDB ID

66b7fb8e2bc6354be6c36ff944af87195fc382c86121179fb88aca14340267f2

ESMFold

Source ESMFold

Method ESMFold

Resolution 0,6341

Oligomeric State monomer

Download PDB

Model Confidence

Very high
pLDDT > 90

High
90 > pLDDT > 70

Low
70 > pLDDT > 50

Very low
pLDDT < 50

Protein

Domains

Domains [InterPro]

Domains [InterPro]

Taxonomy

Coding sequence (CDS)

Coding sequence (CDS)

Genome Context

Genome Context

Tertiary structure

Predicted Aligned Error (PAE)

Model Confidence