Protein

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Genbank accession
QIW90070.1 [GenBank]
Protein name
tail fiber protein
RBP type
TF
Evidence GenBank
Probability 1,00
TF
Evidence Phold
Probability 1,00
TF
Evidence RBPdetect
Probability 0,50
TF
Evidence RBPdetect2
Probability 0,95
Protein sequence
MSGTRAPKTIVVYDITGQTDYTIPFEYLARKFVVVTLIGQDRKVLTLNTDYRFTTKTTIGLSDPNPVGYNKIEIRRFTSATDRLVDFHDGSILRAYDLNLSQIQTLHVAEEARDLAGDSIAVDDNGDLDARGRKIVNLADAEDDTDAVNYGMLKKFDNSTFNNAQKAEASANAAKSSENKAKDSELRSIEAEAKCLASAGTAMTAAADANRSKVAAEDAEQVVVPLVPIVEKASKDAAKAAADAAQAVQDVKDLGAVPVGTIATFIKTPPAGYLKCDGSTFSQTEYPELYAYLGTNVLPNFNDRYLKQPSDEVNINQGFNAQMPDHWHDVTEHTHTRGNMEITGEFRNVNNSGTWHEMTYTSGAFHSGAPEPNCAFVQSLTPSYTGLTMAYFNASRTWTGNTSASLIKTEGINRSSLSIAIGQALEVKHHTVIFAIKAAGKVSDEGLMEVTQIKADVSDLTTRVETLEEWPQSGSNERGTWVKHQDGRMECHYQAILGFQDYTEVSGALYKGPNHFWTFPEEFIATPTVHIMGNNASNAWLFCSSAFPSTTAVTYSVFSVVRGSNIQTTIGLAAFGRWK
Physico‐chemical
properties
protein length:579 AA
molecular weight: 63179,63090 Da
isoelectric point:5,27877
aromaticity:0,08808
hydropathy:-0,33541

Domains

Domains [InterPro]
DC_0264
STR
2–576
DC_0264
IPR005604
ATT
7–130
IPR005604 SSF88874
IPR037053
ATT
255–307
IPR037053
IPR011083
ATT
260–296
IPR011083
QIW90070.1
1 579
Architecture
ATT
STR
ATT
STR
ATT 2-130 | STR 131-254 | ATT 255-307 | STR 308-576 |
Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Taxonomy

  Name Taxonomy ID Lineage
Phage Vibrio phage JSF37
[NCBI] 		2724311 Viruses > Duplodnaviria > Heunggongvirae > Uroviricota > Caudoviricetes
Host Vibrio cholerae O1
[NCBI] 		127906 Bacteria > Proteobacteria > Gammaproteobacteria > Vibrionales > Vibrionaceae > Vibrio

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
QIW90070.1 [NCBI]
Genbank nucleotide accession
MT215167.1 [NCBI]
CDS location
range 7672 -> 9411
strand +
CDS
ATGTCAGGCACTCGTGCTCCTAAGACTATTGTGGTTTATGATATCACAGGTCAAACAGACTATACGATTCCATTCGAGTACCTTGCTCGTAAGTTCGTAGTGGTCACTCTTATTGGTCAAGACCGTAAGGTTCTGACTTTAAATACCGACTATCGGTTTACTACAAAGACAACTATCGGTTTATCAGACCCAAATCCAGTAGGTTACAATAAGATTGAGATTCGTCGATTCACTTCAGCTACTGACCGTCTGGTAGATTTCCATGATGGTTCTATTCTTCGTGCTTACGATTTGAACCTCTCACAGATTCAAACTCTTCATGTTGCTGAAGAAGCTCGTGACCTTGCAGGTGACTCTATTGCTGTTGATGATAACGGAGACTTAGATGCTCGTGGTCGTAAGATTGTTAACCTTGCAGATGCAGAGGATGATACCGATGCAGTGAACTATGGGATGTTGAAGAAGTTCGATAATTCTACTTTCAACAATGCTCAAAAAGCTGAAGCTTCTGCTAATGCTGCTAAATCTTCTGAGAACAAAGCTAAAGACTCAGAGTTACGCTCTATCGAAGCTGAGGCAAAGTGTCTTGCATCTGCTGGTACAGCTATGACTGCTGCTGCTGATGCTAATCGTTCTAAAGTGGCTGCTGAAGATGCTGAACAAGTAGTCGTGCCGTTGGTTCCAATCGTAGAGAAAGCCTCTAAGGACGCTGCTAAAGCTGCTGCTGATGCTGCTCAAGCGGTACAGGATGTTAAAGACCTTGGTGCTGTGCCTGTTGGTACAATCGCTACGTTCATTAAAACGCCTCCTGCTGGTTACTTGAAGTGTGATGGTTCTACCTTCTCACAAACTGAATACCCTGAACTTTATGCTTACTTAGGGACTAACGTTCTACCTAACTTTAATGACCGCTATTTGAAACAGCCTTCTGATGAAGTAAACATTAACCAAGGGTTTAACGCTCAGATGCCTGACCACTGGCATGATGTTACAGAGCATACTCATACTCGTGGTAACATGGAGATTACTGGTGAATTTCGTAATGTGAATAACTCAGGTACTTGGCATGAAATGACATATACCAGTGGTGCTTTCCATTCTGGTGCTCCTGAGCCTAACTGTGCTTTCGTACAAAGTCTCACACCTTCATATACAGGTTTAACAATGGCTTACTTCAATGCTTCTCGTACTTGGACAGGTAATACCTCTGCTTCTTTGATTAAGACAGAAGGAATCAATCGGTCTTCCCTAAGTATCGCTATTGGACAGGCTCTGGAAGTTAAACACCATACGGTTATCTTTGCGATTAAAGCCGCTGGTAAGGTTTCTGATGAAGGTCTGATGGAAGTCACTCAGATTAAAGCTGATGTGTCGGATTTAACTACTCGTGTGGAAACTCTTGAAGAATGGCCTCAAAGTGGTTCTAATGAAAGAGGTACTTGGGTAAAACATCAAGATGGTCGTATGGAATGTCATTATCAAGCTATTCTTGGTTTTCAAGATTATACAGAGGTAAGTGGAGCTTTATATAAAGGTCCTAACCACTTTTGGACATTTCCTGAAGAGTTCATTGCTACACCTACGGTGCATATCATGGGTAACAACGCATCGAATGCTTGGTTATTCTGTTCTTCTGCCTTTCCATCAACTACAGCAGTAACTTATAGTGTTTTCTCAGTGGTTAGAGGCTCTAATATTCAAACCACAATCGGATTAGCTGCATTTGGACGTTGGAAATAA

Genome Context

Genome Context

Tertiary structure

PDB ID
665c1431df8b254fe9ae40cab8ecb77326844f4cabcce7917f679ad3790ae5fb
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,7301
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50