Protein

View in Explore
Genbank accession
WLW41108.1 [GenBank]
Protein name
tail fiber protein
RBP type
TF
Evidence Phold
Probability 1,00
TSP
Evidence DepoScope
Probability 1,00
TSP
Evidence RBPdetect
Probability 0,91
TSP
Evidence RBPdetect2
Probability 0,95
Protein sequence
MDQDIKTIIQYPTGASEYDIPFDYLSRKFVRVSLVSDDNRRLLSNITEYRYVSKTRVKILADTTGFDRVEIRRFTSASERVVDFSDGSVLRANDLNVSQLQSSHIAEEARDSALLAMPEDDAGNLDARNRKIVRLAPGEIGTDAVNKDQLDTTLGEAGGILSEIKQTQQDIGDYIEEFANGTTYLKNIVMVYNQGSANGGETSIVLDRTDEVFAVPVIYINGDRQEVGFQFSYNNTNKTITLVKPLKRGDFVVMLTSEGTHSLASILAGPDGASRIGAAGGLTVQQAIDRILENRIILPQWFGARGDWSDATNTGTDDTAAFEAAIEMAVTLNYTEVFVPAGSYLITRELNLNGGNRNTRLGARIRGAGWASSVLVFKAPTAETPCISIIGTPGGHTSKGVEKLLIKSHPSTTGQGIGILCRNTCFAHVTEFLIANMNIGIRLENYMTAGSFTEFCYFTNGRLFTNNINIQFNKVQAGDNSFHGSNFKNVQNQVKKNGGIGVQIMGNTQGSAYLYNMTWDMQFFGGAGCIAMDLNYCNTDYVGGKLTGEADLTFKADGNSRFDFHGRFDSIGKVIWDTATEGARTGGTYVFANRTSLENAVMTNADAGRLPAGVVARPLPADWADRGNNGVYPATFHIRGPNIESMGFVTYNSPGNGFYFGQLPFQGNIKDFNPSFWFNSGGTRFNTAATAYTMMLSNGAGLHFSDTTIRALSDGNVSLGEYNRRFKEARLTSWDIGTNIVPTSTASKDIGSNTNRVRDIYLANSPNVTSDSRKKSFVKPIDEALLDAWETIPFSQWKLNEAIAEKGGEARWHVGYIAQKVEEALQAVGLNAAEYGLLTIGDDGYMLRMEECLVVEAAMIRRKLGLTYK
Physico‐chemical
properties
protein length:869 AA
molecular weight: 95054,45190 Da
isoelectric point:5,48896
aromaticity:0,09551
hydropathy:-0,26295

Domains

Domains [InterPro]
DC_0778
STR
1–791
DC_0778
IPR005604
ATT
4–127
IPR005604 IPR012334 IPR036388
IPR011049
STR
126–153
IPR011049 IPR011050 IPR030392
cd10144
CHP
770–863
cd10144
IPR030392
CHP
770–869
IPR030392
WLW41108.1
1 869
Architecture
ATT
STR
RBD
CHP
ATT 1-127 | STR 128-791 | RBD 792-842 | CHP 843-869
Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Tail Spike Domain Segmentation

Tail Spike Domain Segmentation

This protein has been segmented into three structural domains: N-terminal, central domain, and C-terminal.

Domain Layout
N-terminal
Central
C-terminal
WLW41108.1
1 869
Domain Start End Length (AA) Confidence
N-terminal 1 306 306 0,9960
Central domain 307 611 306 0,9762
C-terminal 612 869 257 0,8956
Legend: N-terminal Central domain C-terminal
3D Structure with Domain Coloring

The structure is colored according to the domain segmentation: N-terminal (blue), Central (green), C-terminal (pink).

Domain Coloring
N-terminal
1-306
Central
307-611
C-terminal
612-869

Taxonomy

  Name Taxonomy ID Lineage
Phage Serratia phage KKP 3708
[NCBI] 		3041362 Uroviricota > Caudoviricetes > Autographivirales > Studiervirinae > Przondovirus
Host Serratia liquefaciens
[NCBI] 		614 cellular organisms > Bacteria > Pseudomonadati > Pseudomonadota > Gammaproteobacteria > Enterobacterales

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
WLW41108.1 [NCBI]
Genbank nucleotide accession
OR067836.1 [NCBI]
CDS location
range 33324 -> 35933
strand +
CDS
ATGGACCAAGATATCAAAACAATCATTCAGTATCCTACGGGAGCCTCGGAGTATGATATTCCGTTCGACTACCTGTCCCGTAAGTTTGTCCGTGTGTCTCTGGTATCAGATGACAACCGCCGCCTACTGAGTAACATCACTGAGTACCGCTATGTGTCAAAGACTCGCGTCAAGATTCTCGCGGACACCACTGGGTTCGACCGTGTGGAAATCCGACGGTTCACCTCTGCGTCCGAACGTGTTGTAGACTTCAGCGATGGCTCTGTGCTGCGTGCCAACGACCTTAACGTGTCACAGTTACAGTCTTCACATATTGCCGAAGAGGCCCGCGACAGTGCGCTTCTGGCCATGCCTGAGGATGACGCTGGGAACCTCGATGCGCGAAACCGTAAGATTGTCCGACTGGCTCCCGGTGAGATTGGCACCGATGCTGTGAACAAGGACCAGTTAGATACAACTCTGGGCGAGGCTGGCGGTATTCTGTCTGAGATTAAACAGACCCAGCAGGACATCGGGGATTACATCGAAGAGTTTGCCAACGGTACGACTTACCTTAAGAACATCGTAATGGTGTATAACCAAGGGTCTGCCAACGGTGGCGAAACCTCAATCGTACTCGACAGGACTGATGAAGTATTTGCTGTCCCGGTGATTTACATTAACGGCGACCGACAGGAAGTAGGGTTCCAGTTCTCCTACAACAACACCAACAAGACGATTACTCTCGTTAAGCCACTCAAACGTGGTGACTTTGTCGTCATGCTAACATCTGAGGGTACACACTCTCTGGCCTCCATTTTGGCTGGTCCTGATGGTGCAAGTCGTATTGGTGCAGCTGGTGGGCTTACTGTTCAACAGGCTATCGACCGTATCCTTGAGAACCGCATAATCCTCCCTCAGTGGTTCGGTGCGCGTGGTGACTGGAGCGATGCGACCAATACGGGTACGGATGACACAGCGGCCTTTGAGGCAGCTATCGAGATGGCGGTCACCTTGAACTACACCGAGGTATTCGTGCCAGCTGGTTCCTACCTGATTACCCGTGAGTTAAACCTCAATGGTGGTAACCGTAATACCCGACTCGGTGCTCGTATCCGTGGTGCAGGCTGGGCTTCCTCAGTGTTGGTATTTAAGGCACCGACAGCAGAGACCCCGTGTATCTCCATTATCGGGACTCCGGGCGGCCACACGTCCAAAGGTGTTGAGAAGCTACTCATCAAGTCGCACCCATCGACCACTGGTCAGGGTATCGGCATCCTGTGTCGTAACACTTGCTTCGCCCACGTGACTGAGTTCCTGATTGCCAACATGAACATTGGCATCCGTCTGGAGAACTACATGACCGCAGGTTCATTCACTGAGTTCTGCTACTTCACGAATGGTCGTCTGTTCACTAACAATATCAACATTCAGTTCAACAAGGTTCAAGCGGGCGACAACTCGTTCCACGGGTCTAACTTTAAGAACGTACAGAACCAAGTCAAGAAGAATGGTGGTATCGGTGTGCAAATCATGGGGAATACTCAGGGTTCAGCCTACTTGTACAACATGACGTGGGACATGCAGTTCTTTGGTGGCGCTGGTTGTATCGCTATGGACCTGAACTATTGCAACACTGACTATGTTGGCGGTAAGCTGACTGGCGAGGCAGACCTAACGTTCAAAGCTGATGGTAACTCTCGGTTCGACTTCCATGGGCGTTTCGACTCTATTGGTAAAGTCATCTGGGACACTGCGACAGAAGGCGCTCGCACGGGTGGTACCTATGTGTTTGCCAACCGTACATCCCTTGAGAATGCGGTAATGACTAATGCTGATGCTGGTCGTCTGCCTGCTGGTGTGGTGGCTCGTCCCCTTCCGGCTGATTGGGCTGACCGTGGCAATAACGGCGTGTATCCGGCAACGTTCCACATCCGTGGCCCCAACATCGAGTCCATGGGGTTCGTTACGTACAACTCACCGGGCAACGGGTTCTATTTCGGGCAGCTGCCGTTTCAAGGTAACATCAAGGACTTCAACCCTAGCTTCTGGTTCAACTCCGGTGGCACCCGCTTCAACACAGCGGCCACAGCGTACACCATGATGCTTAGTAACGGCGCTGGGCTGCACTTCTCCGACACAACCATCCGTGCGCTTAGCGATGGTAACGTGTCTCTCGGTGAGTATAACCGACGCTTCAAAGAAGCACGTCTTACCTCGTGGGACATTGGCACTAACATCGTTCCAACCTCGACAGCCTCCAAGGATATTGGGTCTAATACCAACCGTGTTCGAGACATCTATCTGGCTAACTCACCTAACGTTACCTCTGACTCCCGCAAGAAGTCTTTCGTCAAACCTATTGATGAAGCCCTGCTGGATGCTTGGGAGACCATTCCGTTCTCTCAGTGGAAACTCAACGAGGCAATCGCTGAGAAAGGTGGTGAGGCACGCTGGCACGTGGGTTACATTGCACAGAAGGTTGAGGAAGCGCTTCAAGCAGTCGGCCTGAACGCTGCCGAGTATGGCTTATTAACCATCGGTGACGACGGATATATGTTGCGTATGGAAGAATGCTTGGTGGTAGAGGCAGCTATGATTCGCCGTAAACTTGGCTTAACCTATAAATAA

Genome Context

Genome Context

Tertiary structure

PDB ID
0eed0829ffe42714a0e5bbc58eb209024bec7d78eda490eb02839b15ad5546ac
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,7084
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50

Literature

Title Authors Date PMID Source
Genome analysis of newly isolated bacteriophages Wojcicki,M., Swider,O., Srednicka,P. and Shymialevich,D. 2013 — GenBank