Protein

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Genbank accession
AGH31543.1 [GenBank]
Protein name
tail fiber protein
RBP type
TF
Evidence UniProt/TrEMBL
Probability 1,00
TF
Evidence Phold
Probability 1,00
TSP
Evidence DepoScope
Probability 1,00
TSP
Evidence RBPdetect
Probability 0,55
TF
Evidence RBPdetect2
Probability 0,95
Protein sequence
MAIRKPSEYFDREKASVENVIQGSIENPELNTISDAYDAFKRNLSKVDVLTDFSETLGNYQSNIEKVNHLSEKIDEIDGDIKNLLTKEDLDKALVSQLLFLEECIRDVQEKVKGINQKNLTQVKLDVSSLSETVNTFIDDELPRYEKLVSDSEIRLTNRCEVLEEELKETLDNIKDVVDEKYVQDFNSLNEELGRIKKNDIPKYKNLIVDSEIKTDSKIKEFAEFLDNTVNDVVSKIELVKEDNTEIFDTLNSKVSEVNQIHDLMLEDIEKSETTRDELDKKVVDLKIEILRNESHIENQNKSIETIHEDVKSAIDKLSIEEIQKNNSRLASKVKYIEEVFEKFNEKEILNESIITEPSSSDNSDPLTPLDQKFVTLDQLQSHYRLFVNRIQQQLSSLGGGGETKLKYLDDIVGIATNASAYNGKFLKYDHSIEKFEFVTVSGGGGGSQTLDETLQLGDTSTRGMSVGVVTSTKLHVDPVGSGVTYSEDLVVVGNGRVTGILSIGTSSIVLDSNNNSITGTGNLNISGVSTFSGDVTITSTGNLILDSNGTQKVIFKDSSIDGLELAYYTNGDYLSIQKSSNTHSLLRAYRDGGQIELYYSNAKKLETTGIGISVFNGASDTATIAGPSNLIIDPGVVGDNTGIVRIKGDLYVDGTETFVNSTTVEIADKVIGIATTCTSNLLTDGAGIGIGSDKTFLYEFNSGTNPSLKSSENLNVLTGKGYQVNQVEVLNATTLGSSVVNSSLTSVGTLSALTVGGDLSIADKIIHDGDTDTAIRFPAADTVAVETAGAERLRITSAGNVGIGTDNPQGILHVSSGTSGDATLILEADTDNNDETDNPNIVFRQDGALDLGSIGMNLTNSSSIGPSNALYLATSSGDAAIVFATGTTNGYTNATERLRITSTGNVGINSTSPSEKLDVIGTVKATTFSGNLPTTDLTGTITNAQLAGSIANSKLANDSVSYGGVSLDLGASDATPAFDLSDATNYPTSSLSGTISAAQLANTSVSAGSYTNSDITVDAQGRITAASNGSGGGGATAIKCAIYKDATGGENFNATTATRISNIDDAASFNDAIFSESGGVYTINETGVYEVNIEFCLNGTTGSNYRYTGELDMRLNSDTGTLLARVHDGYIRRTSNANQTAFNLNTIESFTTGDNFRFTLRRTNINTGTAITIADTCRVMIKQLST
Physico‐chemical
properties
protein length:1187 AA
molecular weight: 127275,04100 Da
isoelectric point:4,50764
aromaticity:0,05644
hydropathy:-0,28863

Domains

Domains [InterPro]
DC_2217
STR
1–277
DC_2217 DC_1386
Coil
Unmapped
67–87
Coil Coil Coil
DC_2218
STR
275–650
DC_2218
AGH31543.1
1 1187
Architecture
STR
STR 1-937 |
Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Tail Spike Domain Segmentation

Tail Spike Domain Segmentation

This protein has been segmented into three structural domains: N-terminal, central domain, and C-terminal.

Domain Layout
N-terminal
Central
C-terminal
AGH31543.1
1 1187
Domain Start End Length (AA) Confidence
N-terminal 1 470 470 0,9759
Central domain 471 687 218 0,2985
C-terminal 688 1187 499 0,8197
Legend: N-terminal Central domain C-terminal
3D Structure with Domain Coloring

The structure is colored according to the domain segmentation: N-terminal (blue), Central (green), C-terminal (pink).

Domain Coloring
N-terminal
1-470
Central
471-687
C-terminal
688-1187

Taxonomy

  Name Taxonomy ID Lineage
Phage Synechococcus phage S-SKS1
[NCBI] 		754042 Uroviricota > Caudoviricetes > Llyrvirus >
Host Synechococcus sp. WH 7803
[NCBI] 		32051 Bacteria > Cyanobacteria > Oscillatoriophycideae > Chroococcales > Synechococcus >

Coding sequence (CDS)

Coding sequence (CDS)

No CDS data available.

Genome Context

Genome Context

Tertiary structure

PDB ID
f518c89fa8a311c46459b847588346875389b83dbfe398960853ff009c52c308
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,5212
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50