Protein

View in Explore
Genbank accession
QBX24172.1 [GenBank]
Protein name
tail fiber protein
RBP type
TF
Evidence Phold
Probability 1,00
TF
Evidence RBPdetect
Probability 0,89
TF
Evidence RBPdetect2
Probability 0,91
Protein sequence
MSETISAIVVHKSMTKNEWESSDIILPQGQLVYESDTGHSKFGDGKNRYADLIYQGGPPGPPGPQGPTGKTGDQGPPGPTGQRGETGPQGPPGPPGADGKMTFEQLTPEQKQQLKGDKGDRGPKGDIGPRGLTGPQGPKGEPGINGMDGPRGATGPRGPQGPAGDPASIPDDVVRRGELAAYLLKSEYKAKGTGSGLSYKVVTQSEYDELYDYSDNELILVVEG
Physico‐chemical
properties
protein length:224 AA
molecular weight: 23323,44580 Da
isoelectric point:4,95110
aromaticity:0,05357
hydropathy:-0,91027

Domains

Domains [InterPro]
SSF69349
STR
7–224
SSF69349
PTHR24637
Unmapped
55–166
PTHR24637
IPR008160
STR
57–100
IPR008160 IPR008160
G3DSA:1.20.5.320
STR
71–118
G3DSA:1.20.5.320
QBX24172.1
1 224
Architecture
STR
STR 7-224
Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Taxonomy

  Name Taxonomy ID Lineage
Phage Streptococcus phage Javan178
[NCBI] 		2548025 Viruses > Duplodnaviria > Heunggongvirae > Uroviricota > Caudoviricetes
Host Streptococcus equi
[NCBI] 		1336 cellular organisms > Bacteria > Bacillati > Bacillota > Bacilli > Lactobacillales

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
QBX24172.1 [NCBI]
Genbank nucleotide accession
MK448862.1 [NCBI]
CDS location
range 29880 -> 30554
strand +
CDS
ATGTCAGAGACTATATCAGCTATAGTTGTGCATAAAAGCATGACAAAAAACGAGTGGGAGTCTAGTGACATCATTTTGCCACAAGGCCAGCTTGTCTATGAGTCCGATACTGGCCATAGTAAATTTGGCGACGGTAAAAATAGATATGCAGATTTGATCTATCAAGGTGGCCCACCTGGGCCACCAGGTCCCCAAGGACCAACAGGTAAAACAGGGGATCAGGGCCCACCAGGCCCTACCGGCCAACGTGGGGAAACAGGCCCACAGGGTCCACCTGGGCCACCAGGAGCGGACGGTAAGATGACCTTTGAGCAATTGACGCCAGAGCAAAAGCAACAACTAAAAGGCGACAAAGGCGACCGCGGCCCTAAAGGGGACATTGGTCCTAGAGGGCTAACGGGCCCGCAAGGCCCTAAAGGAGAGCCAGGGATAAATGGTATGGACGGTCCAAGAGGTGCAACAGGTCCCCGAGGACCGCAAGGCCCAGCTGGTGATCCAGCAAGCATACCTGATGACGTTGTCAGGCGTGGTGAGTTAGCTGCATATTTGCTTAAGTCAGAGTATAAAGCCAAAGGCACAGGATCTGGCCTAAGCTACAAAGTTGTCACTCAATCAGAGTACGACGAGTTATATGATTACAGTGACAATGAGTTGATCCTCGTTGTGGAGGGGTGA

Genome Context

Genome Context

Tertiary structure

PDB ID
70470ffabd62b2017eacb50eccf2aa8cc9b3491744400aba24161ab1a8877f97
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,7865
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50

Literature

Title Authors Date PMID Source
Prophages and satellite prophages are widespread among Streptococcus species and may play a role in pneumococcal pathogenesis Rezaei Javan,R., Ramos-Sevillano,E., Akter,A., Brown,J. and Brueggemann,A.B. 2018-12-20 — GenBank