Protein

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Genbank accession
WYD62135.1 [GenBank]
Protein name
tail fiber protein
RBP type
TF
Evidence GenBank
Probability 1,00
TSP
Evidence RBPdetect
Probability 0,90
TF
Evidence RBPdetect2
Probability 0,90
Protein sequence
MNFVVNHVPDGVPVRVFIDEIGEDNDVTEDFEALKENATFHIVESAGGGAIKGVMKIFSVILKPLAKLLSPSVKGASSNLANSQADSPNNSLTDRNNKARPYERSYDICGTVQTIPNNLMSTYKVFNAAGKIVEYGYYDAGRGYLDIHPDGITDGDTRVSDITGTSVAVYAPYTSPNNTSTPQVMVGDPIEQGLYITVESNEVDGVVLKAPNGLGISFSYMSGYPSLSGNIGTIYDPTGGSDFSGVLVPNDTFSLVSAWTNTDVDLSGGGYQVVSVSEGTVTFIVPGGLIGRWQEIRPGSFFRGDGEASLQPDNTYEKTLTDWVSINRTEVERIVANIAAANGMYKDNGKSKTLASVTAEIQYQLLDENSAPYGPIYTAQGTVSGRTPDYNGVTIYADLPVVSRVRVRARRVTDLDFNFEGSVVDEITYVNLYGQTRDNTPHYGNRTTVHSMRKQTPRAAEVKQPQLRMIATEMVYKYLGNGVFEDTRTPNTQAVQSLIRLARDPDVGGLNLTVRNMDKLLAVQKEIEDYFGDKQAGEFCYTFDDYKTTMQDIVSTIADAIFCTPYRKGADILLDFERPRMGPEMVFTHRSKAGTSEKWTRTFNDSQVFDSLKFSYIDPKTNVKETITIPETGGVKTETYDSKGIRNYKQAFWAAHRRHQKNILKKISVSFTATEEGIFALPNRAVSVVKGSRMSTYDGYVTAVNGLTVELSQPVKFTSGDDHYLVLKLRDGGVQSVRVVPGAHDRQVIMTSVPQEAIYTGNSALKTEFSFGNEARHNAQMILVSTVDPGDDRTVKITGFNYDKDFYKFDNVPPFGRAFSNGFDNGFN
Physico‐chemical
properties
protein length:828 AA
molecular weight: 91101,75460 Da
isoelectric point:5,30572
aromaticity:0,09783
hydropathy:-0,36534

Domains

Domains [InterPro]
DC_0118
STR
1–661
DC_0118 DC_0808
NF040662
Unmapped
328–808
NF040662
WYD62135.1
1 828
Architecture
STR
RBD
STR 1-661 | RBD 679-822 |
Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Tail Spike Domain Segmentation

Tail Spike Domain Segmentation

This protein has been segmented into three structural domains: N-terminal, central domain, and C-terminal.

Domain Layout
N-terminal
Central
C-terminal
WYD62135.1
1 828
Domain Start End Length (AA) Confidence
N-terminal 1 204 204 0,9660
Central domain 205 403 200 0,7303
C-terminal 404 828 424 0,1533
Legend: N-terminal Central domain C-terminal
3D Structure with Domain Coloring

The structure is colored according to the domain segmentation: N-terminal (blue), Central (green), C-terminal (pink).

Domain Coloring
N-terminal
1-204
Central
205-403
C-terminal
404-828

Taxonomy

  Name Taxonomy ID Lineage
Phage Salmonella phage vB_SenS_4FS1
[NCBI] 		3135707 Viruses > Duplodnaviria > Heunggongvirae > Uroviricota > Caudoviricetes
Host Salmonella sp.
[NCBI] 		599 cellular organisms > Bacteria > Pseudomonadati > Pseudomonadota > Gammaproteobacteria > Enterobacterales

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
WYD62135.1 [NCBI]
Genbank nucleotide accession
PP537413.1 [NCBI]
CDS location
range 28089 -> 30575
strand -
CDS
ATGAACTTCGTCGTGAACCACGTTCCGGACGGGGTTCCGGTACGTGTTTTCATCGACGAAATCGGAGAAGATAACGACGTAACAGAAGACTTCGAAGCACTGAAAGAAAACGCGACTTTCCACATTGTGGAATCAGCTGGTGGTGGCGCCATTAAAGGCGTCATGAAGATTTTTAGCGTTATTCTTAAACCGTTGGCGAAGCTCTTGTCGCCGTCCGTGAAAGGTGCGTCCTCGAACCTTGCGAACTCGCAGGCAGACTCCCCAAACAACAGTCTTACTGACCGCAACAACAAGGCGCGTCCGTACGAGCGCAGCTACGATATCTGCGGGACGGTACAAACAATACCCAATAACCTTATGTCTACTTATAAGGTGTTTAACGCCGCTGGTAAAATTGTAGAGTACGGCTACTACGACGCCGGGCGCGGCTACCTCGACATCCACCCGGACGGTATAACGGACGGGGATACCCGTGTATCAGATATAACAGGTACGTCGGTTGCCGTGTACGCGCCGTATACGTCACCAAATAATACATCCACACCACAGGTCATGGTTGGCGACCCGATAGAGCAAGGCCTGTACATCACCGTAGAATCTAACGAAGTAGACGGCGTGGTTCTGAAAGCACCTAACGGCCTGGGTATTTCTTTCTCTTACATGTCAGGGTATCCGTCTTTGTCAGGAAACATTGGCACTATATACGACCCAACAGGCGGCTCGGATTTTTCTGGAGTACTGGTGCCTAATGACACGTTTTCGCTGGTGTCCGCGTGGACAAATACAGACGTTGACCTGTCCGGCGGCGGGTATCAGGTAGTCAGCGTGTCCGAAGGGACTGTTACCTTTATAGTACCTGGCGGTCTCATTGGTAGGTGGCAAGAAATAAGACCGGGTTCCTTTTTCCGTGGTGACGGAGAGGCCTCGCTGCAACCAGACAACACGTATGAGAAAACTTTAACCGATTGGGTTTCAATAAACCGTACCGAAGTAGAGCGCATTGTAGCCAATATCGCCGCCGCGAATGGTATGTATAAAGACAACGGCAAATCGAAAACACTGGCGTCGGTCACCGCTGAGATACAGTACCAGTTACTTGATGAAAATAGTGCCCCTTACGGGCCGATATACACTGCGCAAGGAACCGTGTCCGGACGCACCCCGGACTACAACGGAGTCACTATCTATGCCGATCTGCCGGTTGTATCTCGTGTAAGGGTTAGGGCCCGTAGGGTTACGGACCTTGACTTCAATTTTGAAGGGTCTGTAGTCGATGAAATAACGTATGTGAACCTGTATGGACAGACGCGAGATAACACCCCGCACTACGGCAACAGAACAACCGTACACTCGATGCGCAAGCAGACACCGCGCGCTGCGGAGGTTAAGCAACCGCAGTTGCGTATGATTGCCACCGAAATGGTATACAAATACCTCGGTAATGGTGTTTTCGAAGACACGAGGACCCCTAATACTCAGGCTGTGCAATCTCTTATCCGCCTGGCACGTGACCCAGATGTGGGTGGCTTAAACCTGACAGTGCGAAACATGGACAAGTTACTTGCCGTTCAGAAAGAGATTGAAGATTATTTCGGCGACAAGCAAGCGGGGGAATTTTGCTACACGTTCGATGACTATAAAACCACTATGCAGGACATAGTTAGTACTATAGCTGACGCTATATTCTGCACCCCATATCGGAAAGGGGCGGATATCCTTCTTGATTTTGAACGCCCCCGCATGGGTCCTGAGATGGTGTTCACCCACCGAAGCAAGGCCGGTACTTCTGAAAAGTGGACCAGAACATTTAACGATTCTCAGGTTTTTGACAGCCTTAAATTCTCGTACATAGACCCTAAAACAAACGTTAAAGAAACAATAACAATACCAGAAACTGGTGGGGTTAAAACTGAGACTTATGACTCAAAAGGAATCCGCAACTATAAGCAGGCTTTCTGGGCAGCGCACCGCCGTCACCAGAAGAACATTTTAAAGAAAATTTCAGTGTCGTTTACCGCCACGGAAGAGGGTATTTTTGCCCTTCCGAATCGTGCCGTTAGTGTGGTTAAGGGTTCGCGTATGTCTACTTACGACGGCTACGTAACCGCGGTTAACGGTCTTACCGTAGAGCTATCCCAGCCGGTTAAGTTCACATCCGGAGATGACCATTATTTGGTTCTGAAGTTACGTGATGGCGGAGTCCAAAGTGTTCGTGTTGTCCCTGGCGCACATGACCGACAAGTAATTATGACGTCTGTGCCGCAAGAAGCCATTTACACTGGTAATAGCGCTTTGAAAACTGAATTTTCATTCGGCAACGAAGCAAGGCATAATGCTCAGATGATTCTTGTTTCTACGGTAGACCCTGGCGATGACAGAACAGTCAAAATAACCGGGTTTAACTATGACAAGGATTTCTATAAGTTTGACAACGTGCCTCCTTTCGGTCGTGCGTTCTCCAACGGATTCGATAACGGTTTTAACTAA

Genome Context

Genome Context

Tertiary structure

PDB ID
0433160caf87e7584696c7ff005a6534c7bbf16f740c428f7001f315ee3d83f7
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,7894
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50