Protein

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Genbank accession
BFM22929.1 [GenBank]
Protein name
tail fiber protein
RBP type
TF
Evidence Phold
Probability 1,00
Protein sequence
MYLVLLERKHDLRPLVRKDKKESGMLGNFSVFESTHDQGISDKAIIKHYEKEKALFSCFSLENSGEPTDTPNLDKPIIARDYELEWSDTSCTVPKEYQNKKCNNLRHEVLQLVDPNNKDFKNRKILIHVGNSAHDTLGCVLLGMQHDEEMIYKSSEAVKKFFDLVKDKGVNNFLFKVIDKA
Physico‐chemical
properties
protein length:181 AA
molecular weight: 20889,65070 Da
isoelectric point:6,65644
aromaticity:0,08287
hydropathy:-0,60773

Domains

Domains [InterPro]
IPR043732
STR
15–166
IPR043732
BFM22929.1
1 181
Architecture
STR
STR 15-166 |
Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Taxonomy

  Name Taxonomy ID Lineage
Phage Helicobacter phage KHP40
[NCBI] 		1204178 Uroviricota > Caudoviricetes > Schmidvirus >
Host Helicobacter pylori
[NCBI] 		210 cellular organisms > Bacteria > Pseudomonadati > Campylobacterota > Epsilonproteobacteria > Campylobacterales

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
BFM22929.1 [NCBI]
Genbank nucleotide accession
LC816585.1 [NCBI]
CDS location
range 21738 -> 22283
strand +
CDS
ATGTATTTAGTCTTACTGGAAAGAAAACACGATTTAAGGCCTCTAGTGAGAAAAGACAAGAAAGAAAGCGGCATGTTAGGAAATTTTAGCGTGTTTGAAAGCACGCACGATCAAGGCATAAGCGATAAAGCGATAATCAAACACTACGAAAAAGAAAAAGCCTTATTCAGTTGCTTTTCATTAGAAAACAGCGGAGAGCCAACAGATACGCCGAATTTAGATAAGCCGATAATAGCGAGAGATTACGAGTTAGAGTGGAGCGATACGAGTTGCACGGTGCCTAAAGAATACCAAAATAAAAAATGCAATAACTTACGCCATGAAGTGTTACAGCTAGTAGATCCCAATAACAAGGATTTTAAAAACCGAAAAATTTTAATCCATGTAGGAAACAGCGCGCATGATACTTTAGGGTGTGTTCTGTTAGGAATGCAACACGATGAAGAGATGATTTATAAAAGCAGCGAAGCGGTAAAAAAGTTTTTTGATTTAGTCAAAGACAAAGGCGTTAATAACTTTTTGTTTAAGGTGATTGATAAGGCTTAA

Genome Context

Genome Context

Tertiary structure

PDB ID
f088ae31414744aa7b2e9050cbb9c0d5bbb1b474c1af7601d34ad61418e058ad
ColabFold
Source ColabFold
Method ColabFold
Resolution 0,9556
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50

Literature

Title Authors Date PMID Source
Genome sequence of schimidvirus KHP40 Iwamoto,M., Takahashi,M. and Matsuzaki,S. 1995-01-01 — GenBank