Protein

View in Explore
Genbank accession
XQQ55853.1 [GenBank]
Protein name
tail fiber protein
RBP type
TF
Evidence Phold
Probability 1,00
Protein sequence
MIISKKTLADQAQLNKNVILWAIDIGSELALLNRPMTVSQNSENMMVEDIDDITPEEIEAGKQAIKEYCISNNIMDIYYDFLIATTQESNKLDILKEKKRYEIQSNRDKALENGIVYNGHTSQTSEKDKLNINGAVNNLMLDIQSGTNSVSETICIDINDEKVTFKPQEFLKFASMVAYNTQEITFKANVLKAKIEAAKTIEELEKIQCDDPVKTTSQKKR
Physico‐chemical
properties
protein length:221 AA
molecular weight: 25034,21930 Da
isoelectric point:4,90403
aromaticity:0,05430
hydropathy:-0,47059

Domains

Domains [InterPro]
DC_1876
STR
1–159
DC_1876
IPR025484
STR
95–203
IPR025484
XQQ55853.1
1 221
Architecture
STR
STR 1-203 |
Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Taxonomy

  Name Taxonomy ID Lineage
Phage Campylobacter phage PT14_12670_16
[NCBI] 		3410872 Viruses > Duplodnaviria > Heunggongvirae > Uroviricota > Caudoviricetes
Host Campylobacter jejuni
[NCBI] 		197 cellular organisms > Bacteria > Pseudomonadati > Campylobacterota > Epsilonproteobacteria > Campylobacterales

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
XQQ55853.1 [NCBI]
Genbank nucleotide accession
PV052266.1 [NCBI]
CDS location
range 71144 -> 71809
strand -
CDS
ATGATAATATCTAAAAAAACTCTAGCTGATCAAGCCCAGTTAAACAAAAATGTTATATTATGGGCAATTGATATAGGATCAGAGTTAGCATTACTAAATAGGCCTATGACAGTTAGCCAAAATTCAGAGAATATGATGGTTGAAGACATTGATGACATTACACCTGAAGAAATTGAGGCTGGAAAACAAGCAATTAAAGAATATTGTATATCAAATAATATTATGGATATATATTATGATTTTTTAATAGCAACTACTCAGGAAAGTAATAAATTAGATATCTTAAAAGAAAAGAAAAGGTATGAGATCCAATCAAATAGAGATAAAGCTCTAGAAAATGGAATTGTATATAATGGTCATACTTCCCAAACAAGCGAAAAAGATAAACTAAATATTAATGGAGCTGTAAATAATTTAATGCTTGATATACAAAGTGGAACTAATTCAGTTTCTGAAACCATTTGCATTGACATAAATGATGAAAAAGTAACTTTTAAACCACAGGAATTTTTAAAGTTTGCCTCAATGGTTGCATATAACACACAAGAGATTACTTTTAAAGCCAATGTTTTAAAAGCAAAAATAGAAGCAGCTAAAACAATTGAGGAACTGGAAAAAATACAATGCGATGATCCAGTCAAAACAACATCACAAAAGAAAAGATAA

Genome Context

Genome Context

Tertiary structure

PDB ID
3108f033e0b5f295683fa0d1fc1c9bfb10d1de46611e75c8a525556c876c73c6
ColabFold
Source ColabFold
Method ColabFold
Resolution 0,9000
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50

Literature

Title Authors Date PMID Source
Campylobacter and Salmonella phages isolated in the United Kingdom Mutai,I.J., Gurusinghe,A., Clarke,M., Wang,B., Connerton,P. and Bhandare,S.G. 2021-12-15 — GenBank