Protein

View in Explore
Genbank accession
USW07302.1 [GenBank]
Protein name
straight tail fiber
RBP type
TF
Evidence GenBank
Probability 1,00
TF
Evidence RBPdetect
Probability 0,88
Protein sequence
MSNNTYQHVSNESRYVKFDPTGTNFPAEITDVQAAIAAISPVGVNGVPDASSTTKGILFLATEQEVIDGTDNTKAVTPATLATRLLYPNATETVYGLTRYSTNDEAIAGVNNESSITPAKFTVALNNAFETRVSTESTNGVIKISSLPQALAGADDTTAMTPLKTQQLAVKLIAQIAPSKNAATESEQGIIQLATVAQARQGTLREGYAISPYTFMNSTATEEYKGVIKLGTQSEVNSNNASVAVTGATLNGRGSTTSMRGVVKLTTTAGSQSGGDASSALAWNADVIHQRGGQTINGTLRINNTLTIASGGANITGTVNMTGGYIQGNRIVTQNEIDRTIPVGTIMMWAADSLPSDAWRFCHGGTVSASDCPLYASRIGTRYGGNPSNPGLPDMRGLFVRGAGRGSHLTNPNVNGNDQFGKPRLGVGCTGGYVGEVQKQQMSYHKHAGGFGEHDDAGAFGNTRGSNFVGTRKGLDWDNRSYFTNDGYEIDPEWQRNDRYTLNRPELIGNETRPWNISLNYIIKVKE
Physico‐chemical
properties
protein length:527 AA
molecular weight: 56015,41450 Da
isoelectric point:6,21537
aromaticity:0,06831
hydropathy:-0,39146

Domains

Domains [InterPro]
DC_0176
STR
1–446
DC_0176
SSF69349
STR
246–326
SSF69349 IPR037053 IPR044916
G3DSA:2.10.280.10
Unmapped
246–286
G3DSA:2.10.280.10 G3DSA:2.160.30.10 SSF88874
IPR015173
STR
246–326
IPR015173 IPR011083 IPR027448
USW07302.1
1 527
Architecture
STR
ATT
STR
STR 1-329 | ATT 330-400 | STR 401-525 |
Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Taxonomy

  Name Taxonomy ID Lineage
Phage Salmonella phage GRNsp7
[NCBI] 		2959431 Viruses > Duplodnaviria > Heunggongvirae > Uroviricota > Caudoviricetes
Host Salmonella enteritidis
[NCBI] 		149539 cellular organisms > Bacteria > Pseudomonadati > Pseudomonadota > Gammaproteobacteria > Enterobacterales

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
USW07302.1 [NCBI]
Genbank nucleotide accession
ON720975.1 [NCBI]
CDS location
range 25157 -> 26740
strand -
CDS
ATGAGTAATAATACATACCAACACGTTTCTAATGAATCTCGCTATGTAAAATTTGATCCAACTGGTACAAATTTTCCAGCAGAGATTACTGATGTTCAGGCTGCCATAGCAGCCATTTCTCCTGTCGGTGTAAATGGAGTTCCTGACGCATCGTCAACAACAAAGGGAATTTTATTTCTTGCCACTGAACAGGAAGTCATCGATGGAACTGATAATACTAAAGCGGTCACACCAGCAACATTGGCAACAAGATTATTATATCCAAATGCTACTGAAACTGTTTACGGATTAACAAGATATTCAACCAATGATGAAGCAATTGCCGGAGTTAATAATGAATCTTCTATAACTCCTGCTAAATTTACTGTTGCTCTTAATAATGCCTTTGAAACGCGAGTTTCAACTGAATCAACAAATGGAGTTATTAAAATTTCATCTCTACCACAAGCATTAGCTGGTGCAGATGATACTACCGCAATGACTCCATTAAAAACACAACAGTTAGCTGTTAAATTGATTGCGCAAATTGCTCCTTCTAAAAATGCTGCTACAGAATCTGAGCAAGGTATAATTCAGTTAGCTACAGTAGCACAGGCTCGTCAGGGAACTTTAAGAGAAGGATATGCAATTTCTCCTTATACGTTTATGAATTCTACTGCTACTGAAGAATATAAAGGCGTAATTAAATTAGGAACGCAATCAGAAGTTAACTCGAATAATGCTTCTGTTGCGGTTACTGGAGCAACTCTTAATGGTCGTGGTTCTACGACGTCAATGAGAGGCGTAGTTAAATTAACTACAACCGCCGGTTCACAGAGTGGAGGCGATGCTTCATCAGCCTTAGCTTGGAATGCTGACGTTATCCACCAAAGAGGCGGTCAAACTATTAATGGAACACTTCGCATTAATAATACGCTTACAATAGCTTCAGGTGGAGCAAATATTACCGGAACAGTTAACATGACTGGCGGTTATATTCAAGGTAACCGCATCGTAACACAAAATGAAATTGATAGAACTATTCCTGTCGGAACTATTATGATGTGGGCCGCTGATAGTCTTCCTAGTGATGCTTGGCGTTTTTGCCACGGTGGAACTGTTTCAGCATCAGATTGTCCATTATATGCTTCTAGAATTGGAACAAGATATGGCGGAAACCCATCAAATCCTGGATTGCCCGACATGCGCGGTCTTTTTGTTCGTGGCGCTGGCCGTGGCTCTCATTTAACAAATCCAAATGTTAATGGTAATGACCAATTTGGTAAACCTAGATTAGGCGTAGGTTGTACTGGTGGATATGTTGGCGAAGTACAGAAACAACAGATGTCTTATCATAAACATGCTGGTGGATTTGGTGAGCATGATGATGCTGGAGCATTTGGTAATACCCGCGGATCAAATTTTGTCGGTACACGTAAAGGACTTGACTGGGATAACCGTTCATACTTCACCAACGACGGATATGAAATTGATCCAGAATGGCAACGAAATGACAGATATACATTAAATCGTCCTGAATTAATTGGAAATGAAACACGTCCATGGAACATTTCTTTAAACTACATAATTAAGGTAAAAGAATGA

Genome Context

Genome Context

Tertiary structure

PDB ID
c5083c88b31cd636fdadba983752a7a196912a29b98dce1f893ea3211ffa73ad
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,6867
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50

Literature

Title Authors Date PMID Source
Three novel Salmonella bacteriophage and their application in different food matrices Li,Y., Lv,P., Shi,D., Zhao,H., Yuan,X., Jin,X. and Wang,X. 2018-09 — GenBank