Protein

View in Explore
Genbank accession
QIG74372.1 [GenBank]
Protein name
tail fiber protein
RBP type
TF
Evidence Phold
Probability 1,00
TF
Evidence RBPdetect
Probability 0,88
Protein sequence
MSDPTIYVPSYSFSGYQATNPAKPLPAPQVDNELANISLSLTETVNALEDIRRSDGQLQNGIVTVDSFSPGLTLGFTLKGGWTLGAHYILGDGVFYLGKCYRCQVVNDATNANRPDVDSVTWVLLYSVTDLTGAMSIATYDPTGIGANVFARANHTGTQAQSTIVNLVSDLAAKADAAATASAIAAKLDTLQPFATIASAATTDLSTVTSQNVTVTGNTTITGFGTAPAGTLRRLVFSGALTLTHNATTLILPQGANVVTAAGDSLQIVSLGSGNWRVTSYQRVAGSLLTSGTAAAAAGNTAVDFTSIPSWVKRITVMVESLSTNGSSGFSIQIGDSGGVENTGYVCATGNAQTSTTEFPLTGTSGAAAGVYHGSAVLTLLNAAANTWVVSSQVARTDVLAVLTVAGSKSTSAVLDRVRVKTGNGTDTFDAGSINIVYE
Physico‐chemical
properties
protein length:439 AA
molecular weight: 44947,60420 Da
isoelectric point:4,96946
aromaticity:0,06606
hydropathy:0,18200

Domains

Domains [InterPro]

No domain annotations available.

Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Taxonomy

  Name Taxonomy ID Lineage
Phage Rhizobium phage RHph_N65
[NCBI] 		2509753 Viruses > Duplodnaviria > Heunggongvirae > Uroviricota > Caudoviricetes
Host No host information

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
QIG74372.1 [NCBI]
Genbank nucleotide accession
MN988536.1 [NCBI]
CDS location
range 39151 -> 40470
strand +
CDS
GTGAGCGATCCGACAATCTACGTTCCGAGCTATTCGTTCTCAGGCTACCAGGCGACCAATCCGGCGAAGCCTTTGCCCGCGCCGCAGGTCGACAACGAGCTCGCAAACATCTCGCTATCGCTGACAGAGACAGTCAACGCGCTCGAGGACATTCGTCGATCCGACGGCCAGCTGCAGAACGGCATCGTTACGGTCGACAGCTTCTCGCCGGGGCTGACGCTCGGCTTCACGCTAAAGGGCGGATGGACGCTCGGGGCGCATTACATCCTCGGCGACGGCGTTTTCTACTTGGGCAAATGCTACCGGTGCCAGGTCGTCAACGACGCGACGAACGCCAATCGTCCCGACGTCGACAGCGTGACGTGGGTGCTCCTGTACTCGGTGACAGACCTGACCGGCGCCATGTCGATCGCGACTTACGACCCGACCGGCATCGGCGCCAATGTGTTTGCCCGCGCCAATCACACCGGCACGCAGGCGCAATCCACGATCGTCAATCTCGTTTCGGATCTGGCCGCGAAGGCCGACGCTGCGGCGACGGCGAGTGCTATTGCCGCGAAGCTGGATACCCTTCAGCCGTTCGCGACGATTGCCTCTGCGGCCACGACCGATCTCAGCACCGTTACCAGCCAGAACGTTACCGTCACTGGCAACACGACGATAACCGGCTTTGGTACGGCTCCTGCGGGCACACTTCGCCGCCTGGTTTTCTCCGGCGCCCTGACGCTGACGCACAATGCGACGACGCTCATTCTTCCTCAAGGCGCGAACGTCGTCACCGCGGCCGGCGATAGCCTCCAGATCGTTTCTCTCGGTTCCGGCAACTGGCGCGTGACGAGTTATCAGCGTGTCGCCGGATCGCTGCTCACGTCCGGAACCGCCGCAGCCGCAGCCGGCAATACGGCTGTTGATTTCACCAGCATTCCGTCTTGGGTAAAGCGCATCACTGTCATGGTCGAAAGTCTCTCGACCAATGGGTCAAGTGGCTTTTCTATCCAGATCGGCGATAGCGGAGGGGTCGAAAATACCGGCTACGTGTGCGCGACCGGCAACGCGCAGACATCGACCACGGAATTCCCGCTAACGGGCACAAGCGGCGCCGCAGCTGGCGTATATCACGGCTCAGCTGTCCTGACCCTTCTGAATGCCGCGGCGAACACATGGGTTGTCTCGTCGCAGGTGGCGAGAACTGACGTTCTGGCGGTCCTTACGGTTGCCGGCTCCAAATCCACCTCGGCCGTTCTCGACCGCGTTCGCGTGAAAACCGGCAATGGCACTGACACTTTTGACGCCGGCTCCATCAACATCGTTTACGAATAG

Genome Context

Genome Context

Tertiary structure

PDB ID
cad36b74da5b1e16ac42b7de0f84422cff8649cccca512ec1f87f8dc68a29986
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,8319
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50

Literature

Title Authors Date PMID Source
Patterns of diversity and host range of bacteriophage communities associated with bean-nodulatin bacteria Vann Cauwenberghe,J., Santamaria,R.I., Bustos,P., Juarez,S. and Gonzalez,V. 1998-01 — GenBank