Protein

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Genbank accession
ALP47338.1 [GenBank]
Protein name
short tail fiber protein
RBP type
TF
Evidence GenBank
Probability 1,00
TSP
Evidence RBPdetect
Probability 0,61
Protein sequence
MSEFRRAFRASGLDASGQNVINVADPRANELFDGINQGYFIEENTVQEYDPTRDHYKVDFIVEFNQRLYKNITEINAPEPFDSQKWQKMRTDPEWEDTDSSVGANVGDFLLLTASSAITITLPETPLTGDTVTIKDGKGVLTTYPCTIAAAGGLTIQHYGIDGSIESKPSISFNTPNSTIFLVYNGIAWTYQINQELYNTYIDDSHPTQQGGYLSTGGYFTNVGETVTYDGSVKKIAISVPLNPNVGDTIHLKDVAYLENQTSIQIGVNPTATGQVIQDPISGERSSVISLDTIGGADITFIDDNGTGVWVITIANNPHLWNYVGDSSAVELKPRSRYAIEIADAVPAMTITLPEKPADGDWIEISHNKTAHKKVTIQVHPNFGDDDPGHGPDEYKVFLDFETYRYQKYRHYVDFVPFFVESFEISDYDSGYSLVLYYDASRKVWSFGNIATRIDIADELYRKRPGIVPLADPTEALAHGIEYAHPEDAADPWADQNPLKDHVITVETLDARRAGEQQVGMARVATLGTDEALEESRSGTFVRYPDTNFRHDLFITPRSLNARTATETRRGVVEIATQNETRSTTNDVQVLTPMKFHAAQAEEDLTGVAKLVEASNNINAGGIVTSTANMRSDRSVNGLDNTVYDKTDHLRIVTPKMLDEYRATENQPGTLWVAKSSELRINDSTVDNAIITPKKLAAWKASSTVRGIARSATQSEANATTGTGESWTTVFITPETLNSRTATESRRGVAEIATQTEVDSGTDDTRIVSPLKLKTWLDRDHFVTAGTDGLSHTGTVWGDVTFSIASATETQRGTLQVATQLEANAQAGALDDVIITPQKLNARRATETQTGIVRLATQAEVEAATASNEIVVTPSDLLHWTRYSDSSRANESRYGNVQIATPAETFVGNSTDGSTQAYTSYLRVPYAVSPYGLHYALRNYLPLNAKADDSELLDGLNSTQFARRDIDQTINGTYTFSGEFVQTKGGGYFLVANPTNDAASVKLDWFNDEPRIRVGGSGNGSSSPFSIAGTGDTTRWQVNSTGYTTQPGGASFGDTIYENEATANVDTTYGSYSSPSSGSLRQKYLGINNVAKASEKWVTARTVTFTGDLSGNFTLDGSGNVTTNIQVNDYSHAHSGENITTGTINNDRLRKSSRTNQGIVQVTSDVRTADPVNASDPHQALSAGAGKTLSERIDLFTPDGGTGESVKYRDYIQVGSVRMSTNNQGVLEFTYGHAI
Physico‐chemical
properties
protein length:1235 AA
molecular weight: 134735,44510 Da
isoelectric point:4,84140
aromaticity:0,08502
hydropathy:-0,45134

Domains

Domains [InterPro]

No domain annotations available.

Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Tail Spike Domain Segmentation

Tail Spike Domain Segmentation

This protein has been segmented into three structural domains: N-terminal, central domain, and C-terminal.

Domain Layout
N-terminal
Central
C-terminal
ALP47338.1
1 1235
Domain Start End Length (AA) Confidence
N-terminal 1 379 379 0,8224
Central domain 380 768 390 0,0847
C-terminal 769 1235 466 0,2846
Legend: N-terminal Central domain C-terminal
3D Structure with Domain Coloring

The structure is colored according to the domain segmentation: N-terminal (blue), Central (green), C-terminal (pink).

Domain Coloring
N-terminal
1-379
Central
380-768
C-terminal
769-1235

Taxonomy

  Name Taxonomy ID Lineage
Phage Vibrio phage phi-ST2
[NCBI] 		1747714 Viruses > Duplodnaviria > Heunggongvirae > Uroviricota > Caudoviricetes
Host Vibrio alginolyticus
[NCBI] 		663 cellular organisms > Bacteria > Pseudomonadati > Pseudomonadota > Gammaproteobacteria > Vibrionales

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
ALP47338.1 [NCBI]
Genbank nucleotide accession
KT919973.1 [NCBI]
CDS location
range 163717 -> 167424
strand -
CDS
ATGTCAGAATTCCGCAGAGCATTTCGTGCGTCAGGTCTTGATGCAAGTGGTCAGAATGTCATTAACGTAGCAGACCCACGAGCAAATGAATTGTTCGACGGTATTAACCAAGGCTACTTTATTGAAGAGAACACTGTTCAAGAGTATGACCCAACACGAGATCACTATAAAGTAGACTTTATCGTTGAGTTCAATCAACGTCTATACAAAAACATTACCGAAATCAATGCACCTGAACCTTTTGACTCGCAGAAGTGGCAGAAAATGCGTACCGACCCTGAATGGGAAGATACTGATTCATCGGTAGGCGCAAACGTCGGTGACTTCTTGTTGTTAACAGCAAGCTCGGCAATCACTATTACACTGCCTGAAACACCATTAACAGGTGACACAGTTACAATCAAAGACGGTAAAGGCGTTCTTACAACTTACCCTTGTACGATTGCAGCAGCGGGCGGCTTGACGATTCAACATTACGGCATTGACGGTTCAATTGAGTCTAAACCGAGTATTTCATTCAATACCCCTAACAGCACTATATTCTTAGTGTACAACGGTATTGCATGGACATATCAGATCAATCAAGAGTTATACAATACGTATATCGACGACAGTCACCCAACTCAACAGGGTGGGTACTTATCAACTGGTGGTTATTTCACTAACGTTGGCGAGACAGTCACATATGACGGTTCAGTTAAGAAAATTGCAATTTCTGTACCACTGAACCCGAACGTGGGCGATACAATTCATCTTAAAGATGTTGCGTATCTTGAGAATCAAACGTCGATTCAAATCGGTGTGAACCCGACTGCTACGGGTCAGGTTATTCAAGACCCTATTTCAGGCGAACGTAGTTCTGTTATCAGTCTTGATACTATCGGCGGCGCTGATATCACATTCATCGATGATAACGGTACTGGCGTATGGGTAATCACAATCGCGAACAACCCGCATTTATGGAACTATGTCGGGGATTCAAGCGCGGTTGAATTGAAGCCTCGTTCTCGTTACGCTATCGAAATCGCAGATGCTGTTCCTGCAATGACGATCACACTACCAGAAAAACCAGCCGATGGTGACTGGATTGAGATCTCACACAACAAAACAGCTCATAAGAAAGTAACGATTCAAGTTCACCCGAATTTCGGTGATGATGACCCAGGTCACGGCCCCGATGAATACAAAGTATTCTTGGACTTTGAAACATATCGTTATCAAAAATACCGTCATTACGTTGATTTCGTTCCATTCTTCGTTGAATCATTCGAAATTAGTGATTATGACAGCGGTTATTCACTAGTTCTATACTACGACGCGAGTCGTAAAGTATGGTCGTTCGGTAACATCGCGACTCGTATCGATATCGCTGATGAACTATACCGTAAACGCCCGGGTATCGTGCCATTAGCTGACCCAACGGAAGCTCTAGCACACGGGATTGAATATGCGCACCCTGAAGATGCAGCAGACCCTTGGGCTGATCAAAACCCACTGAAAGACCACGTAATCACGGTAGAGACGCTTGACGCTCGTCGTGCAGGTGAACAGCAAGTTGGTATGGCTCGTGTTGCTACTCTTGGAACTGATGAAGCTCTTGAAGAATCGCGTTCTGGTACGTTTGTTCGTTACCCAGATACAAACTTCAGACATGATCTGTTCATAACACCACGTAGTTTGAATGCGCGTACAGCAACTGAAACACGTCGCGGTGTAGTTGAAATCGCAACTCAAAACGAGACGCGAAGCACAACTAACGATGTTCAAGTTCTAACACCGATGAAATTCCACGCTGCACAAGCTGAAGAAGATCTAACAGGTGTTGCAAAACTAGTCGAAGCGTCGAACAACATCAATGCTGGTGGTATTGTTACATCAACAGCGAATATGCGTTCAGACCGTTCAGTAAATGGTCTTGACAATACAGTATATGATAAAACTGATCATCTGCGTATCGTAACGCCAAAAATGCTTGATGAGTATCGTGCTACAGAGAATCAACCTGGTACATTATGGGTTGCTAAGAGCAGTGAACTTCGCATCAACGACTCAACAGTTGATAACGCGATCATCACGCCTAAGAAATTAGCAGCGTGGAAAGCAAGCTCAACGGTTCGTGGTATTGCTCGTTCTGCTACACAGTCTGAAGCAAATGCAACAACAGGAACTGGTGAATCGTGGACAACAGTCTTCATCACACCAGAAACGTTGAATAGCAGAACAGCAACTGAATCACGTCGTGGTGTTGCGGAAATCGCAACTCAAACTGAAGTTGACTCAGGGACAGACGATACTCGTATTGTTTCACCACTTAAACTGAAGACATGGCTTGACCGTGATCATTTCGTGACAGCAGGAACAGATGGTCTATCGCATACTGGTACAGTATGGGGCGACGTTACATTCAGCATCGCGTCAGCGACTGAAACACAACGTGGTACACTACAAGTTGCGACTCAATTAGAAGCGAATGCCCAAGCTGGTGCGCTTGATGATGTAATCATCACACCACAGAAGTTAAATGCGCGTCGTGCTACTGAAACGCAAACCGGTATCGTGCGTCTTGCGACTCAAGCTGAAGTCGAAGCAGCGACAGCTAGTAATGAAATTGTTGTTACTCCGAGTGATTTGCTACACTGGACTCGTTACTCTGACAGCTCACGTGCAAATGAAAGTCGTTATGGTAACGTACAAATCGCAACACCAGCAGAAACATTTGTTGGTAACAGTACAGACGGTTCAACACAAGCGTATACGTCGTACTTGCGTGTTCCATATGCAGTTTCACCTTACGGTCTGCATTATGCATTGCGCAACTACTTACCGCTAAACGCTAAAGCTGATGACTCAGAATTACTAGATGGCTTGAACAGTACACAATTTGCACGTCGTGACATCGACCAAACAATCAATGGCACGTATACGTTTAGTGGCGAATTCGTGCAAACGAAAGGTGGCGGTTATTTCTTAGTTGCAAACCCAACGAACGACGCAGCGAGTGTAAAACTCGACTGGTTTAATGACGAACCTCGCATTCGTGTGGGCGGTAGTGGTAACGGGTCTTCTTCACCATTCTCAATCGCAGGGACAGGTGACACAACTCGATGGCAAGTAAACTCAACTGGTTATACGACTCAACCAGGTGGGGCATCGTTCGGTGATACAATATATGAAAATGAAGCGACTGCTAACGTTGATACAACATACGGGTCTTATTCGAGCCCGTCAAGCGGTTCACTTCGTCAGAAGTACTTGGGTATTAACAACGTAGCTAAAGCGTCTGAGAAGTGGGTTACAGCGCGTACAGTAACGTTCACCGGCGACTTGTCTGGTAACTTTACGTTAGATGGTAGCGGAAACGTTACTACAAACATTCAAGTTAATGATTACAGTCACGCTCACTCAGGTGAGAACATCACAACGGGTACAATTAACAATGATCGTCTGCGCAAATCAAGCCGCACGAATCAAGGTATTGTACAAGTAACAAGTGACGTGCGTACAGCAGACCCAGTGAATGCTTCAGACCCACACCAAGCCCTATCGGCTGGTGCTGGTAAGACTCTATCTGAGCGTATCGACTTGTTCACGCCAGACGGTGGTACAGGTGAGAGCGTTAAATACAGAGACTACATTCAAGTTGGTTCTGTAAGAATGTCAACTAATAATCAAGGCGTGTTGGAGTTTACGTACGGACACGCTATATAA

Genome Context

Genome Context

Tertiary structure

PDB ID
6ca240524ef722c17b2f3a16c7ee952bfc19f8f3482b378cbc8e8aac7f363962
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,5405
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50