Protein

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Genbank accession
WAX06348.1 [GenBank]
Protein name
hypothetical protein
RBP type
TSP
Evidence DepoScope
Probability 1,00
TSP
Evidence RBPdetect
Probability 0,90
TSP
Evidence RBPdetect2
Probability 0,92
Protein sequence
MSTIYDKTDNYSLNLYGDADPADLRDGYNGSMRTIDETLKNHLDRIDGVSASTTAAIEAQDAKIALKADKTYVDGRDRELQVNIDKKADRTYVDGALEEKADSADVYYRQDADSIFAKQADVYTKREIDRSQAAQDDMITAMNRGVDGNHSVLVSYFLSQSERLHYAVSSDGINFGHPYIRDNDEGETVRDPSCVYVNGQVYFCWTRPTEAGGGAFGKTDTIGIAQLNPTTGEIVRQIITPGVPGTSLLWAPDFYLEGERLHIIFSVKTSTQGFQPYEIHSTGDYADPSSWSTPTALGIAPYGGIDHHIIKDDAGMYHDLSADGSIISERHSKTLVGGWSGRTTVDKNWRYLEAPASYRLANGQWRVFFDGGGLQGDYNPGSNLQENDGLMFYCDFSNDLSTHGPLYPVPTAMRHCGLTLIPNDYMAAQARLEVGSGIGGAYLHNSVDINVVMDDEGHNVRALFDRFDGFGGLKNTGFGGSQKTTEGFIVENSGLYVLSASISYKCETPKTWLNAQFTCYPQRDFKNVKNLGIGGQAFMAPDDETISTVVIPATLVYLHANDQIQIRITGHDGNVTQRANNSYFTAFKVA
Physico‐chemical
properties
protein length:590 AA
molecular weight: 64864,93570 Da
isoelectric point:4,88647
aromaticity:0,10169
hydropathy:-0,43814

Domains

Domains [InterPro]
DC_2099
STR
2–291
DC_2099 DC_2187 IPR008983
IPR023296
STR
173–407
IPR023296 IPR008983
IPR023296
STR
189–386
IPR023296
WAX06348.1
1 590
Architecture
STR
RBD
STR 2-407 | RBD 420-590
Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Tail Spike Domain Segmentation

Tail Spike Domain Segmentation

This protein has been segmented into three structural domains: N-terminal, central domain, and C-terminal.

Domain Layout
N-terminal
Central
C-terminal
WAX06348.1
1 590
Domain Start End Length (AA) Confidence
N-terminal 1 167 167 0,8754
Central domain 168 451 285 0,6413
C-terminal 452 590 138 0,9302
Legend: N-terminal Central domain C-terminal
3D Structure with Domain Coloring

The structure is colored according to the domain segmentation: N-terminal (blue), Central (green), C-terminal (pink).

Domain Coloring
N-terminal
1-167
Central
168-451
C-terminal
452-590

Taxonomy

  Name Taxonomy ID Lineage
Phage Bifidobacterium phage BD811P3
[NCBI] 		2968614 Viruses > Duplodnaviria > Heunggongvirae > Uroviricota > Caudoviricetes
Host Bifidobacterium dentium
[NCBI] 		1689 cellular organisms > Bacteria > Bacillati > Actinomycetota > Actinomycetes > Bifidobacteriales

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
WAX06348.1 [NCBI]
Genbank nucleotide accession
OP172660 [NCBI]
CDS location
range 11733 -> 13505
strand +
CDS
ATGAGCACCATCTACGACAAGACCGACAATTACAGCCTTAACCTCTACGGGGATGCCGACCCGGCCGACTTGAGGGACGGTTACAACGGCTCCATGCGCACCATCGACGAGACGCTCAAAAACCATCTCGACAGGATCGACGGCGTGTCGGCCTCCACTACGGCCGCCATTGAGGCACAGGACGCGAAAATCGCGCTTAAGGCCGACAAGACCTACGTTGACGGGCGGGACCGGGAACTCCAGGTGAATATCGACAAGAAAGCCGATAGGACCTACGTGGATGGCGCACTGGAGGAAAAGGCGGACTCCGCCGACGTATATTACAGACAGGATGCGGACTCGATCTTCGCGAAACAGGCCGACGTGTACACTAAGAGGGAAATCGACAGGTCGCAGGCCGCCCAGGATGACATGATCACCGCGATGAATCGAGGCGTCGACGGAAACCACAGCGTTCTCGTATCATACTTTTTGAGCCAATCCGAACGGTTGCATTACGCCGTCTCCTCCGATGGCATCAACTTCGGACACCCGTATATCCGGGACAACGACGAGGGGGAGACGGTCCGCGACCCGTCATGCGTCTATGTGAACGGACAGGTGTATTTCTGCTGGACACGCCCCACCGAAGCCGGCGGCGGCGCTTTCGGCAAGACGGATACGATCGGCATAGCCCAGCTCAATCCCACGACCGGAGAGATCGTACGCCAGATCATCACGCCAGGCGTGCCCGGAACCTCACTGCTGTGGGCTCCCGACTTCTATCTGGAGGGTGAGAGGCTCCACATCATCTTCTCCGTCAAGACTTCCACGCAGGGATTCCAGCCGTATGAGATTCACTCGACCGGCGACTATGCGGATCCCTCGTCATGGTCGACCCCGACCGCCCTGGGTATCGCCCCATACGGTGGCATCGACCATCACATCATCAAGGATGATGCCGGAATGTATCATGACCTTTCAGCGGATGGGTCCATCATCTCCGAACGCCACAGCAAGACCCTTGTGGGGGGGTGGAGCGGCAGGACGACCGTCGACAAGAACTGGCGTTATCTCGAAGCACCCGCATCCTATCGTCTTGCGAACGGTCAGTGGAGGGTTTTCTTCGACGGAGGCGGACTCCAGGGAGACTATAATCCCGGCTCGAATCTTCAGGAAAACGATGGCCTCATGTTCTACTGCGATTTCAGCAATGACCTTTCCACGCACGGACCTCTCTACCCGGTTCCCACGGCCATGAGGCACTGCGGGCTCACCCTCATCCCCAACGATTACATGGCCGCGCAGGCGCGTCTCGAAGTGGGATCCGGAATCGGCGGAGCCTATCTTCACAATTCCGTCGACATCAATGTGGTAATGGACGACGAGGGGCATAATGTACGTGCGCTCTTCGACAGGTTCGACGGTTTCGGAGGACTCAAGAACACCGGGTTCGGAGGAAGCCAGAAAACCACCGAGGGCTTCATCGTAGAGAATTCGGGACTGTATGTGCTTTCCGCCTCCATCTCATACAAGTGCGAAACGCCCAAAACTTGGTTAAACGCACAGTTCACATGCTATCCGCAGCGTGACTTTAAGAATGTGAAGAATTTGGGTATAGGCGGACAGGCGTTCATGGCTCCCGATGACGAAACGATAAGCACCGTGGTGATTCCGGCGACGCTGGTGTATCTCCATGCCAACGATCAGATTCAAATCAGGATAACCGGCCACGACGGCAATGTGACGCAGAGGGCCAACAACTCCTACTTCACCGCGTTCAAGGTGGCTTGA

Genome Context

Genome Context

Tertiary structure

PDB ID
c351bf5ad0be152e8b860cabe9c70ff6095b988b5ba595ff6359def6f49673ab
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,8070
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50